RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
CDC27-201ENST00000066544 LINC00528Q8N1L1 170 aa5.43□□□□□ -1.54
CDC27-201ENST00000066544 C7orf33Q8WU49 177 aa5.43□□□□□ -1.54
CDC27-201ENST00000066544 WIPF1O43516 503 aa5.42□□□□□ -1.54
CDC27-201ENST00000066544 J3KT08 172 aa5.42□□□□□ -1.54
CDC27-201ENST00000066544 LINC01556Q5JQF7 62 aa5.42□□□□□ -1.54
CDC27-201ENST00000066544 TRBV7-4A0A0J9YYF1 115 aa5.42□□□□□ -1.54
CDC27-201ENST00000066544 FAM19A5Q7Z5A7 132 aaPredicted RBP5.42□□□□□ -1.54
CDC27-201ENST00000066544 PDE6GP18545 87 aa5.41□□□□□ -1.54
CDC27-201ENST00000066544 H3BNG1 76 aa5.4□□□□□ -1.54
CDC27-201ENST00000066544 ST20-AS1Q8NBB2 130 aa5.4□□□□□ -1.55
CDC27-201ENST00000066544 LINC00588Q9Y4M8 146 aa5.4□□□□□ -1.55
CDC27-201ENST00000066544 RMI2Q96E14 147 aa5.4□□□□□ -1.55
CDC27-201ENST00000066544 DPH3Q96FX2 82 aa5.4□□□□□ -1.55
CDC27-201ENST00000066544 TMEM258P61165 79 aa5.4□□□□□ -1.55
CDC27-201ENST00000066544 TM2D3Q9BRN9 247 aa5.4□□□□□ -1.55
CDC27-201ENST00000066544 ANK2Q01484 3957 aa5.39□□□□□ -1.55
CDC27-201ENST00000066544 BPY2O14599 106 aa5.39□□□□□ -1.55
CDC27-201ENST00000066544 NREPQ16612 68 aa5.39□□□□□ -1.55
CDC27-201ENST00000066544 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
CDC27-201ENST00000066544 OXTP01178 125 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 A0A0G2JQZ4 141 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 A0A1W2PNN7 141 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 Q8N377 158 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 SRRM2Q9UQ35 2752 aaKnown RBP5.38□□□□□ -1.55
CDC27-201ENST00000066544 UBE2BP63146 152 aa5.38□□□□□ -1.55
CDC27-201ENST00000066544 TRAV7A0A075B6U4 112 aa5.37□□□□□ -1.55
CDC27-201ENST00000066544 TRBV7-6A0A0J9YX20 115 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 DNAH10OSP0CZ25 163 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 CXCL6P80162 114 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 H3BQ85 93 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 KCNQ1DNQ9H478 68 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 Q9BRP9 147 aa5.36□□□□□ -1.55
CDC27-201ENST00000066544 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
CDC27-201ENST00000066544 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
CDC27-201ENST00000066544 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
CDC27-201ENST00000066544 F8WEM9 126 aa5.35□□□□□ -1.55
CDC27-201ENST00000066544 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
CDC27-201ENST00000066544 Q6ZRX8 168 aa5.34□□□□□ -1.55
CDC27-201ENST00000066544 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
CDC27-201ENST00000066544 H7BZZ5 65 aa5.33□□□□□ -1.56
CDC27-201ENST00000066544 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
CDC27-201ENST00000066544 FUSP35637 526 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDC27-201ENST00000066544 A0A1W2PNM2 257 aa5.33□□□□□ -1.56
CDC27-201ENST00000066544 PRLHP81277 87 aa5.33□□□□□ -1.56
CDC27-201ENST00000066544 IGLV1-50A0A075B6I6 118 aa5.33□□□□□ -1.56
CDC27-201ENST00000066544 DEFB116Q30KQ4 102 aa5.32□□□□□ -1.56
CDC27-201ENST00000066544 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
CDC27-201ENST00000066544 HIGD2AQ9BW72 106 aa5.32□□□□□ -1.56
CDC27-201ENST00000066544 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
CDC27-201ENST00000066544 IGKV4-1P06312 121 aa5.32□□□□□ -1.56
CDC27-201ENST00000066544 K7EIL1 84 aa5.32□□□□□ -1.56
CDC27-201ENST00000066544 PSCAO43653 123 aa5.32□□□□□ -1.56
CDC27-201ENST00000066544 DHRS4-AS1Q9P1J3 65 aa5.31□□□□□ -1.56
CDC27-201ENST00000066544 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
CDC27-201ENST00000066544 HRCT1Q6UXD1 115 aa5.31□□□□□ -1.56
CDC27-201ENST00000066544 FAM30AQ9NZY2 134 aa5.3□□□□□ -1.56
CDC27-201ENST00000066544 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
CDC27-201ENST00000066544 CHTF8P0CG12 524 aa5.3□□□□□ -1.56
CDC27-201ENST00000066544 TMEM254Q8TBM7 123 aa5.3□□□□□ -1.56
CDC27-201ENST00000066544 A0A096LNI7 61 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 PRYO14603 147 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 UBE2DNLQ8IWF7 75 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
CDC27-201ENST00000066544 KLKP1Q107X0 134 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 COL7A1Q02388 2944 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 IGLV5-48A0A075B6I7 105 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 SMIM29Q86T20 159 aa5.29□□□□□ -1.56
CDC27-201ENST00000066544 TLX1NBP0CAT3 122 aa5.28□□□□□ -1.56
CDC27-201ENST00000066544 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
CDC27-201ENST00000066544 F8WDY8 70 aa5.28□□□□□ -1.56
CDC27-201ENST00000066544 Q8NBF4 154 aa5.28□□□□□ -1.56
CDC27-201ENST00000066544 SPRR1AP35321 89 aa5.27□□□□□ -1.57
CDC27-201ENST00000066544 LINC00476Q8WZB0 136 aa5.27□□□□□ -1.57
CDC27-201ENST00000066544 BCE1O60756 84 aa5.26□□□□□ -1.57
CDC27-201ENST00000066544 K7EQZ3 153 aa5.26□□□□□ -1.57
CDC27-201ENST00000066544 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
CDC27-201ENST00000066544 PHF5AQ7RTV0 110 aaKnown RBP5.25□□□□□ -1.57
CDC27-201ENST00000066544 OCR1Q9BZK8 76 aa5.25□□□□□ -1.57
CDC27-201ENST00000066544 Q5XG85 94 aa5.25□□□□□ -1.57
CDC27-201ENST00000066544 A0A087WSZ3 146 aa5.25□□□□□ -1.57
CDC27-201ENST00000066544 TNP2Q05952 138 aa5.25□□□□□ -1.57
CDC27-201ENST00000066544 WFDC13Q8IUB5 93 aa5.24□□□□□ -1.57
CDC27-201ENST00000066544 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
CDC27-201ENST00000066544 LINC00474Q9P2X8 69 aa5.24□□□□□ -1.57
CDC27-201ENST00000066544 IGLV5-37A0A075B6J1 123 aa5.24□□□□□ -1.57
CDC27-201ENST00000066544 PRR4Q16378 134 aa5.24□□□□□ -1.57
CDC27-201ENST00000066544 SERP1Q9Y6X1 66 aa5.24□□□□□ -1.57
CDC27-201ENST00000066544 DSCR10P59022 87 aa5.23□□□□□ -1.57
CDC27-201ENST00000066544 KRTAP11-1Q8IUC1 163 aa5.23□□□□□ -1.57
CDC27-201ENST00000066544 RPL37AP61513 92 aaKnown RBP5.23□□□□□ -1.57
CDC27-201ENST00000066544 IGFL1Q6UW32 110 aa5.23□□□□□ -1.57
CDC27-201ENST00000066544 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
CDC27-201ENST00000066544 LYSTQ99698 3801 aa5.22□□□□□ -1.57
CDC27-201ENST00000066544 LRCOL1A6NCL2 159 aa5.22□□□□□ -1.57
CDC27-201ENST00000066544 EPM2AB3EWF7 344 aa5.22□□□□□ -1.57
CDC27-201ENST00000066544 UBE2AP49459 152 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms