RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 BAALC-AS2P0C853 105 aa7.08□□□□□ -1.28
APOBEC3D-201ENST00000216099 ESRGQ1W209 222 aa7.08□□□□□ -1.28
APOBEC3D-201ENST00000216099 GVQW2A0A096LPI5 108 aaPredicted RBP7.07□□□□□ -1.28
APOBEC3D-201ENST00000216099 TRAV10A0A0B4J240 114 aa7.07□□□□□ -1.28
APOBEC3D-201ENST00000216099 K7EIL1 84 aa7.07□□□□□ -1.28
APOBEC3D-201ENST00000216099 LINC01556Q5JQF7 62 aa7.07□□□□□ -1.28
APOBEC3D-201ENST00000216099 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
APOBEC3D-201ENST00000216099 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
APOBEC3D-201ENST00000216099 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
APOBEC3D-201ENST00000216099 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
APOBEC3D-201ENST00000216099 SMIM11BQ8TCY0 68 aa7.05□□□□□ -1.28
APOBEC3D-201ENST00000216099 H0YGX0 51 aa7.05□□□□□ -1.28
APOBEC3D-201ENST00000216099 KTN1-AS1Q86SY8 53 aa7.05□□□□□ -1.28
APOBEC3D-201ENST00000216099 C22orf24Q9Y442 160 aa7.04□□□□□ -1.28
APOBEC3D-201ENST00000216099 DNAH10OSP0CZ25 163 aa7.04□□□□□ -1.28
APOBEC3D-201ENST00000216099 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
APOBEC3D-201ENST00000216099 COL6A5A8TX70 2615 aa7.03□□□□□ -1.28
APOBEC3D-201ENST00000216099 DNAL4O96015 105 aa7.02□□□□□ -1.29
APOBEC3D-201ENST00000216099 ANK2Q01484 3957 aa7.02□□□□□ -1.29
APOBEC3D-201ENST00000216099 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
APOBEC3D-201ENST00000216099 PRB2P02812 416 aaPredicted RBP7.02□□□□□ -1.29
APOBEC3D-201ENST00000216099 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
APOBEC3D-201ENST00000216099 Q6JHZ5 121 aa7.02□□□□□ -1.29
APOBEC3D-201ENST00000216099 IGHV6-1A0A0B4J1U7 121 aa7.01□□□□□ -1.29
APOBEC3D-201ENST00000216099 LINC00313P59037 77 aa7□□□□□ -1.29
APOBEC3D-201ENST00000216099 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
APOBEC3D-201ENST00000216099 A0A087WVE0 104 aa7□□□□□ -1.29
APOBEC3D-201ENST00000216099 C15orf56Q8N910 161 aa7□□□□□ -1.29
APOBEC3D-201ENST00000216099 M0R378 163 aa6.99□□□□□ -1.29
APOBEC3D-201ENST00000216099 MP68P56378 58 aa6.99□□□□□ -1.29
APOBEC3D-201ENST00000216099 RBM3P98179 157 aaKnown RBP6.99□□□□□ -1.29
APOBEC3D-201ENST00000216099 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
APOBEC3D-201ENST00000216099 CAMK2N2Q96S95 79 aa6.98□□□□□ -1.29
APOBEC3D-201ENST00000216099 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
APOBEC3D-201ENST00000216099 LINC00588Q9Y4M8 146 aa6.98□□□□□ -1.29
APOBEC3D-201ENST00000216099 CCKP06307 115 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 Q8NDZ9 215 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 C14orf132Q9NPU4 83 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 LINC00846Q9NV44 126 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 A0A087WYN8 130 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 NBEAL1Q6ZS30 2694 aa6.97□□□□□ -1.29
APOBEC3D-201ENST00000216099 HIGD2BQ4VC39 106 aa6.96□□□□□ -1.29
APOBEC3D-201ENST00000216099 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.3
APOBEC3D-201ENST00000216099 NCR3O14931 201 aa6.96□□□□□ -1.3
APOBEC3D-201ENST00000216099 A8MUN3 132 aa6.95□□□□□ -1.3
APOBEC3D-201ENST00000216099 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
APOBEC3D-201ENST00000216099 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
APOBEC3D-201ENST00000216099 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
APOBEC3D-201ENST00000216099 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
APOBEC3D-201ENST00000216099 LECT2O14960 151 aa6.94□□□□□ -1.3
APOBEC3D-201ENST00000216099 PSPHP1O15172 72 aa6.94□□□□□ -1.3
APOBEC3D-201ENST00000216099 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
APOBEC3D-201ENST00000216099 RMI2Q96E14 147 aa6.94□□□□□ -1.3
APOBEC3D-201ENST00000216099 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
APOBEC3D-201ENST00000216099 OBSCN-AS1Q96MR7 158 aa6.94□□□□□ -1.3
APOBEC3D-201ENST00000216099 B9D2Q9BPU9 175 aa6.93□□□□□ -1.3
APOBEC3D-201ENST00000216099 H7BZZ5 65 aa6.93□□□□□ -1.3
APOBEC3D-201ENST00000216099 TMEM256-PLSCR3K7ERE1 68 aa6.93□□□□□ -1.3
APOBEC3D-201ENST00000216099 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
APOBEC3D-201ENST00000216099 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
APOBEC3D-201ENST00000216099 SYCNQ0VAF6 134 aa6.92□□□□□ -1.3
APOBEC3D-201ENST00000216099 Q8N814 137 aa6.92□□□□□ -1.3
APOBEC3D-201ENST00000216099 ORMDL1Q9P0S3 153 aa6.92□□□□□ -1.3
APOBEC3D-201ENST00000216099 TLX1NBP0CAT3 122 aa6.91□□□□□ -1.3
APOBEC3D-201ENST00000216099 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
APOBEC3D-201ENST00000216099 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
APOBEC3D-201ENST00000216099 LINC00575Q6W349 94 aa6.9□□□□□ -1.31
APOBEC3D-201ENST00000216099 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
APOBEC3D-201ENST00000216099 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
APOBEC3D-201ENST00000216099 TRBV10-3A0A0K0K1G6 114 aa6.89□□□□□ -1.31
APOBEC3D-201ENST00000216099 ATP5EP2Q5VTU8 51 aa6.89□□□□□ -1.31
APOBEC3D-201ENST00000216099 H3BQ85 93 aa6.88□□□□□ -1.31
APOBEC3D-201ENST00000216099 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
APOBEC3D-201ENST00000216099 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
APOBEC3D-201ENST00000216099 SLPIP03973 132 aa6.87□□□□□ -1.31
APOBEC3D-201ENST00000216099 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
APOBEC3D-201ENST00000216099 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
APOBEC3D-201ENST00000216099 DNAH9Q9NYC9 4486 aa6.85□□□□□ -1.31
APOBEC3D-201ENST00000216099 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
APOBEC3D-201ENST00000216099 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
APOBEC3D-201ENST00000216099 CASC10Q5T4H9 136 aa6.85□□□□□ -1.31
APOBEC3D-201ENST00000216099 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
APOBEC3D-201ENST00000216099 COX7BP24311 80 aa6.84□□□□□ -1.31
APOBEC3D-201ENST00000216099 ELOF1P60002 83 aaKnown RBP6.84□□□□□ -1.31
APOBEC3D-201ENST00000216099 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
APOBEC3D-201ENST00000216099 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
APOBEC3D-201ENST00000216099 LCA10Q71F78 164 aa6.83□□□□□ -1.32
APOBEC3D-201ENST00000216099 PHF5AQ7RTV0 110 aaKnown RBP6.83□□□□□ -1.32
APOBEC3D-201ENST00000216099 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
APOBEC3D-201ENST00000216099 TRAV7A0A075B6U4 112 aa6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 BCE1O60756 84 aa6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 CXCL6P80162 114 aa6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
APOBEC3D-201ENST00000216099 KLKP1Q107X0 134 aa6.81□□□□□ -1.32
APOBEC3D-201ENST00000216099 UBL5Q9BZL1 73 aa6.81□□□□□ -1.32
APOBEC3D-201ENST00000216099 KRTAP1-5Q9BYS1 174 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms