RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	TRGV4	A0A0C4DH28	118 aa		4.03	□□□□□ -1.76
NECAP1-222	ENST00000640072	DEFB114	Q30KQ6	69 aa		4.03	□□□□□ -1.76
NECAP1-222	ENST00000640072	VPS13A	Q96RL7	3174 aa		4.03	□□□□□ -1.76
NECAP1-222	ENST00000640072		P0C880	135 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	MINOS1	Q5TGZ0	78 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	WFDC13	Q8IUB5	93 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	LINC00612	Q8N6U2	182 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	SPANXA2-OT1	Q8N9U9	137 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	IGLV5-37	A0A075B6J1	123 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072		G3V318	75 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	NBAS	A2RRP1	2371 aa		4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	RANBP2	P49792	3224 aa	Known RBP	4.02	□□□□□ -1.77
NECAP1-222	ENST00000640072	LINC01558	Q9Y6Z2	57 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	DNAH14	Q0VDD8	3507 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	RIF1	Q5UIP0	2472 aa	Known RBP	4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	ZFHX3	Q15911	3703 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	UNC80	Q8N2C7	3258 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072		H0Y9P7	68 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	DEFB116	Q30KQ4	102 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	TRANK1	O15050	2925 aa		4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	MKI67	P46013	3256 aa	Known RBP	4.01	□□□□□ -1.77
NECAP1-222	ENST00000640072	IGLV8-61	A0A075B6I0	122 aa		4	□□□□□ -1.77
NECAP1-222	ENST00000640072	IGHV4-30-2	A0A087WSY4	118 aa		4	□□□□□ -1.77
NECAP1-222	ENST00000640072	LCE6A	A0A183	80 aa		4	□□□□□ -1.77
NECAP1-222	ENST00000640072		Q6ZSN1	163 aa		4	□□□□□ -1.77
NECAP1-222	ENST00000640072	WFDC10B	Q8IUB3	73 aa		4	□□□□□ -1.77
NECAP1-222	ENST00000640072	SPTAN1	Q13813	2472 aa	Known RBP	4	□□□□□ -1.77
NECAP1-222	ENST00000640072	WNK1	Q9H4A3	2382 aa		4	□□□□□ -1.77
NECAP1-222	ENST00000640072	LAMA2	P24043	3122 aa	Known RBP	4	□□□□□ -1.77
NECAP1-222	ENST00000640072	DNAH10OS	P0CZ25	163 aa		3.99	□□□□□ -1.77
NECAP1-222	ENST00000640072	FREM2	Q5SZK8	3169 aa		3.99	□□□□□ -1.77
NECAP1-222	ENST00000640072		A0A0J9YWU9	116 aa		3.99	□□□□□ -1.77
NECAP1-222	ENST00000640072	DEFB105A	Q8NG35	78 aa		3.99	□□□□□ -1.77
NECAP1-222	ENST00000640072	LINC00483	Q53H64	154 aa		3.98	□□□□□ -1.77
NECAP1-222	ENST00000640072	KAAG1	Q9UBP8	84 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	TRGV1	A0A0A0MS02	117 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072		H3BPC8	53 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	C7orf33	Q8WU49	177 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	KCNQ1DN	Q9H478	68 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	CHD9	Q3L8U1	2897 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	SZT2	Q5T011	3432 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	TNRC18	O15417	2968 aa	Predicted RBP	3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072		A6NDX4	124 aa		3.97	□□□□□ -1.77
NECAP1-222	ENST00000640072	CFAP54	Q96N23	3096 aa		3.96	□□□□□ -1.77
NECAP1-222	ENST00000640072	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.96	□□□□□ -1.78
NECAP1-222	ENST00000640072	TLX1NB	P0CAT3	122 aa		3.96	□□□□□ -1.78
NECAP1-222	ENST00000640072	PCOTH	Q58A44	107 aa		3.96	□□□□□ -1.78
NECAP1-222	ENST00000640072	SPINT4	Q6UDR6	99 aa		3.96	□□□□□ -1.78
NECAP1-222	ENST00000640072	REV3L	O60673	3130 aa		3.95	□□□□□ -1.78
NECAP1-222	ENST00000640072		K7EQZ3	153 aa		3.95	□□□□□ -1.78
NECAP1-222	ENST00000640072	C5orf42	Q9H799	3197 aa		3.95	□□□□□ -1.78
NECAP1-222	ENST00000640072	CASC10	Q5T4H9	136 aa		3.95	□□□□□ -1.78
NECAP1-222	ENST00000640072	SPG11	Q96JI7	2443 aa		3.95	□□□□□ -1.78
NECAP1-222	ENST00000640072	LYNX1	G3V0Z9	82 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072	LYNX1	P0DP58	116 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072	KRTAP25-1	Q3LHN0	102 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072		Q8IZM0	81 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072	IGLV10-54	A0A075B6I4	117 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072	COX17	Q14061	63 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072	CLPSL2	Q6UWE3	100 aa		3.94	□□□□□ -1.78
NECAP1-222	ENST00000640072		A8MUU9	505 aa		3.93	□□□□□ -1.78
NECAP1-222	ENST00000640072	ODF3B	A8MYP8	253 aa		3.93	□□□□□ -1.78
NECAP1-222	ENST00000640072	KPRP	Q5T749	579 aa	Predicted RBP	3.93	□□□□□ -1.78
NECAP1-222	ENST00000640072	ZNF462	Q96JM2	2506 aa		3.93	□□□□□ -1.78
NECAP1-222	ENST00000640072	CHD7	Q9P2D1	2997 aa		3.92	□□□□□ -1.78
NECAP1-222	ENST00000640072	CAMK2N1	Q7Z7J9	78 aa		3.92	□□□□□ -1.78
NECAP1-222	ENST00000640072	CNBP	P62633	177 aa	Known RBP	3.92	□□□□□ -1.78
NECAP1-222	ENST00000640072	VCAN	P13611	3396 aa		3.92	□□□□□ -1.78
NECAP1-222	ENST00000640072	CDH23	Q9H251	3354 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	LINC00959	A0A1B0GUT2	108 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	IGLV1-50	A0A075B6I6	118 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	IGLV7-46	A0A075B6I9	117 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072		A0A1B0GVX0	72 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	PLA2G2A	P14555	144 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	USMG5	Q96IX5	58 aa		3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	3.91	□□□□□ -1.78
NECAP1-222	ENST00000640072	DEFB131A	P59861	70 aa		3.9	□□□□□ -1.78
NECAP1-222	ENST00000640072	C1orf137	Q5JT78	98 aa		3.9	□□□□□ -1.78
NECAP1-222	ENST00000640072		Q8NBF4	154 aa		3.9	□□□□□ -1.78
NECAP1-222	ENST00000640072	FRY	Q5TBA9	3013 aa		3.9	□□□□□ -1.78
NECAP1-222	ENST00000640072	DMAC1	Q96GE9	116 aa		3.9	□□□□□ -1.79
NECAP1-222	ENST00000640072	DSCR10	P59022	87 aa		3.9	□□□□□ -1.79
NECAP1-222	ENST00000640072		A0A1B0GU69	56 aa		3.89	□□□□□ -1.79
NECAP1-222	ENST00000640072	UQCR11	O14957	56 aa		3.89	□□□□□ -1.79
NECAP1-222	ENST00000640072	IGLV6-57	P01721	117 aa		3.89	□□□□□ -1.79
NECAP1-222	ENST00000640072	IGKV2D-24	A0A075B6R9	120 aa		3.88	□□□□□ -1.79
NECAP1-222	ENST00000640072	PRRC2C	Q9Y520	2896 aa	Known RBP	3.88	□□□□□ -1.79
NECAP1-222	ENST00000640072	PLAC8	Q9NZF1	115 aa		3.87	□□□□□ -1.79
NECAP1-222	ENST00000640072	NUPR2	A6NF83	97 aa		3.87	□□□□□ -1.79
NECAP1-222	ENST00000640072	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	LINC01565	O15544	149 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	TRIO	O75962	3097 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072		A0A1W2PNU3	283 aa	Predicted RBP	3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	TMEM105	Q8N8V8	129 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	C9orf163	Q8N9P6	203 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	PRUNE2	Q8WUY3	3088 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072		A0A087WSZ3	146 aa		3.86	□□□□□ -1.79
NECAP1-222	ENST00000640072	WDFY4	Q6ZS81	3184 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms