RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 ST20-AS1Q8NBB2 130 aa11.58□□□□□ -0.56
SLC1A4-201ENST00000234256 NSD1Q96L73 2696 aaPredicted RBP11.57□□□□□ -0.56
SLC1A4-201ENST00000234256 F8WDY8 70 aa11.57□□□□□ -0.56
SLC1A4-201ENST00000234256 ELOF1P60002 83 aaKnown RBP11.57□□□□□ -0.56
SLC1A4-201ENST00000234256 HCG22E2RYF7 251 aa11.57□□□□□ -0.56
SLC1A4-201ENST00000234256 H0Y9P7 68 aa11.56□□□□□ -0.56
SLC1A4-201ENST00000234256 CRYGAP11844 174 aa11.56□□□□□ -0.56
SLC1A4-201ENST00000234256 Q6ZRP5 223 aa11.55□□□□□ -0.56
SLC1A4-201ENST00000234256 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
SLC1A4-201ENST00000234256 TRBV7-6A0A0J9YX20 115 aa11.54□□□□□ -0.56
SLC1A4-201ENST00000234256 LOC400499M0QZD8 3231 aa11.53□□□□□ -0.56
SLC1A4-201ENST00000234256 TM2D3Q9BRN9 247 aa11.53□□□□□ -0.56
SLC1A4-201ENST00000234256 PRR15LQ9BU68 103 aa11.53□□□□□ -0.56
SLC1A4-201ENST00000234256 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
SLC1A4-201ENST00000234256 CHTF8P0CG12 524 aa11.52□□□□□ -0.57
SLC1A4-201ENST00000234256 MUC3AQ02505 3323 aa11.51□□□□□ -0.57
SLC1A4-201ENST00000234256 VPREB1P12018 145 aa11.51□□□□□ -0.57
SLC1A4-201ENST00000234256 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
SLC1A4-201ENST00000234256 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
SLC1A4-201ENST00000234256 Q6ZRX8 168 aa11.5□□□□□ -0.57
SLC1A4-201ENST00000234256 MDFIQ99750 246 aa11.5□□□□□ -0.57
SLC1A4-201ENST00000234256 FAM168BA1KXE4 195 aa11.49□□□□□ -0.57
SLC1A4-201ENST00000234256 H3BNG1 76 aa11.49□□□□□ -0.57
SLC1A4-201ENST00000234256 DMXL1Q9Y485 3027 aa11.49□□□□□ -0.57
SLC1A4-201ENST00000234256 Q8NBF4 154 aa11.48□□□□□ -0.57
SLC1A4-201ENST00000234256 C1orf195Q5TG92 126 aa11.48□□□□□ -0.57
SLC1A4-201ENST00000234256 LINC00476Q8WZB0 136 aa11.48□□□□□ -0.57
SLC1A4-201ENST00000234256 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
SLC1A4-201ENST00000234256 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
SLC1A4-201ENST00000234256 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
SLC1A4-201ENST00000234256 C9orf129Q5T035 196 aaKnown RBP11.46□□□□□ -0.57
SLC1A4-201ENST00000234256 C1orf64Q8NEQ6 169 aa11.46□□□□□ -0.57
SLC1A4-201ENST00000234256 PMAIP1Q13794 54 aa11.46□□□□□ -0.58
SLC1A4-201ENST00000234256 LOC110117498A0A087WWA1 95 aa11.45□□□□□ -0.58
SLC1A4-201ENST00000234256 SERTAD4-AS1Q5TG53 156 aa11.45□□□□□ -0.58
SLC1A4-201ENST00000234256 USP34Q70CQ2 3546 aa11.45□□□□□ -0.58
SLC1A4-201ENST00000234256 KRTAP10-3P60369 221 aa11.44□□□□□ -0.58
SLC1A4-201ENST00000234256 MOBPQ13875 183 aa11.44□□□□□ -0.58
SLC1A4-201ENST00000234256 SPINK1P00995 79 aa11.43□□□□□ -0.58
SLC1A4-201ENST00000234256 C4orf26Q17RF5 130 aa11.43□□□□□ -0.58
SLC1A4-201ENST00000234256 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
SLC1A4-201ENST00000234256 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
SLC1A4-201ENST00000234256 LRBAP50851 2863 aa11.42□□□□□ -0.58
SLC1A4-201ENST00000234256 EPM2AB3EWF7 344 aa11.4□□□□□ -0.58
SLC1A4-201ENST00000234256 PRR34Q9NV39 138 aa11.39□□□□□ -0.59
SLC1A4-201ENST00000234256 A0A0G2JQZ4 141 aa11.38□□□□□ -0.59
SLC1A4-201ENST00000234256 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
SLC1A4-201ENST00000234256 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
SLC1A4-201ENST00000234256 WDFY3Q8IZQ1 3526 aa11.37□□□□□ -0.59
SLC1A4-201ENST00000234256 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
SLC1A4-201ENST00000234256 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
SLC1A4-201ENST00000234256 DNAH10OSP0CZ25 163 aa11.36□□□□□ -0.59
SLC1A4-201ENST00000234256 STAB2Q8WWQ8 2551 aa11.36□□□□□ -0.59
SLC1A4-201ENST00000234256 KRTAP1-3Q8IUG1 177 aa11.35□□□□□ -0.59
SLC1A4-201ENST00000234256 KRTAP10-11P60412 298 aa11.35□□□□□ -0.59
SLC1A4-201ENST00000234256 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 CR1P17927 2039 aa11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 UTP20O75691 2785 aaKnown RBP11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 IGKV2D-30A0A075B6S6 120 aa11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 C16orf90A8MZG2 172 aa11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 IGKV2-30P06310 120 aa11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 C15orf56Q8N910 161 aa11.34□□□□□ -0.59
SLC1A4-201ENST00000234256 BCE1O60756 84 aa11.33□□□□□ -0.6
SLC1A4-201ENST00000234256 SPACA4Q8TDM5 124 aa11.33□□□□□ -0.6
SLC1A4-201ENST00000234256 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
SLC1A4-201ENST00000234256 NBDYA0A0U1RRE5 68 aa11.32□□□□□ -0.6
SLC1A4-201ENST00000234256 K7EQZ3 153 aa11.31□□□□□ -0.6
SLC1A4-201ENST00000234256 K7ERS5 55 aa11.31□□□□□ -0.6
SLC1A4-201ENST00000234256 RPS28P62857 69 aaKnown RBP11.31□□□□□ -0.6
SLC1A4-201ENST00000234256 DCHS1Q96JQ0 3298 aa11.3□□□□□ -0.6
SLC1A4-201ENST00000234256 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
SLC1A4-201ENST00000234256 KCNQ1DNQ9H478 68 aa11.3□□□□□ -0.6
SLC1A4-201ENST00000234256 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
SLC1A4-201ENST00000234256 ITPR2Q14571 2701 aa11.29□□□□□ -0.6
SLC1A4-201ENST00000234256 IGLV1-50A0A075B6I6 118 aa11.28□□□□□ -0.6
SLC1A4-201ENST00000234256 KRTAP1-1Q07627 177 aa11.28□□□□□ -0.6
SLC1A4-201ENST00000234256 Q8N377 158 aa11.28□□□□□ -0.6
SLC1A4-201ENST00000234256 ASPMQ8IZT6 3477 aa11.27□□□□□ -0.61
SLC1A4-201ENST00000234256 ZANQ9Y493 2812 aa11.27□□□□□ -0.61
SLC1A4-201ENST00000234256 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
SLC1A4-201ENST00000234256 K7EIL1 84 aa11.26□□□□□ -0.61
SLC1A4-201ENST00000234256 A0A1B0GW54 56 aa11.25□□□□□ -0.61
SLC1A4-201ENST00000234256 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
SLC1A4-201ENST00000234256 RTL8CO15255 209 aa11.24□□□□□ -0.61
SLC1A4-201ENST00000234256 SPAG11AQ6PDA7 123 aa11.24□□□□□ -0.61
SLC1A4-201ENST00000234256 PRO0628Q9UI54 55 aa11.22□□□□□ -0.61
SLC1A4-201ENST00000234256 IGFL1Q6UW32 110 aa11.2□□□□□ -0.62
SLC1A4-201ENST00000234256 ERC2-IT1O76042 136 aa11.19□□□□□ -0.62
SLC1A4-201ENST00000234256 TP53AIP1Q9HCN2 124 aa11.17□□□□□ -0.62
SLC1A4-201ENST00000234256 HIVEP1P15822 2718 aa11.16□□□□□ -0.62
SLC1A4-201ENST00000234256 LIMD2Q9BT23 127 aa11.16□□□□□ -0.62
SLC1A4-201ENST00000234256 FLG2Q5D862 2391 aaPredicted RBP11.15□□□□□ -0.63
SLC1A4-201ENST00000234256 ANAPC11Q9NYG5 84 aa11.14□□□□□ -0.63
SLC1A4-201ENST00000234256 A0A1W2PNM2 257 aa11.12□□□□□ -0.63
SLC1A4-201ENST00000234256 KLKP1Q107X0 134 aa11.12□□□□□ -0.63
SLC1A4-201ENST00000234256 A8MWP4 228 aa11.12□□□□□ -0.63
SLC1A4-201ENST00000234256 H7BZZ5 65 aa11.12□□□□□ -0.63
SLC1A4-201ENST00000234256 LAMA5O15230 3695 aa11.1□□□□□ -0.63
SLC1A4-201ENST00000234256 A8MUN3 132 aa11.09□□□□□ -0.63
SLC1A4-201ENST00000234256 OBSCN-AS1Q96MR7 158 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms