RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 S100A7L2Q5SY68 101 aa8.21□□□□□ -1.09
GPN3-201ENST00000228827 SOSTDC1Q6X4U4 206 aa8.21□□□□□ -1.09
GPN3-201ENST00000228827 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
GPN3-201ENST00000228827 NDUFC2O95298 119 aa8.19□□□□□ -1.1
GPN3-201ENST00000228827 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
GPN3-201ENST00000228827 GAGE2AQ6NT46 116 aa8.19□□□□□ -1.1
GPN3-201ENST00000228827 PET117Q6UWS5 81 aa8.19□□□□□ -1.1
GPN3-201ENST00000228827 IGLV6-57P01721 117 aa8.18□□□□□ -1.1
GPN3-201ENST00000228827 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
GPN3-201ENST00000228827 Q8NBF4 154 aa8.18□□□□□ -1.1
GPN3-201ENST00000228827 Q9BRP9 147 aa8.18□□□□□ -1.1
GPN3-201ENST00000228827 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
GPN3-201ENST00000228827 Q6ZRX8 168 aa8.17□□□□□ -1.1
GPN3-201ENST00000228827 TTTY13Q9BZ97 58 aa8.17□□□□□ -1.1
GPN3-201ENST00000228827 MUC2Q02817 5179 aa8.16□□□□□ -1.1
GPN3-201ENST00000228827 KRTDAPP60985 99 aa8.16□□□□□ -1.1
GPN3-201ENST00000228827 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
GPN3-201ENST00000228827 COA6Q5JTJ3 125 aaKnown RBP8.16□□□□□ -1.1
GPN3-201ENST00000228827 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
GPN3-201ENST00000228827 LITAFQ99732 161 aa8.16□□□□□ -1.1
GPN3-201ENST00000228827 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
GPN3-201ENST00000228827 IGLV9-49A0A0B4J1Y8 123 aa8.15□□□□□ -1.1
GPN3-201ENST00000228827 ZNF815PA8K554 130 aa8.15□□□□□ -1.1
GPN3-201ENST00000228827 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
GPN3-201ENST00000228827 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
GPN3-201ENST00000228827 ZNF73O43830 326 aaPredicted RBP8.14□□□□□ -1.11
GPN3-201ENST00000228827 CTAG1AP78358 180 aa8.14□□□□□ -1.11
GPN3-201ENST00000228827 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
GPN3-201ENST00000228827 S100A2P29034 98 aa8.13□□□□□ -1.11
GPN3-201ENST00000228827 OR13C6PQ8NH95 151 aa8.13□□□□□ -1.11
GPN3-201ENST00000228827 TIMM17BO60830 172 aa8.13□□□□□ -1.11
GPN3-201ENST00000228827 MOBPQ13875 183 aa8.13□□□□□ -1.11
GPN3-201ENST00000228827 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
GPN3-201ENST00000228827 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
GPN3-201ENST00000228827 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
GPN3-201ENST00000228827 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
GPN3-201ENST00000228827 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
GPN3-201ENST00000228827 HIST3H2BBQ8N257 126 aa8.1□□□□□ -1.11
GPN3-201ENST00000228827 ST20-AS1Q8NBB2 130 aa8.1□□□□□ -1.11
GPN3-201ENST00000228827 C20orf202A1L168 122 aa8.09□□□□□ -1.11
GPN3-201ENST00000228827 HINT1P49773 126 aaPredicted RBP8.09□□□□□ -1.11
GPN3-201ENST00000228827 ANKRD39Q53RE8 183 aa8.08□□□□□ -1.12
GPN3-201ENST00000228827 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
GPN3-201ENST00000228827 CBY1Q9Y3M2 126 aa8.08□□□□□ -1.12
GPN3-201ENST00000228827 SPINK1P00995 79 aa8.07□□□□□ -1.12
GPN3-201ENST00000228827 C9orf153Q5TBE3 101 aa8.07□□□□□ -1.12
GPN3-201ENST00000228827 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
GPN3-201ENST00000228827 HIST1H2BLQ99880 126 aa8.06□□□□□ -1.12
GPN3-201ENST00000228827 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
GPN3-201ENST00000228827 MUC17Q685J3 4493 aa8.06□□□□□ -1.12
GPN3-201ENST00000228827 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
GPN3-201ENST00000228827 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
GPN3-201ENST00000228827 LOC105371267A0A1B0GV96 52 aa8.04□□□□□ -1.12
GPN3-201ENST00000228827 AKR1D1P51857 326 aa8.04□□□□□ -1.12
GPN3-201ENST00000228827 LINC00518Q8N0U6 118 aa8.04□□□□□ -1.12
GPN3-201ENST00000228827 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
GPN3-201ENST00000228827 PCP2Q8IVA1 136 aa8.03□□□□□ -1.12
GPN3-201ENST00000228827 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
GPN3-201ENST00000228827 COX7BP24311 80 aa8.02□□□□□ -1.13
GPN3-201ENST00000228827 Q8N377 158 aa8.02□□□□□ -1.13
GPN3-201ENST00000228827 A0A0U1RQV1 116 aa8.01□□□□□ -1.13
GPN3-201ENST00000228827 ELOF1P60002 83 aaKnown RBP8□□□□□ -1.13
GPN3-201ENST00000228827 MUSTN1Q8IVN3 82 aa8□□□□□ -1.13
GPN3-201ENST00000228827 A6NDN8 102 aa8□□□□□ -1.13
GPN3-201ENST00000228827 IFITM1P13164 125 aa8□□□□□ -1.13
GPN3-201ENST00000228827 RPS29P62273 56 aaKnown RBP8□□□□□ -1.13
GPN3-201ENST00000228827 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
GPN3-201ENST00000228827 COPS9Q8WXC6 57 aa8□□□□□ -1.13
GPN3-201ENST00000228827 SLC25A20O43772 301 aa7.98□□□□□ -1.13
GPN3-201ENST00000228827 SPRR1BP22528 89 aa7.98□□□□□ -1.13
GPN3-201ENST00000228827 DEFB105AQ8NG35 78 aa7.98□□□□□ -1.13
GPN3-201ENST00000228827 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
GPN3-201ENST00000228827 TAL2Q16559 108 aa7.97□□□□□ -1.13
GPN3-201ENST00000228827 SLC25A34Q6PIV7 304 aa7.97□□□□□ -1.13
GPN3-201ENST00000228827 HRCT1Q6UXD1 115 aa7.97□□□□□ -1.13
GPN3-201ENST00000228827 LAMTOR3Q9UHA4 124 aa7.97□□□□□ -1.13
GPN3-201ENST00000228827 Q6ZVH6 145 aa7.96□□□□□ -1.13
GPN3-201ENST00000228827 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
GPN3-201ENST00000228827 Q1RN00 199 aa7.95□□□□□ -1.14
GPN3-201ENST00000228827 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
GPN3-201ENST00000228827 XP32Q5T750 250 aa7.94□□□□□ -1.14
GPN3-201ENST00000228827 A0A1B0GWB2 263 aa7.94□□□□□ -1.14
GPN3-201ENST00000228827 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
GPN3-201ENST00000228827 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
GPN3-201ENST00000228827 TRAV13-2A0A0B4J235 113 aa7.92□□□□□ -1.14
GPN3-201ENST00000228827 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
GPN3-201ENST00000228827 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
GPN3-201ENST00000228827 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
GPN3-201ENST00000228827 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
GPN3-201ENST00000228827 SMIM11BQ8TCY0 68 aa7.91□□□□□ -1.14
GPN3-201ENST00000228827 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
GPN3-201ENST00000228827 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
GPN3-201ENST00000228827 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.14
GPN3-201ENST00000228827 LINC01547P58512 204 aaPredicted RBP7.89□□□□□ -1.15
GPN3-201ENST00000228827 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
GPN3-201ENST00000228827 SMIM29Q86T20 159 aa7.88□□□□□ -1.15
GPN3-201ENST00000228827 PRO1933Q9H354 126 aa7.88□□□□□ -1.15
GPN3-201ENST00000228827 A4D1N5 150 aa7.87□□□□□ -1.15
GPN3-201ENST00000228827 H7C2G1 150 aa7.87□□□□□ -1.15
GPN3-201ENST00000228827 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms