RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SMIM20Q8N5G0 67 aa16.42■□□□□ 0.22
RUNDC3A-201ENST00000225441 TRBV7-4A0A0J9YYF1 115 aa16.41■□□□□ 0.22
RUNDC3A-201ENST00000225441 SVIPQ8NHG7 77 aa16.41■□□□□ 0.22
RUNDC3A-201ENST00000225441 UPK3BQ9BT76 320 aa16.4■□□□□ 0.22
RUNDC3A-201ENST00000225441 CXCL6P80162 114 aa16.39■□□□□ 0.21
RUNDC3A-201ENST00000225441 LINC00528Q8N1L1 170 aa16.38■□□□□ 0.21
RUNDC3A-201ENST00000225441 SYCNQ0VAF6 134 aa16.35■□□□□ 0.21
RUNDC3A-201ENST00000225441 Q6ZVQ6 151 aa16.35■□□□□ 0.21
RUNDC3A-201ENST00000225441 DNAH10OSP0CZ25 163 aa16.35■□□□□ 0.21
RUNDC3A-201ENST00000225441 TMEM258P61165 79 aa16.35■□□□□ 0.21
RUNDC3A-201ENST00000225441 FAM19A1Q7Z5A9 133 aa16.35■□□□□ 0.21
RUNDC3A-201ENST00000225441 LINC01547P58512 204 aaPredicted RBP16.34■□□□□ 0.21
RUNDC3A-201ENST00000225441 RPS28P62857 69 aaKnown RBP16.33■□□□□ 0.2
RUNDC3A-201ENST00000225441 TLX1NBP0CAT3 122 aa16.32■□□□□ 0.2
RUNDC3A-201ENST00000225441 PLA2G2DQ9UNK4 145 aa16.32■□□□□ 0.2
RUNDC3A-201ENST00000225441 IGKV2D-24A0A075B6R9 120 aa16.31■□□□□ 0.2
RUNDC3A-201ENST00000225441 Q6ZRP5 223 aa16.3■□□□□ 0.2
RUNDC3A-201ENST00000225441 KCNQ1DNQ9H478 68 aa16.3■□□□□ 0.2
RUNDC3A-201ENST00000225441 NUPR2A6NF83 97 aa16.28■□□□□ 0.2
RUNDC3A-201ENST00000225441 J3KT08 172 aa16.26■□□□□ 0.19
RUNDC3A-201ENST00000225441 M0R2N4 97 aa16.26■□□□□ 0.19
RUNDC3A-201ENST00000225441 HAMPP81172 84 aa16.26■□□□□ 0.19
RUNDC3A-201ENST00000225441 NKAPP1Q8N9T2 125 aa16.26■□□□□ 0.19
RUNDC3A-201ENST00000225441 LINC00588Q9Y4M8 146 aa16.26■□□□□ 0.19
RUNDC3A-201ENST00000225441 APLNQ9ULZ1 77 aa16.25■□□□□ 0.19
RUNDC3A-201ENST00000225441 TRAV7A0A075B6U4 112 aa16.24■□□□□ 0.19
RUNDC3A-201ENST00000225441 IGLV5-37A0A075B6J1 123 aa16.22■□□□□ 0.19
RUNDC3A-201ENST00000225441 LOC107984640A0A0U1RRK4 108 aa16.22■□□□□ 0.19
RUNDC3A-201ENST00000225441 RMI2Q96E14 147 aa16.2■□□□□ 0.18
RUNDC3A-201ENST00000225441 A0A1B0GW54 56 aa16.19■□□□□ 0.18
RUNDC3A-201ENST00000225441 DHRS4-AS1Q9P1J3 65 aa16.19■□□□□ 0.18
RUNDC3A-201ENST00000225441 C7orf33Q8WU49 177 aa16.17■□□□□ 0.18
RUNDC3A-201ENST00000225441 CYSTM1Q9H1C7 97 aa16.17■□□□□ 0.18
RUNDC3A-201ENST00000225441 PRYO14603 147 aa16.17■□□□□ 0.18
RUNDC3A-201ENST00000225441 DYNC2H1Q8NCM8 4307 aaKnown RBP16.16■□□□□ 0.18
RUNDC3A-201ENST00000225441 SERTAD4-AS1Q5TG53 156 aa16.12■□□□□ 0.17
RUNDC3A-201ENST00000225441 DNAH7Q8WXX0 4024 aa16.12■□□□□ 0.17
RUNDC3A-201ENST00000225441 IGLV5-48A0A075B6I7 105 aa16.11■□□□□ 0.17
RUNDC3A-201ENST00000225441 CSMD3Q7Z407 3707 aa16.11■□□□□ 0.17
RUNDC3A-201ENST00000225441 SPRR1AP35321 89 aa16.1■□□□□ 0.17
RUNDC3A-201ENST00000225441 UBE2DNLQ8IWF7 75 aa16.1■□□□□ 0.17
RUNDC3A-201ENST00000225441 DPH3Q96FX2 82 aa16.1■□□□□ 0.17
RUNDC3A-201ENST00000225441 Q6ZRX8 168 aa16.09■□□□□ 0.17
RUNDC3A-201ENST00000225441 WWC2-AS2Q96NR7 200 aa16.09■□□□□ 0.17
RUNDC3A-201ENST00000225441 IGLV1-50A0A075B6I6 118 aa16.08■□□□□ 0.16
RUNDC3A-201ENST00000225441 KRTAP4-16G5E9R7 235 aaPredicted RBP16.08■□□□□ 0.16
RUNDC3A-201ENST00000225441 Q8N377 158 aa16.07■□□□□ 0.16
RUNDC3A-201ENST00000225441 C20orf197Q8N268 126 aa16.06■□□□□ 0.16
RUNDC3A-201ENST00000225441 KLKP1Q107X0 134 aa16.05■□□□□ 0.16
RUNDC3A-201ENST00000225441 NREPQ16612 68 aa16.05■□□□□ 0.16
RUNDC3A-201ENST00000225441 TGP01266 2768 aa16.04■□□□□ 0.16
RUNDC3A-201ENST00000225441 STARD9Q9P2P6 4700 aa16.04■□□□□ 0.16
RUNDC3A-201ENST00000225441 ETDCA0A1B0GVM5 59 aa16.03■□□□□ 0.16
RUNDC3A-201ENST00000225441 PLECQ15149 4684 aaKnown RBP16.02■□□□□ 0.15
RUNDC3A-201ENST00000225441 ERC2-IT1O76042 136 aa16■□□□□ 0.15
RUNDC3A-201ENST00000225441 FUSP35637 526 aaKnown RBP eCLIP15.98■□□□□ 0.15
RUNDC3A-201ENST00000225441 NDUFC1O43677 76 aa15.98■□□□□ 0.15
RUNDC3A-201ENST00000225441 TNP2Q05952 138 aa15.96■□□□□ 0.15
RUNDC3A-201ENST00000225441 MRPL55Q7Z7F7 128 aaKnown RBP15.96■□□□□ 0.15
RUNDC3A-201ENST00000225441 Q9BRP9 147 aa15.96■□□□□ 0.15
RUNDC3A-201ENST00000225441 DEFB105AQ8NG35 78 aa15.96■□□□□ 0.14
RUNDC3A-201ENST00000225441 TENM2Q9NT68 2774 aa15.95■□□□□ 0.14
RUNDC3A-201ENST00000225441 BPY2O14599 106 aa15.95■□□□□ 0.14
RUNDC3A-201ENST00000225441 SCXQ7RTU7 201 aa15.95■□□□□ 0.14
RUNDC3A-201ENST00000225441 FAM19A5Q7Z5A7 132 aaPredicted RBP15.95■□□□□ 0.14
RUNDC3A-201ENST00000225441 IGKV4-1P06312 121 aa15.94■□□□□ 0.14
RUNDC3A-201ENST00000225441 FAM236DA0A1B0GTK5 79 aa15.94■□□□□ 0.14
RUNDC3A-201ENST00000225441 H7BZZ5 65 aa15.94■□□□□ 0.14
RUNDC3A-201ENST00000225441 FAM236CP0DP71 79 aa15.94■□□□□ 0.14
RUNDC3A-201ENST00000225441 KRTAP1-5Q9BYS1 174 aa15.94■□□□□ 0.14
RUNDC3A-201ENST00000225441 RPL37AP8A6NKH3 93 aa15.93■□□□□ 0.14
RUNDC3A-201ENST00000225441 CASC10Q5T4H9 136 aa15.92■□□□□ 0.14
RUNDC3A-201ENST00000225441 KRTAP7-1Q8IUC3 87 aa15.91■□□□□ 0.14
RUNDC3A-201ENST00000225441 FAM168BA1KXE4 195 aa15.91■□□□□ 0.14
RUNDC3A-201ENST00000225441 C3orf84H3BNL1 204 aa15.89■□□□□ 0.13
RUNDC3A-201ENST00000225441 LYSTQ99698 3801 aa15.89■□□□□ 0.13
RUNDC3A-201ENST00000225441 C1orf137Q5JT78 98 aa15.89■□□□□ 0.13
RUNDC3A-201ENST00000225441 Q8NBF4 154 aa15.89■□□□□ 0.13
RUNDC3A-201ENST00000225441 SPRR4Q96PI1 79 aa15.88■□□□□ 0.13
RUNDC3A-201ENST00000225441 NBDYA0A0U1RRE5 68 aa15.87■□□□□ 0.13
RUNDC3A-201ENST00000225441 REG3GQ6UW15 175 aa15.87■□□□□ 0.13
RUNDC3A-201ENST00000225441 A0A1W2PNM2 257 aa15.86■□□□□ 0.13
RUNDC3A-201ENST00000225441 ATP5EP56381 51 aaPredicted RBP15.85■□□□□ 0.13
RUNDC3A-201ENST00000225441 SERP1Q9Y6X1 66 aa15.84■□□□□ 0.13
RUNDC3A-201ENST00000225441 DNAH1Q9P2D7 4330 aa15.84■□□□□ 0.13
RUNDC3A-201ENST00000225441 EPM2AB3EWF7 344 aa15.83■□□□□ 0.12
RUNDC3A-201ENST00000225441 CNBPP62633 177 aaKnown RBP15.83■□□□□ 0.12
RUNDC3A-201ENST00000225441 UBE2BP63146 152 aa15.82■□□□□ 0.12
RUNDC3A-201ENST00000225441 OCR1Q9BZK8 76 aa15.81■□□□□ 0.12
RUNDC3A-201ENST00000225441 VPS13DQ5THJ4 4388 aa15.81■□□□□ 0.12
RUNDC3A-201ENST00000225441 ST20-AS1Q8NBB2 130 aa15.8■□□□□ 0.12
RUNDC3A-201ENST00000225441 C16orf90A8MZG2 172 aa15.8■□□□□ 0.12
RUNDC3A-201ENST00000225441 OXTP01178 125 aa15.78■□□□□ 0.12
RUNDC3A-201ENST00000225441 TMEM254Q8TBM7 123 aa15.78■□□□□ 0.12
RUNDC3A-201ENST00000225441 SNURFQ9Y675 71 aa15.78■□□□□ 0.12
RUNDC3A-201ENST00000225441 LINC00476Q8WZB0 136 aa15.78■□□□□ 0.12
RUNDC3A-201ENST00000225441 LY6G6CO95867 125 aa15.77■□□□□ 0.11
RUNDC3A-201ENST00000225441 C14orf177Q52M58 125 aa15.77■□□□□ 0.11
RUNDC3A-201ENST00000225441 Q8N9L7 120 aa15.76■□□□□ 0.11
RUNDC3A-201ENST00000225441 F8WEM9 126 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms