RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 Q6ZQT0 140 aa6.55□□□□□ -1.36
MDH1-201ENST00000233114 DEFB131BA0A096LNP1 70 aa6.55□□□□□ -1.36
MDH1-201ENST00000233114 DNAH10OSP0CZ25 163 aa6.55□□□□□ -1.36
MDH1-201ENST00000233114 COX7CP15954 63 aa6.55□□□□□ -1.36
MDH1-201ENST00000233114 C11orf45Q8TAV5 145 aa6.55□□□□□ -1.36
MDH1-201ENST00000233114 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
MDH1-201ENST00000233114 HIVEP1P15822 2718 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 KRTAP24-1Q3LI83 254 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 HIGD2BQ4VC39 106 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 Q6ZQY7 126 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 Q6ZRU5 148 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 C3orf56Q8N813 242 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
MDH1-201ENST00000233114 ATRQ13535 2644 aa6.53□□□□□ -1.36
MDH1-201ENST00000233114 TENM1Q9UKZ4 2725 aa6.53□□□□□ -1.36
MDH1-201ENST00000233114 IGKV3D-7A0A0C4DH55 119 aa6.53□□□□□ -1.36
MDH1-201ENST00000233114 DSCR8Q96T75 97 aa6.53□□□□□ -1.36
MDH1-201ENST00000233114 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
MDH1-201ENST00000233114 C9orf153Q5TBE3 101 aa6.52□□□□□ -1.37
MDH1-201ENST00000233114 CRYGAP11844 174 aa6.52□□□□□ -1.37
MDH1-201ENST00000233114 SYCNQ0VAF6 134 aa6.52□□□□□ -1.37
MDH1-201ENST00000233114 IGKV2D-24A0A075B6R9 120 aa6.51□□□□□ -1.37
MDH1-201ENST00000233114 TRAV10A0A0B4J240 114 aa6.51□□□□□ -1.37
MDH1-201ENST00000233114 BCE1O60756 84 aa6.51□□□□□ -1.37
MDH1-201ENST00000233114 TLX1NBP0CAT3 122 aa6.51□□□□□ -1.37
MDH1-201ENST00000233114 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
MDH1-201ENST00000233114 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
MDH1-201ENST00000233114 TRBV7-4A0A0J9YYF1 115 aa6.5□□□□□ -1.37
MDH1-201ENST00000233114 C1orf195Q5TG92 126 aa6.5□□□□□ -1.37
MDH1-201ENST00000233114 PRR26Q8N8Z3 221 aa6.5□□□□□ -1.37
MDH1-201ENST00000233114 RMI2Q96E14 147 aa6.49□□□□□ -1.37
MDH1-201ENST00000233114 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
MDH1-201ENST00000233114 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
MDH1-201ENST00000233114 CXCL6P80162 114 aa6.48□□□□□ -1.37
MDH1-201ENST00000233114 Q6ZRP5 223 aa6.48□□□□□ -1.37
MDH1-201ENST00000233114 KCNQ1DNQ9H478 68 aa6.48□□□□□ -1.37
MDH1-201ENST00000233114 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
MDH1-201ENST00000233114 NKAPP1Q8N9T2 125 aa6.47□□□□□ -1.37
MDH1-201ENST00000233114 A0A087WVE0 104 aa6.46□□□□□ -1.37
MDH1-201ENST00000233114 Q6ZVQ6 151 aa6.46□□□□□ -1.37
MDH1-201ENST00000233114 TM2D3Q9BRN9 247 aa6.46□□□□□ -1.37
MDH1-201ENST00000233114 J3KT08 172 aa6.45□□□□□ -1.38
MDH1-201ENST00000233114 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
MDH1-201ENST00000233114 LINC01547P58512 204 aaPredicted RBP6.45□□□□□ -1.38
MDH1-201ENST00000233114 PRYO14603 147 aa6.44□□□□□ -1.38
MDH1-201ENST00000233114 DHRS4-AS1Q9P1J3 65 aa6.44□□□□□ -1.38
MDH1-201ENST00000233114 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
MDH1-201ENST00000233114 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
MDH1-201ENST00000233114 F8P00451 2351 aa6.43□□□□□ -1.38
MDH1-201ENST00000233114 A0A1B0GW54 56 aa6.42□□□□□ -1.38
MDH1-201ENST00000233114 TMEM258P61165 79 aa6.42□□□□□ -1.38
MDH1-201ENST00000233114 M0R2N4 97 aa6.41□□□□□ -1.38
MDH1-201ENST00000233114 SPRR1AP35321 89 aa6.41□□□□□ -1.38
MDH1-201ENST00000233114 HAMPP81172 84 aa6.4□□□□□ -1.38
MDH1-201ENST00000233114 Q6ZRX8 168 aa6.4□□□□□ -1.38
MDH1-201ENST00000233114 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
MDH1-201ENST00000233114 TRAV7A0A075B6U4 112 aa6.39□□□□□ -1.39
MDH1-201ENST00000233114 LOC107984640A0A0U1RRK4 108 aa6.39□□□□□ -1.39
MDH1-201ENST00000233114 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
MDH1-201ENST00000233114 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
MDH1-201ENST00000233114 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
MDH1-201ENST00000233114 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
MDH1-201ENST00000233114 K7EIL1 84 aa6.38□□□□□ -1.39
MDH1-201ENST00000233114 ETDCA0A1B0GVM5 59 aa6.37□□□□□ -1.39
MDH1-201ENST00000233114 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
MDH1-201ENST00000233114 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
MDH1-201ENST00000233114 Q8N377 158 aa6.36□□□□□ -1.39
MDH1-201ENST00000233114 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
MDH1-201ENST00000233114 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
MDH1-201ENST00000233114 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
MDH1-201ENST00000233114 CASC10Q5T4H9 136 aa6.35□□□□□ -1.39
MDH1-201ENST00000233114 TENM3Q9P273 2699 aa6.35□□□□□ -1.39
MDH1-201ENST00000233114 FUSP35637 526 aaKnown RBP eCLIP6.34□□□□□ -1.39
MDH1-201ENST00000233114 NREPQ16612 68 aa6.34□□□□□ -1.39
MDH1-201ENST00000233114 CNBPP62633 177 aaKnown RBP6.33□□□□□ -1.4
MDH1-201ENST00000233114 Q9BRP9 147 aa6.33□□□□□ -1.4
MDH1-201ENST00000233114 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
MDH1-201ENST00000233114 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
MDH1-201ENST00000233114 CYSTM1Q9H1C7 97 aa6.33□□□□□ -1.4
MDH1-201ENST00000233114 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
MDH1-201ENST00000233114 RPL37AP8A6NKH3 93 aa6.32□□□□□ -1.4
MDH1-201ENST00000233114 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
MDH1-201ENST00000233114 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
MDH1-201ENST00000233114 MAST4O15021 2626 aa6.31□□□□□ -1.4
MDH1-201ENST00000233114 C16orf90A8MZG2 172 aa6.31□□□□□ -1.4
MDH1-201ENST00000233114 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
MDH1-201ENST00000233114 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
MDH1-201ENST00000233114 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
MDH1-201ENST00000233114 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 BPY2O14599 106 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 PRB2P02812 416 aaPredicted RBP6.3□□□□□ -1.4
MDH1-201ENST00000233114 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 Q8NBF4 154 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 STAB1Q9NY15 2570 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 DPH3Q96FX2 82 aa6.3□□□□□ -1.4
MDH1-201ENST00000233114 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms