RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 NPC2P61916 151 aa13.6□□□□□ -0.23
TSPAN9-208ENST00000640568 RPL24P83731 157 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-208ENST00000640568 ADAMTSL4-AS1Q5T5F5 129 aa13.6□□□□□ -0.23
TSPAN9-208ENST00000640568 SERTAD4-AS1Q5TG53 156 aa13.6□□□□□ -0.23
TSPAN9-208ENST00000640568 PLA2G2DQ9UNK4 145 aa13.6□□□□□ -0.23
TSPAN9-208ENST00000640568 RYR1P21817 5038 aa13.59□□□□□ -0.23
TSPAN9-208ENST00000640568 M0QXV9 152 aa13.59□□□□□ -0.23
TSPAN9-208ENST00000640568 SMIM6P0DI80 62 aa13.59□□□□□ -0.23
TSPAN9-208ENST00000640568 NKAPP1Q8N9T2 125 aa13.59□□□□□ -0.23
TSPAN9-208ENST00000640568 LITAFQ99732 161 aa13.59□□□□□ -0.23
TSPAN9-208ENST00000640568 HSPG2P98160 4391 aa13.57□□□□□ -0.24
TSPAN9-208ENST00000640568 DLEU1O43261 78 aa13.57□□□□□ -0.24
TSPAN9-208ENST00000640568 SLC25A34Q6PIV7 304 aa13.57□□□□□ -0.24
TSPAN9-208ENST00000640568 SMR3BP02814 79 aaPredicted RBP13.56□□□□□ -0.24
TSPAN9-208ENST00000640568 C7orf33Q8WU49 177 aa13.56□□□□□ -0.24
TSPAN9-208ENST00000640568 SPANXDQ9BXN6 97 aa13.56□□□□□ -0.24
TSPAN9-208ENST00000640568 SPANXCQ9NY87 97 aa13.56□□□□□ -0.24
TSPAN9-208ENST00000640568 TP73-AS1Q9UF72 201 aa13.56□□□□□ -0.24
TSPAN9-208ENST00000640568 KIAA1109Q2LD37 5005 aa13.56□□□□□ -0.24
TSPAN9-208ENST00000640568 EPM2AB3EWF7 344 aa13.55□□□□□ -0.24
TSPAN9-208ENST00000640568 PHF5AQ7RTV0 110 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-208ENST00000640568 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
TSPAN9-208ENST00000640568 Q6ZVH6 145 aa13.55□□□□□ -0.24
TSPAN9-208ENST00000640568 KRTAP7-1Q8IUC3 87 aa13.55□□□□□ -0.24
TSPAN9-208ENST00000640568 COPS9Q8WXC6 57 aa13.55□□□□□ -0.24
TSPAN9-208ENST00000640568 VPREB1P12018 145 aa13.54□□□□□ -0.24
TSPAN9-208ENST00000640568 SRSF9Q13242 221 aaKnown RBP eCLIP13.54□□□□□ -0.24
TSPAN9-208ENST00000640568 LINC00308Q8TCZ7 52 aa13.54□□□□□ -0.24
TSPAN9-208ENST00000640568 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
TSPAN9-208ENST00000640568 LBHQ53QV2 105 aaPredicted RBP13.53□□□□□ -0.24
TSPAN9-208ENST00000640568 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
TSPAN9-208ENST00000640568 IGLV5-37A0A075B6J1 123 aa13.52□□□□□ -0.25
TSPAN9-208ENST00000640568 UBE2BP63146 152 aa13.52□□□□□ -0.25
TSPAN9-208ENST00000640568 MRPL55Q7Z7F7 128 aaKnown RBP13.52□□□□□ -0.25
TSPAN9-208ENST00000640568 LINC00528Q8N1L1 170 aa13.52□□□□□ -0.25
TSPAN9-208ENST00000640568 SOSTDC1Q6X4U4 206 aa13.51□□□□□ -0.25
TSPAN9-208ENST00000640568 SPANXB1Q9NS25 103 aaPredicted RBP13.51□□□□□ -0.25
TSPAN9-208ENST00000640568 IFITM1P13164 125 aa13.5□□□□□ -0.25
TSPAN9-208ENST00000640568 Q8NDZ9 215 aa13.49□□□□□ -0.25
TSPAN9-208ENST00000640568 FAM229AH3BQW9 127 aa13.48□□□□□ -0.25
TSPAN9-208ENST00000640568 NCR3O14931 201 aa13.48□□□□□ -0.25
TSPAN9-208ENST00000640568 GAGE10A6NGK3 116 aa13.48□□□□□ -0.25
TSPAN9-208ENST00000640568 NDUFC2O95298 119 aa13.48□□□□□ -0.25
TSPAN9-208ENST00000640568 HIST1H4GQ99525 98 aa13.48□□□□□ -0.25
TSPAN9-208ENST00000640568 EIF4EBP3O60516 100 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-208ENST00000640568 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
TSPAN9-208ENST00000640568 LINC00167Q96N53 147 aa13.47□□□□□ -0.25
TSPAN9-208ENST00000640568 HIGD1BQ9P298 99 aa13.47□□□□□ -0.25
TSPAN9-208ENST00000640568 UQCR10Q9UDW1 63 aa13.47□□□□□ -0.25
TSPAN9-208ENST00000640568 FAT1Q14517 4588 aa13.46□□□□□ -0.25
TSPAN9-208ENST00000640568 M0R378 163 aa13.46□□□□□ -0.25
TSPAN9-208ENST00000640568 PRR3P79522 188 aaKnown RBP13.45□□□□□ -0.26
TSPAN9-208ENST00000640568 C12orf57Q99622 126 aa13.45□□□□□ -0.26
TSPAN9-208ENST00000640568 RPL37AP61513 92 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-208ENST00000640568 C2orf91Q6ZV80 131 aa13.44□□□□□ -0.26
TSPAN9-208ENST00000640568 PPDPFQ9H3Y8 114 aa13.44□□□□□ -0.26
TSPAN9-208ENST00000640568 RPL37AP8A6NKH3 93 aa13.43□□□□□ -0.26
TSPAN9-208ENST00000640568 Q8N1X5 172 aa13.43□□□□□ -0.26
TSPAN9-208ENST00000640568 Q5VSD8 79 aa13.42□□□□□ -0.26
TSPAN9-208ENST00000640568 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
TSPAN9-208ENST00000640568 TRBV10-2A0A0K0K1G8 114 aa13.42□□□□□ -0.26
TSPAN9-208ENST00000640568 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
TSPAN9-208ENST00000640568 PLA2G1BP04054 148 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-208ENST00000640568 PRO1933Q9H354 126 aa13.42□□□□□ -0.26
TSPAN9-208ENST00000640568 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
TSPAN9-208ENST00000640568 LINC00518Q8N0U6 118 aa13.4□□□□□ -0.26
TSPAN9-208ENST00000640568 PSORS1C2Q9UIG4 136 aa13.4□□□□□ -0.26
TSPAN9-208ENST00000640568 VPS13BQ7Z7G8 4022 aa13.39□□□□□ -0.27
TSPAN9-208ENST00000640568 IGLV1-50A0A075B6I6 118 aa13.38□□□□□ -0.27
TSPAN9-208ENST00000640568 DDTP30046 118 aa13.37□□□□□ -0.27
TSPAN9-208ENST00000640568 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
TSPAN9-208ENST00000640568 TAL2Q16559 108 aa13.37□□□□□ -0.27
TSPAN9-208ENST00000640568 C1orf137Q5JT78 98 aa13.37□□□□□ -0.27
TSPAN9-208ENST00000640568 KRTAP11-1Q8IUC1 163 aa13.37□□□□□ -0.27
TSPAN9-208ENST00000640568 TRBV10-3A0A0K0K1G6 114 aa13.36□□□□□ -0.27
TSPAN9-208ENST00000640568 OR13C6PQ8NH95 151 aa13.36□□□□□ -0.27
TSPAN9-208ENST00000640568 TSTD3H0UI37 97 aa13.36□□□□□ -0.27
TSPAN9-208ENST00000640568 HERC2O95714 4834 aa13.35□□□□□ -0.27
TSPAN9-208ENST00000640568 A4D1N5 150 aa13.35□□□□□ -0.27
TSPAN9-208ENST00000640568 HSD52Q0P140 79 aa13.33□□□□□ -0.28
TSPAN9-208ENST00000640568 REG3GQ6UW15 175 aa13.33□□□□□ -0.28
TSPAN9-208ENST00000640568 CEND1Q8N111 149 aa13.33□□□□□ -0.28
TSPAN9-208ENST00000640568 PRYO14603 147 aa13.32□□□□□ -0.28
TSPAN9-208ENST00000640568 TMEM126AQ9H061 195 aa13.32□□□□□ -0.28
TSPAN9-208ENST00000640568 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
TSPAN9-208ENST00000640568 IGLV6-57P01721 117 aa13.31□□□□□ -0.28
TSPAN9-208ENST00000640568 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
TSPAN9-208ENST00000640568 TRAV13-2A0A0B4J235 113 aa13.3□□□□□ -0.28
TSPAN9-208ENST00000640568 A6NDN8 102 aa13.3□□□□□ -0.28
TSPAN9-208ENST00000640568 KRTAP17-1Q9BYP8 105 aa13.3□□□□□ -0.28
TSPAN9-208ENST00000640568 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
TSPAN9-208ENST00000640568 A6NJY4 79 aa13.29□□□□□ -0.28
TSPAN9-208ENST00000640568 KCNQ1DNQ9H478 68 aa13.29□□□□□ -0.28
TSPAN9-208ENST00000640568 TRAV23DV6A0A075B6W5 121 aa13.29□□□□□ -0.28
TSPAN9-208ENST00000640568 BCE1O60756 84 aa13.29□□□□□ -0.28
TSPAN9-208ENST00000640568 IGLV7-43P04211 117 aa13.27□□□□□ -0.29
TSPAN9-208ENST00000640568 KRTAP10-4P60372 401 aaPredicted RBP13.26□□□□□ -0.29
TSPAN9-208ENST00000640568 FAM19A1Q7Z5A9 133 aa13.26□□□□□ -0.29
TSPAN9-208ENST00000640568 UBE2AP49459 152 aa13.25□□□□□ -0.29
TSPAN9-208ENST00000640568 RAB37Q96AX2 223 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms