RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
CCDC113-201ENST00000219299 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
CCDC113-201ENST00000219299 BCE1O60756 84 aa6.52□□□□□ -1.37
CCDC113-201ENST00000219299 Q6ZVQ6 151 aa6.52□□□□□ -1.37
CCDC113-201ENST00000219299 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
CCDC113-201ENST00000219299 A0A1B0GUV1 79 aa6.51□□□□□ -1.37
CCDC113-201ENST00000219299 PSPHP1O15172 72 aa6.5□□□□□ -1.37
CCDC113-201ENST00000219299 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
CCDC113-201ENST00000219299 CXCL6P80162 114 aa6.5□□□□□ -1.37
CCDC113-201ENST00000219299 UNQ6190/PRO20217Q6UXQ8 127 aa6.5□□□□□ -1.37
CCDC113-201ENST00000219299 C1orf137Q5JT78 98 aa6.5□□□□□ -1.37
CCDC113-201ENST00000219299 PLAC8L1A1L4L8 177 aa6.49□□□□□ -1.37
CCDC113-201ENST00000219299 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
CCDC113-201ENST00000219299 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
CCDC113-201ENST00000219299 ZFHX4Q86UP3 3567 aa6.48□□□□□ -1.37
CCDC113-201ENST00000219299 PRR3P79522 188 aaKnown RBP6.48□□□□□ -1.37
CCDC113-201ENST00000219299 LINC00575Q6W349 94 aa6.48□□□□□ -1.37
CCDC113-201ENST00000219299 LINC00337Q8N6G1 96 aa6.48□□□□□ -1.37
CCDC113-201ENST00000219299 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
CCDC113-201ENST00000219299 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
CCDC113-201ENST00000219299 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
CCDC113-201ENST00000219299 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
CCDC113-201ENST00000219299 C4orf26Q17RF5 130 aa6.47□□□□□ -1.37
CCDC113-201ENST00000219299 H3BNG1 76 aa6.47□□□□□ -1.37
CCDC113-201ENST00000219299 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
CCDC113-201ENST00000219299 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.38
CCDC113-201ENST00000219299 LINC01556Q5JQF7 62 aa6.46□□□□□ -1.38
CCDC113-201ENST00000219299 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
CCDC113-201ENST00000219299 TM2D3Q9BRN9 247 aa6.45□□□□□ -1.38
CCDC113-201ENST00000219299 LINC00588Q9Y4M8 146 aa6.45□□□□□ -1.38
CCDC113-201ENST00000219299 C6orf223Q8N319 242 aa6.45□□□□□ -1.38
CCDC113-201ENST00000219299 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
CCDC113-201ENST00000219299 REG3GQ6UW15 175 aa6.43□□□□□ -1.38
CCDC113-201ENST00000219299 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
CCDC113-201ENST00000219299 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
CCDC113-201ENST00000219299 H0Y9P7 68 aa6.43□□□□□ -1.38
CCDC113-201ENST00000219299 IGHV3OR16-9A0A0B4J2B5 98 aa6.42□□□□□ -1.38
CCDC113-201ENST00000219299 WIPF1O43516 503 aa6.42□□□□□ -1.38
CCDC113-201ENST00000219299 HCG22E2RYF7 251 aa6.42□□□□□ -1.38
CCDC113-201ENST00000219299 VPREB1P12018 145 aa6.41□□□□□ -1.38
CCDC113-201ENST00000219299 STAB2Q8WWQ8 2551 aa6.4□□□□□ -1.38
CCDC113-201ENST00000219299 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
CCDC113-201ENST00000219299 Q6ZRU5 148 aa6.39□□□□□ -1.39
CCDC113-201ENST00000219299 NBDYA0A0U1RRE5 68 aa6.39□□□□□ -1.39
CCDC113-201ENST00000219299 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
CCDC113-201ENST00000219299 LINC00612Q8N6U2 182 aa6.39□□□□□ -1.39
CCDC113-201ENST00000219299 FAM218AQ96MZ4 157 aa6.39□□□□□ -1.39
CCDC113-201ENST00000219299 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
CCDC113-201ENST00000219299 A0A087WSZ3 146 aa6.37□□□□□ -1.39
CCDC113-201ENST00000219299 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
CCDC113-201ENST00000219299 OTOGQ6ZRI0 2925 aa6.36□□□□□ -1.39
CCDC113-201ENST00000219299 A0A1B0GW54 56 aa6.36□□□□□ -1.39
CCDC113-201ENST00000219299 C1orf64Q8NEQ6 169 aa6.35□□□□□ -1.39
CCDC113-201ENST00000219299 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
CCDC113-201ENST00000219299 DNAH10OSP0CZ25 163 aa6.35□□□□□ -1.39
CCDC113-201ENST00000219299 Q9BRP9 147 aa6.35□□□□□ -1.39
CCDC113-201ENST00000219299 Q6ZQT0 140 aa6.34□□□□□ -1.39
CCDC113-201ENST00000219299 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
CCDC113-201ENST00000219299 ZNF575Q86XF7 245 aa6.34□□□□□ -1.39
CCDC113-201ENST00000219299 PDZD2O15018 2839 aa6.33□□□□□ -1.4
CCDC113-201ENST00000219299 SMCR5Q8TEV8 140 aa6.32□□□□□ -1.4
CCDC113-201ENST00000219299 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
CCDC113-201ENST00000219299 H3BPC8 53 aa6.32□□□□□ -1.4
CCDC113-201ENST00000219299 LITAFQ99732 161 aa6.31□□□□□ -1.4
CCDC113-201ENST00000219299 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
CCDC113-201ENST00000219299 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
CCDC113-201ENST00000219299 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
CCDC113-201ENST00000219299 CELSR1Q9NYQ6 3014 aa6.3□□□□□ -1.4
CCDC113-201ENST00000219299 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
CCDC113-201ENST00000219299 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
CCDC113-201ENST00000219299 APLNQ9ULZ1 77 aa6.28□□□□□ -1.4
CCDC113-201ENST00000219299 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
CCDC113-201ENST00000219299 C22orf24Q9Y442 160 aa6.28□□□□□ -1.4
CCDC113-201ENST00000219299 ELOF1P60002 83 aaKnown RBP6.28□□□□□ -1.4
CCDC113-201ENST00000219299 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
CCDC113-201ENST00000219299 PRR34Q9NV39 138 aa6.27□□□□□ -1.41
CCDC113-201ENST00000219299 TENM1Q9UKZ4 2725 aa6.27□□□□□ -1.41
CCDC113-201ENST00000219299 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
CCDC113-201ENST00000219299 A0A1B0GU69 56 aa6.26□□□□□ -1.41
CCDC113-201ENST00000219299 NBPF19A0A087WUL8 3843 aa6.26□□□□□ -1.41
CCDC113-201ENST00000219299 Q8NBF4 154 aa6.25□□□□□ -1.41
CCDC113-201ENST00000219299 RTL8CO15255 209 aa6.25□□□□□ -1.41
CCDC113-201ENST00000219299 KLKP1Q107X0 134 aa6.25□□□□□ -1.41
CCDC113-201ENST00000219299 CHTF8P0CG12 524 aa6.24□□□□□ -1.41
CCDC113-201ENST00000219299 C16orf90A8MZG2 172 aa6.24□□□□□ -1.41
CCDC113-201ENST00000219299 ACYP2P14621 99 aa6.24□□□□□ -1.41
CCDC113-201ENST00000219299 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
CCDC113-201ENST00000219299 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
CCDC113-201ENST00000219299 SPINK1P00995 79 aa6.23□□□□□ -1.41
CCDC113-201ENST00000219299 PRLHP81277 87 aa6.23□□□□□ -1.41
CCDC113-201ENST00000219299 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
CCDC113-201ENST00000219299 LINC00336Q6ZUF6 198 aa6.22□□□□□ -1.41
CCDC113-201ENST00000219299 FBN1P35555 2871 aaKnown RBP6.22□□□□□ -1.41
CCDC113-201ENST00000219299 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
CCDC113-201ENST00000219299 LINC00167Q96N53 147 aa6.21□□□□□ -1.41
CCDC113-201ENST00000219299 TRAV22A0A0B4J277 110 aa6.21□□□□□ -1.42
CCDC113-201ENST00000219299 CASC10Q5T4H9 136 aa6.21□□□□□ -1.42
CCDC113-201ENST00000219299 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
CCDC113-201ENST00000219299 CSMD1Q96PZ7 3565 aa6.2□□□□□ -1.42
CCDC113-201ENST00000219299 Q6ZRP5 223 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms