RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
TNFAIP3-201ENST00000237289 CIRBP-AS1Q8TBR5 109 aa7.09□□□□□ -1.27
TNFAIP3-201ENST00000237289 LITAFQ99732 161 aa7.09□□□□□ -1.27
TNFAIP3-201ENST00000237289 ZNF73O43830 326 aaPredicted RBP7.09□□□□□ -1.27
TNFAIP3-201ENST00000237289 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
TNFAIP3-201ENST00000237289 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
TNFAIP3-201ENST00000237289 PLA2G2DQ9UNK4 145 aa7.09□□□□□ -1.27
TNFAIP3-201ENST00000237289 FAM236AA0A1B0GUQ0 79 aa7.09□□□□□ -1.28
TNFAIP3-201ENST00000237289 FAM236BA0A1B0GV22 79 aa7.09□□□□□ -1.28
TNFAIP3-201ENST00000237289 PRYO14603 147 aa7.09□□□□□ -1.28
TNFAIP3-201ENST00000237289 XGP55808 180 aa7.08□□□□□ -1.28
TNFAIP3-201ENST00000237289 RPL37AP61513 92 aaKnown RBP7.08□□□□□ -1.28
TNFAIP3-201ENST00000237289 H0YGX0 51 aa7.08□□□□□ -1.28
TNFAIP3-201ENST00000237289 TCL1BO95988 128 aa7.07□□□□□ -1.28
TNFAIP3-201ENST00000237289 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
TNFAIP3-201ENST00000237289 NDUFV3P56181 108 aaKnown RBP7.06□□□□□ -1.28
TNFAIP3-201ENST00000237289 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
TNFAIP3-201ENST00000237289 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
TNFAIP3-201ENST00000237289 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
TNFAIP3-201ENST00000237289 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
TNFAIP3-201ENST00000237289 TEX49A0A1B0GTD5 131 aa7.05□□□□□ -1.28
TNFAIP3-201ENST00000237289 CCDC179H3BU77 68 aa7.05□□□□□ -1.28
TNFAIP3-201ENST00000237289 SMIM11BQ8TCY0 68 aa7.05□□□□□ -1.28
TNFAIP3-201ENST00000237289 F8WEM9 126 aa7.05□□□□□ -1.28
TNFAIP3-201ENST00000237289 DHRS4-AS1Q9P1J3 65 aa7.03□□□□□ -1.28
TNFAIP3-201ENST00000237289 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
TNFAIP3-201ENST00000237289 CLEC2BQ92478 149 aa7.03□□□□□ -1.28
TNFAIP3-201ENST00000237289 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
TNFAIP3-201ENST00000237289 PRLHP81277 87 aa7.03□□□□□ -1.28
TNFAIP3-201ENST00000237289 PPDPFQ9H3Y8 114 aa7.03□□□□□ -1.28
TNFAIP3-201ENST00000237289 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.28
TNFAIP3-201ENST00000237289 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
TNFAIP3-201ENST00000237289 PANO1I0J062 215 aa7.02□□□□□ -1.29
TNFAIP3-201ENST00000237289 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
TNFAIP3-201ENST00000237289 TRACP01848 142 aa7.02□□□□□ -1.29
TNFAIP3-201ENST00000237289 EPM2AB3EWF7 344 aa7.02□□□□□ -1.29
TNFAIP3-201ENST00000237289 BCE1O60756 84 aa7.02□□□□□ -1.29
TNFAIP3-201ENST00000237289 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
TNFAIP3-201ENST00000237289 PSORS1C2Q9UIG4 136 aa7.01□□□□□ -1.29
TNFAIP3-201ENST00000237289 LAMTOR3Q9UHA4 124 aa7□□□□□ -1.29
TNFAIP3-201ENST00000237289 A0A1B0GVY2 172 aa7□□□□□ -1.29
TNFAIP3-201ENST00000237289 STARD9Q9P2P6 4700 aa7□□□□□ -1.29
TNFAIP3-201ENST00000237289 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
TNFAIP3-201ENST00000237289 IGLV6-57P01721 117 aa7□□□□□ -1.29
TNFAIP3-201ENST00000237289 KCNQ1DNQ9H478 68 aa6.99□□□□□ -1.29
TNFAIP3-201ENST00000237289 A0A1B0GX51 115 aa6.98□□□□□ -1.29
TNFAIP3-201ENST00000237289 TRIAP1O43715 76 aa6.98□□□□□ -1.29
TNFAIP3-201ENST00000237289 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
TNFAIP3-201ENST00000237289 INAFM2P0DMQ5 153 aa6.97□□□□□ -1.29
TNFAIP3-201ENST00000237289 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
TNFAIP3-201ENST00000237289 ORMDL1Q9P0S3 153 aa6.97□□□□□ -1.29
TNFAIP3-201ENST00000237289 CDK2AP2O75956 126 aa6.96□□□□□ -1.29
TNFAIP3-201ENST00000237289 SVIPQ8NHG7 77 aa6.96□□□□□ -1.29
TNFAIP3-201ENST00000237289 IGLV7-43P04211 117 aa6.96□□□□□ -1.3
TNFAIP3-201ENST00000237289 ALMS1Q8TCU4 4167 aa6.96□□□□□ -1.3
TNFAIP3-201ENST00000237289 ZNF861PO60384 105 aa6.96□□□□□ -1.3
TNFAIP3-201ENST00000237289 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
TNFAIP3-201ENST00000237289 J3KT08 172 aa6.95□□□□□ -1.3
TNFAIP3-201ENST00000237289 Q6ZRX8 168 aa6.95□□□□□ -1.3
TNFAIP3-201ENST00000237289 TRBV7-6A0A0J9YX20 115 aa6.94□□□□□ -1.3
TNFAIP3-201ENST00000237289 Q6ZQY7 126 aa6.94□□□□□ -1.3
TNFAIP3-201ENST00000237289 H3BQ85 93 aa6.94□□□□□ -1.3
TNFAIP3-201ENST00000237289 Q6ZSA8 131 aa6.94□□□□□ -1.3
TNFAIP3-201ENST00000237289 Q8NDZ9 215 aa6.94□□□□□ -1.3
TNFAIP3-201ENST00000237289 Q5VSD8 79 aa6.94□□□□□ -1.3
TNFAIP3-201ENST00000237289 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
TNFAIP3-201ENST00000237289 RBM3P98179 157 aaKnown RBP6.92□□□□□ -1.3
TNFAIP3-201ENST00000237289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.92□□□□□ -1.3
TNFAIP3-201ENST00000237289 LINC00575Q6W349 94 aa6.92□□□□□ -1.3
TNFAIP3-201ENST00000237289 IGLV9-49A0A0B4J1Y8 123 aa6.9□□□□□ -1.3
TNFAIP3-201ENST00000237289 TMEM256-PLSCR3K7ERE1 68 aa6.9□□□□□ -1.3
TNFAIP3-201ENST00000237289 DNAH7Q8WXX0 4024 aa6.9□□□□□ -1.31
TNFAIP3-201ENST00000237289 CDIP1Q9H305 208 aa6.9□□□□□ -1.31
TNFAIP3-201ENST00000237289 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
TNFAIP3-201ENST00000237289 CRYGAP11844 174 aa6.88□□□□□ -1.31
TNFAIP3-201ENST00000237289 UBL5Q9BZL1 73 aa6.88□□□□□ -1.31
TNFAIP3-201ENST00000237289 H3BT86 120 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 ATOX1O00244 68 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 C14orf132Q9NPU4 83 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 VPS13DQ5THJ4 4388 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 CSMD3Q7Z407 3707 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 KRTAP7-1Q8IUC3 87 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 A0A0U1RQV1 116 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 LST1O00453 97 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 DSCR8Q96T75 97 aa6.87□□□□□ -1.31
TNFAIP3-201ENST00000237289 ACYP1P07311 99 aa6.86□□□□□ -1.31
TNFAIP3-201ENST00000237289 Q9BRP9 147 aa6.86□□□□□ -1.31
TNFAIP3-201ENST00000237289 H0Y9J4 135 aa6.86□□□□□ -1.31
TNFAIP3-201ENST00000237289 UQCRQO14949 82 aa6.86□□□□□ -1.31
TNFAIP3-201ENST00000237289 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
TNFAIP3-201ENST00000237289 LINC00643Q86TS7 51 aa6.85□□□□□ -1.31
TNFAIP3-201ENST00000237289 Q8N1X5 172 aa6.85□□□□□ -1.31
TNFAIP3-201ENST00000237289 J3QL48 77 aa6.85□□□□□ -1.31
TNFAIP3-201ENST00000237289 C3orf22Q8N5N4 141 aa6.85□□□□□ -1.31
TNFAIP3-201ENST00000237289 SPRR1AP35321 89 aa6.85□□□□□ -1.31
TNFAIP3-201ENST00000237289 BRK1Q8WUW1 75 aa6.85□□□□□ -1.31
TNFAIP3-201ENST00000237289 ST20-AS1Q8NBB2 130 aa6.84□□□□□ -1.31
TNFAIP3-201ENST00000237289 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
TNFAIP3-201ENST00000237289 HRCT1Q6UXD1 115 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms