RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ADCY10Q96PN6 1610 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 PHRF1Q9P1Y6 1649 aaKnown RBP0.82□□□□□ -2.28
CCDC7-216ENST00000640058 UBR3Q6ZT12 1888 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 WIZO95785 1651 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 SPTBP11277 2137 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 CD163L1Q9NR16 1453 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 A0A1B0GU69 56 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 C10orf142B7Z368 130 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 PIN1P1O15428 100 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 HAMPP81172 84 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 NCBP2-AS2Q69YL0 99 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 SPATA8Q6RVD6 105 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 ENHOQ6UWT2 76 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 SMIM11BQ8TCY0 68 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 SPRR4Q96PI1 79 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 ABRACLQ9P1F3 81 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 ASCC3Q8N3C0 2202 aaKnown RBP0.82□□□□□ -2.28
CCDC7-216ENST00000640058 CEP170BQ9Y4F5 1589 aaPredicted RBP0.82□□□□□ -2.28
CCDC7-216ENST00000640058 TSC2P49815 1807 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 LRP6O75581 1613 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 ESPL1Q14674 2120 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 BIVM-ERCC5R4GMW8 1640 aa0.82□□□□□ -2.28
CCDC7-216ENST00000640058 SPAG17Q6Q759 2223 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 LRRC37A2A6NM11 1700 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 RICTORQ6R327 1708 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 COL14A1Q05707 1796 aaKnown RBP0.81□□□□□ -2.28
CCDC7-216ENST00000640058 ABCC6O95255 1503 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 AGLP35573 1532 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 EFCAB6Q5THR3 1501 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 ZMYM4Q5VZL5 1548 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 K7EMI3 77 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 MRPL33O75394 65 aaKnown RBP0.81□□□□□ -2.28
CCDC7-216ENST00000640058 PLNP26678 52 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 SPINK13Q1W4C9 94 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 CCL19Q99731 98 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 NHSL1Q5SYE7 1610 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
CCDC7-216ENST00000640058 BCORQ6W2J9 1755 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 ZNF236Q9UL36 1845 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 KIAA0100Q14667 2235 aaKnown RBP0.8□□□□□ -2.28
CCDC7-216ENST00000640058 SAMD9Q5K651 1589 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 ABCA5Q8WWZ7 1642 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 EIF2AK4Q9P2K8 1649 aaKnown RBP0.8□□□□□ -2.28
CCDC7-216ENST00000640058 A0A087WTM6 91 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 NDUFA4O00483 81 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 COX7BP24311 80 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 SPINK7P58062 85 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 C10orf99Q6UWK7 81 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 OBSCN-AS1Q96MR7 158 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 Q96NJ1 140 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 PLAC8Q9NZF1 115 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 C3P01024 1663 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 POLR1AO95602 1720 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-216ENST00000640058 MYO7BQ6PIF6 2116 aa0.8□□□□□ -2.28
CCDC7-216ENST00000640058 ABCC8Q09428 1581 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 ERCC6L2Q5T890 1561 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 FAM208AQ9UK61 1670 aaKnown RBP0.79□□□□□ -2.28
CCDC7-216ENST00000640058 PARP4Q9UKK3 1724 aaKnown RBP0.79□□□□□ -2.28
CCDC7-216ENST00000640058 SPTY2D1-AS1A0A0U1RR47 76 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 FXYD6P3P58550 94 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 DEFB114Q30KQ6 69 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 LINC00575Q6W349 94 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 Q6ZRX8 168 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 SSBP3-AS1Q7Z2R9 100 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 PLAC4Q8WY50 150 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 TRPM2O94759 1503 aa0.79□□□□□ -2.28
CCDC7-216ENST00000640058 A0A0G2JMZ2 1700 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 NRAPQ86VF7 1730 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 LCE6AA0A183 80 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 ETDCA0A1B0GVM5 59 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 SMIM27A0A1W2PRY6 76 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 H0YGX0 51 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 M0R1W7 72 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 UBE2DNLQ8IWF7 75 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 TET1Q8NFU7 2136 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 LINC00472Q9H8W2 130 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 TIMM8BQ9Y5J9 83 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-216ENST00000640058 MYO7AQ13402 2215 aa0.78□□□□□ -2.28
CCDC7-216ENST00000640058 NRXN3Q9Y4C0 1643 aa0.78□□□□□ -2.29
CCDC7-216ENST00000640058 LY75O60449 1722 aa0.78□□□□□ -2.29
CCDC7-216ENST00000640058 TJP1Q07157 1748 aa0.78□□□□□ -2.29
CCDC7-216ENST00000640058 CDC42BPAQ5VT25 1732 aa0.78□□□□□ -2.29
CCDC7-216ENST00000640058 CNTRLQ7Z7A1 2325 aa0.77□□□□□ -2.29
CCDC7-216ENST00000640058 USMG5Q96IX5 58 aa0.77□□□□□ -2.29
CCDC7-216ENST00000640058 NWD1Q149M9 1564 aa0.77□□□□□ -2.29
CCDC7-216ENST00000640058 LRRC37AA6NMS7 1700 aa0.77□□□□□ -2.29
CCDC7-216ENST00000640058 PAPPA2Q9BXP8 1791 aa0.77□□□□□ -2.29
CCDC7-216ENST00000640058 TULP4Q9NRJ4 1543 aa0.76□□□□□ -2.29
CCDC7-216ENST00000640058 GVQW2A0A096LPI5 108 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-216ENST00000640058 CPSF4LA6NMK7 179 aaKnown RBP0.76□□□□□ -2.29
CCDC7-216ENST00000640058 I3L3M4 83 aa0.76□□□□□ -2.29
CCDC7-216ENST00000640058 KCNQ1DNQ9H478 68 aa0.76□□□□□ -2.29
CCDC7-216ENST00000640058 CRIPTQ9P021 101 aa0.76□□□□□ -2.29
CCDC7-216ENST00000640058 DNAJC13O75165 2243 aa0.76□□□□□ -2.29
CCDC7-216ENST00000640058 DDX60LQ5H9U9 1706 aaKnown RBP0.75□□□□□ -2.29
CCDC7-216ENST00000640058 NFAT5O94916 1531 aa0.75□□□□□ -2.29
CCDC7-216ENST00000640058 DEFB131BA0A096LNP1 70 aa0.75□□□□□ -2.29
CCDC7-216ENST00000640058 A0A096LNT2 108 aa0.75□□□□□ -2.29
CCDC7-216ENST00000640058 LINC00959A0A1B0GUT2 108 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms