RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	IGLV1-50	A0A075B6I6	118 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939		A0A0U1RRA0	63 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BK	O60814	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	DPM2	O94777	84 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BJ	P06899	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	SMIM13	P0DJ93	91 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BO	P23527	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BB	P33778	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BD	P58876	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BC	P62807	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HERV-K104	P63124	156 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST2H2BE	Q16778	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BH	Q93079	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BN	Q99877	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	HIST1H2BM	Q99879	126 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	NDUFA12	Q9UI09	145 aa		9.03	□□□□□ -0.96
PHGDH-231	ENST00000641939	MYMX	A0A1B0GTQ4	84 aa		9.02	□□□□□ -0.97
PHGDH-231	ENST00000641939	ATP6V1G1	O75348	118 aa		9.02	□□□□□ -0.97
PHGDH-231	ENST00000641939	MEIG1	Q5JSS6	88 aa		9.02	□□□□□ -0.97
PHGDH-231	ENST00000641939		Q8NDZ9	215 aa		9.02	□□□□□ -0.97
PHGDH-231	ENST00000641939	PMCHL2	Q9BQD1	86 aa		9.02	□□□□□ -0.97
PHGDH-231	ENST00000641939	MAP1LC3C	Q9BXW4	147 aa		9.02	□□□□□ -0.97
PHGDH-231	ENST00000641939	LINC00587	B1AMM8	73 aa		9.01	□□□□□ -0.97
PHGDH-231	ENST00000641939	LEPROT	O15243	131 aa		9.01	□□□□□ -0.97
PHGDH-231	ENST00000641939	IGKC	P01834	107 aa		9.01	□□□□□ -0.97
PHGDH-231	ENST00000641939	PLEKHB2	Q96CS7	222 aa		9.01	□□□□□ -0.97
PHGDH-231	ENST00000641939	UBE2A	P49459	152 aa		9	□□□□□ -0.97
PHGDH-231	ENST00000641939	TSPEAR-AS2	P59090	65 aa		9	□□□□□ -0.97
PHGDH-231	ENST00000641939	HERVK_113	P61574	105 aa		9	□□□□□ -0.97
PHGDH-231	ENST00000641939	RPL13A	P40429	203 aa	Known RBP	8.99	□□□□□ -0.97
PHGDH-231	ENST00000641939	KRTAP13-1	Q8IUC0	172 aa		8.99	□□□□□ -0.97
PHGDH-231	ENST00000641939	MIR7-3HG	Q8N6C7	128 aa		8.99	□□□□□ -0.97
PHGDH-231	ENST00000641939		J3QQQ9	107 aa		8.98	□□□□□ -0.97
PHGDH-231	ENST00000641939	TMEM126A	Q9H061	195 aa		8.98	□□□□□ -0.97
PHGDH-231	ENST00000641939	TMEM238	C9JI98	176 aa		8.97	□□□□□ -0.97
PHGDH-231	ENST00000641939	BOD1L2	Q8IYS8	172 aa		8.97	□□□□□ -0.97
PHGDH-231	ENST00000641939		M0R378	163 aa		8.96	□□□□□ -0.98
PHGDH-231	ENST00000641939	NMU	P48645	174 aa		8.96	□□□□□ -0.98
PHGDH-231	ENST00000641939	LRP2	P98164	4655 aa		8.95	□□□□□ -0.98
PHGDH-231	ENST00000641939	SYS1-DBNDD2	H3BUS1	97 aa		8.95	□□□□□ -0.98
PHGDH-231	ENST00000641939	LGALS3	P17931	250 aa	Known RBP	8.95	□□□□□ -0.98
PHGDH-231	ENST00000641939	FAM19A1	Q7Z5A9	133 aa		8.95	□□□□□ -0.98
PHGDH-231	ENST00000641939	UBR4	Q5T4S7	5183 aa		8.94	□□□□□ -0.98
PHGDH-231	ENST00000641939	PRLH	P81277	87 aa		8.94	□□□□□ -0.98
PHGDH-231	ENST00000641939	IGKV2D-26	A0A0A0MRZ7	120 aa		8.92	□□□□□ -0.98
PHGDH-231	ENST00000641939		E9PLD3	99 aa		8.92	□□□□□ -0.98
PHGDH-231	ENST00000641939	NCR3	O14931	201 aa		8.92	□□□□□ -0.98
PHGDH-231	ENST00000641939	COA6	Q5JTJ3	125 aa	Known RBP	8.92	□□□□□ -0.98
PHGDH-231	ENST00000641939	PET117	Q6UWS5	81 aa		8.92	□□□□□ -0.98
PHGDH-231	ENST00000641939	DAND5	Q8N907	189 aa		8.92	□□□□□ -0.98
PHGDH-231	ENST00000641939		A0A087X002	238 aa		8.91	□□□□□ -0.98
PHGDH-231	ENST00000641939	LOC107984156	A0A0G2JMH3	177 aa		8.91	□□□□□ -0.98
PHGDH-231	ENST00000641939	CRYGA	P11844	174 aa		8.91	□□□□□ -0.98
PHGDH-231	ENST00000641939	LINC01545	Q5VT33	79 aa		8.91	□□□□□ -0.98
PHGDH-231	ENST00000641939	ARL17A	Q8IVW1	177 aa		8.91	□□□□□ -0.98
PHGDH-231	ENST00000641939	PRY	O14603	147 aa		8.89	□□□□□ -0.99
PHGDH-231	ENST00000641939	KCNQ1DN	Q9H478	68 aa		8.89	□□□□□ -0.99
PHGDH-231	ENST00000641939	ANAPC11	Q9NYG5	84 aa		8.89	□□□□□ -0.99
PHGDH-231	ENST00000641939		A0A0J9YXY3	114 aa		8.88	□□□□□ -0.99
PHGDH-231	ENST00000641939	C3orf79	P0CE67	100 aa		8.88	□□□□□ -0.99
PHGDH-231	ENST00000641939	FAM229B	Q4G0N7	80 aa		8.88	□□□□□ -0.99
PHGDH-231	ENST00000641939	MIEN1	Q9BRT3	115 aa		8.88	□□□□□ -0.99
PHGDH-231	ENST00000641939	TRBV10-3	A0A0K0K1G6	114 aa		8.87	□□□□□ -0.99
PHGDH-231	ENST00000641939	TYMSOS	Q8TAI1	123 aa		8.87	□□□□□ -0.99
PHGDH-231	ENST00000641939	TRBV10-2	A0A0K0K1G8	114 aa		8.86	□□□□□ -0.99
PHGDH-231	ENST00000641939	SPRR1A	P35321	89 aa		8.86	□□□□□ -0.99
PHGDH-231	ENST00000641939	KRTDAP	P60985	99 aa		8.86	□□□□□ -0.99
PHGDH-231	ENST00000641939	LINC00337	Q8N6G1	96 aa		8.86	□□□□□ -0.99
PHGDH-231	ENST00000641939	HIGD2A	Q9BW72	106 aa		8.86	□□□□□ -0.99
PHGDH-231	ENST00000641939	S100A12	P80511	92 aa		8.85	□□□□□ -0.99
PHGDH-231	ENST00000641939	KRTAP13-2	Q52LG2	175 aa		8.85	□□□□□ -0.99
PHGDH-231	ENST00000641939	ADAMTSL4-AS1	Q5T5F5	129 aa		8.85	□□□□□ -0.99
PHGDH-231	ENST00000641939	SPANXB1	Q9NS25	103 aa	Predicted RBP	8.85	□□□□□ -0.99
PHGDH-231	ENST00000641939	ETDC	A0A1B0GVM5	59 aa		8.84	□□□□□ -0.99
PHGDH-231	ENST00000641939	NDUFC2	O95298	119 aa		8.84	□□□□□ -0.99
PHGDH-231	ENST00000641939	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	8.83	□□□□□ -1
PHGDH-231	ENST00000641939	S100A1	P23297	94 aa		8.83	□□□□□ -1
PHGDH-231	ENST00000641939	DDT	P30046	118 aa		8.83	□□□□□ -1
PHGDH-231	ENST00000641939	NPC2	P61916	151 aa		8.83	□□□□□ -1
PHGDH-231	ENST00000641939	LPA	P08519	4548 aa		8.82	□□□□□ -1
PHGDH-231	ENST00000641939	C20orf202	A1L168	122 aa		8.82	□□□□□ -1
PHGDH-231	ENST00000641939	SOSTDC1	Q6X4U4	206 aa		8.82	□□□□□ -1
PHGDH-231	ENST00000641939	ZNF815P	A8K554	130 aa		8.81	□□□□□ -1
PHGDH-231	ENST00000641939	EIF4EBP3	O60516	100 aa	Predicted RBP	8.81	□□□□□ -1
PHGDH-231	ENST00000641939	TIMM17B	O60830	172 aa		8.81	□□□□□ -1
PHGDH-231	ENST00000641939	TSPAN13	O95857	204 aa		8.81	□□□□□ -1
PHGDH-231	ENST00000641939	S100A7L2	Q5SY68	101 aa		8.81	□□□□□ -1
PHGDH-231	ENST00000641939	ZNF706	Q9Y5V0	76 aa	Predicted RBP	8.81	□□□□□ -1
PHGDH-231	ENST00000641939	IGLV6-57	P01721	117 aa		8.8	□□□□□ -1
PHGDH-231	ENST00000641939	SPRR4	Q96PI1	79 aa		8.8	□□□□□ -1
PHGDH-231	ENST00000641939	LITAF	Q99732	161 aa		8.8	□□□□□ -1
PHGDH-231	ENST00000641939	LINC00308	Q8TCZ7	52 aa		8.79	□□□□□ -1
PHGDH-231	ENST00000641939	TTTY13	Q9BZ97	58 aa		8.79	□□□□□ -1
PHGDH-231	ENST00000641939		B5MCH6	92 aa		8.78	□□□□□ -1
PHGDH-231	ENST00000641939	SMCR5	Q8TEV8	140 aa		8.78	□□□□□ -1
PHGDH-231	ENST00000641939	AKR1D1	P51857	326 aa		8.77	□□□□□ -1.01
PHGDH-231	ENST00000641939	PRR4	Q16378	134 aa		8.77	□□□□□ -1.01
PHGDH-231	ENST00000641939	LINC00304	Q8N9R0	145 aa		8.77	□□□□□ -1.01
PHGDH-231	ENST00000641939	TRAV23DV6	A0A075B6W5	121 aa		8.76	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms