RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 Q6ZVQ6 151 aa10.02□□□□□ -0.81
EFNB1-201ENST00000204961 Q5XG85 94 aa10.01□□□□□ -0.81
EFNB1-201ENST00000204961 Q6ZQT0 140 aa10□□□□□ -0.81
EFNB1-201ENST00000204961 LINC00336Q6ZUF6 198 aa10□□□□□ -0.81
EFNB1-201ENST00000204961 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
EFNB1-201ENST00000204961 NKAPP1Q8N9T2 125 aa10□□□□□ -0.81
EFNB1-201ENST00000204961 C11orf45Q8TAV5 145 aa9.99□□□□□ -0.81
EFNB1-201ENST00000204961 IGKV2-24A0A0C4DH68 120 aa9.98□□□□□ -0.81
EFNB1-201ENST00000204961 F8WEM9 126 aa9.98□□□□□ -0.81
EFNB1-201ENST00000204961 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
EFNB1-201ENST00000204961 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
EFNB1-201ENST00000204961 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
EFNB1-201ENST00000204961 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
EFNB1-201ENST00000204961 BPY2O14599 106 aa9.97□□□□□ -0.81
EFNB1-201ENST00000204961 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
EFNB1-201ENST00000204961 SYCNQ0VAF6 134 aa9.95□□□□□ -0.82
EFNB1-201ENST00000204961 VPREB1P12018 145 aa9.95□□□□□ -0.82
EFNB1-201ENST00000204961 DEFB116Q30KQ4 102 aa9.95□□□□□ -0.82
EFNB1-201ENST00000204961 BRK1Q8WUW1 75 aa9.95□□□□□ -0.82
EFNB1-201ENST00000204961 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
EFNB1-201ENST00000204961 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
EFNB1-201ENST00000204961 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
EFNB1-201ENST00000204961 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
EFNB1-201ENST00000204961 H7BZZ5 65 aa9.93□□□□□ -0.82
EFNB1-201ENST00000204961 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
EFNB1-201ENST00000204961 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
EFNB1-201ENST00000204961 A0A096LNI7 61 aa9.92□□□□□ -0.82
EFNB1-201ENST00000204961 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
EFNB1-201ENST00000204961 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
EFNB1-201ENST00000204961 LINC00167Q96N53 147 aa9.91□□□□□ -0.82
EFNB1-201ENST00000204961 TRAV7A0A075B6U4 112 aa9.9□□□□□ -0.82
EFNB1-201ENST00000204961 UBE2BP63146 152 aa9.9□□□□□ -0.82
EFNB1-201ENST00000204961 C7orf33Q8WU49 177 aa9.9□□□□□ -0.82
EFNB1-201ENST00000204961 M0R378 163 aa9.89□□□□□ -0.83
EFNB1-201ENST00000204961 NREPQ16612 68 aa9.89□□□□□ -0.83
EFNB1-201ENST00000204961 EGFEM1PQ0D2K5 195 aa9.87□□□□□ -0.83
EFNB1-201ENST00000204961 ELOF1P60002 83 aaKnown RBP9.87□□□□□ -0.83
EFNB1-201ENST00000204961 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
EFNB1-201ENST00000204961 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.83
EFNB1-201ENST00000204961 ETDCA0A1B0GVM5 59 aa9.85□□□□□ -0.83
EFNB1-201ENST00000204961 SERP1Q9Y6X1 66 aa9.85□□□□□ -0.83
EFNB1-201ENST00000204961 PRR4Q16378 134 aa9.84□□□□□ -0.83
EFNB1-201ENST00000204961 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
EFNB1-201ENST00000204961 LYSTQ99698 3801 aa9.83□□□□□ -0.84
EFNB1-201ENST00000204961 ERC2-IT1O76042 136 aa9.83□□□□□ -0.84
EFNB1-201ENST00000204961 HIGD2AQ9BW72 106 aa9.83□□□□□ -0.84
EFNB1-201ENST00000204961 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
EFNB1-201ENST00000204961 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
EFNB1-201ENST00000204961 FAM30AQ9NZY2 134 aa9.82□□□□□ -0.84
EFNB1-201ENST00000204961 WIPF1O43516 503 aa9.82□□□□□ -0.84
EFNB1-201ENST00000204961 PRLHP81277 87 aa9.82□□□□□ -0.84
EFNB1-201ENST00000204961 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
EFNB1-201ENST00000204961 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
EFNB1-201ENST00000204961 PSCAO43653 123 aa9.8□□□□□ -0.84
EFNB1-201ENST00000204961 Q8N377 158 aa9.8□□□□□ -0.84
EFNB1-201ENST00000204961 LOC110117498A0A087WWA1 95 aa9.79□□□□□ -0.84
EFNB1-201ENST00000204961 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
EFNB1-201ENST00000204961 TRBV7-4A0A0J9YYF1 115 aa9.78□□□□□ -0.84
EFNB1-201ENST00000204961 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
EFNB1-201ENST00000204961 KLKP1Q107X0 134 aa9.77□□□□□ -0.84
EFNB1-201ENST00000204961 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.84
EFNB1-201ENST00000204961 PRO0628Q9UI54 55 aa9.77□□□□□ -0.84
EFNB1-201ENST00000204961 FAM229BQ4G0N7 80 aa9.77□□□□□ -0.85
EFNB1-201ENST00000204961 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
EFNB1-201ENST00000204961 LINC01556Q5JQF7 62 aa9.76□□□□□ -0.85
EFNB1-201ENST00000204961 Q9BRP9 147 aa9.76□□□□□ -0.85
EFNB1-201ENST00000204961 TGP01266 2768 aa9.75□□□□□ -0.85
EFNB1-201ENST00000204961 DNAH10Q8IVF4 4471 aa9.75□□□□□ -0.85
EFNB1-201ENST00000204961 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
EFNB1-201ENST00000204961 CXCL6P80162 114 aa9.74□□□□□ -0.85
EFNB1-201ENST00000204961 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
EFNB1-201ENST00000204961 SMIM29Q86T20 159 aa9.72□□□□□ -0.85
EFNB1-201ENST00000204961 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
EFNB1-201ENST00000204961 PDE6GP18545 87 aa9.71□□□□□ -0.86
EFNB1-201ENST00000204961 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
EFNB1-201ENST00000204961 A0A1W2PNM2 257 aa9.7□□□□□ -0.86
EFNB1-201ENST00000204961 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
EFNB1-201ENST00000204961 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
EFNB1-201ENST00000204961 MRPL55Q7Z7F7 128 aaKnown RBP9.69□□□□□ -0.86
EFNB1-201ENST00000204961 IGKV4-1P06312 121 aa9.68□□□□□ -0.86
EFNB1-201ENST00000204961 SEC61GP60059 68 aa9.68□□□□□ -0.86
EFNB1-201ENST00000204961 Q6ZRX8 168 aa9.68□□□□□ -0.86
EFNB1-201ENST00000204961 KRTAP1-5Q9BYS1 174 aa9.67□□□□□ -0.86
EFNB1-201ENST00000204961 PRYO14603 147 aa9.67□□□□□ -0.86
EFNB1-201ENST00000204961 V9GYY9 64 aa9.67□□□□□ -0.86
EFNB1-201ENST00000204961 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
EFNB1-201ENST00000204961 K7EIL1 84 aa9.65□□□□□ -0.86
EFNB1-201ENST00000204961 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.86
EFNB1-201ENST00000204961 K7EQZ3 153 aa9.65□□□□□ -0.86
EFNB1-201ENST00000204961 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
EFNB1-201ENST00000204961 A0A087WSZ3 146 aa9.64□□□□□ -0.87
EFNB1-201ENST00000204961 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
EFNB1-201ENST00000204961 NDUFC1O43677 76 aa9.63□□□□□ -0.87
EFNB1-201ENST00000204961 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
EFNB1-201ENST00000204961 H3BNG1 76 aa9.61□□□□□ -0.87
EFNB1-201ENST00000204961 BCE1O60756 84 aa9.61□□□□□ -0.87
EFNB1-201ENST00000204961 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
EFNB1-201ENST00000204961 LINC00476Q8WZB0 136 aa9.61□□□□□ -0.87
EFNB1-201ENST00000204961 PSPHP1O15172 72 aa9.59□□□□□ -0.87
EFNB1-201ENST00000204961 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms