RNA–Protein interactions for RNA: ENST00000639920.1

PAX6-260, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-260ENST00000639920 HIST1H2BBP33778 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 RPL28P46779 137 aaKnown RBP6.12□□□□□ -1.43
PAX6-260ENST00000639920 LINC00158P58513 81 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST1H2BDP58876 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST1H2BCP62807 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 RPL24P83731 157 aaKnown RBP6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST2H2BEQ16778 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.12□□□□□ -1.43
PAX6-260ENST00000639920 KRTAP13-1Q8IUC0 172 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST1H2BHQ93079 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST1H2BNQ99877 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 HIST1H2BMQ99879 126 aa6.12□□□□□ -1.43
PAX6-260ENST00000639920 DPM2O94777 84 aa6.11□□□□□ -1.43
PAX6-260ENST00000639920 TSPEAR-AS2P59090 65 aa6.11□□□□□ -1.43
PAX6-260ENST00000639920 HERV-K104P63124 156 aa6.11□□□□□ -1.43
PAX6-260ENST00000639920 NDUFA12Q9UI09 145 aa6.11□□□□□ -1.43
PAX6-260ENST00000639920 IGKV2-28A0A075B6P5 120 aa6.1□□□□□ -1.43
PAX6-260ENST00000639920 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
PAX6-260ENST00000639920 LEPROTO15243 131 aa6.1□□□□□ -1.43
PAX6-260ENST00000639920 IGKV2D-28P01615 120 aa6.1□□□□□ -1.43
PAX6-260ENST00000639920 SMIM13P0DJ93 91 aa6.1□□□□□ -1.43
PAX6-260ENST00000639920 PMCHL2Q9BQD1 86 aa6.1□□□□□ -1.43
PAX6-260ENST00000639920 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
PAX6-260ENST00000639920 IGKCP01834 107 aa6.09□□□□□ -1.43
PAX6-260ENST00000639920 MEIG1Q5JSS6 88 aa6.09□□□□□ -1.43
PAX6-260ENST00000639920 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
PAX6-260ENST00000639920 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.44
PAX6-260ENST00000639920 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
PAX6-260ENST00000639920 J3QQQ9 107 aa6.08□□□□□ -1.44
PAX6-260ENST00000639920 M0R378 163 aa6.08□□□□□ -1.44
PAX6-260ENST00000639920 RPL13AP40429 203 aaKnown RBP6.08□□□□□ -1.44
PAX6-260ENST00000639920 MIR7-3HGQ8N6C7 128 aa6.08□□□□□ -1.44
PAX6-260ENST00000639920 MAP1LC3CQ9BXW4 147 aa6.08□□□□□ -1.44
PAX6-260ENST00000639920 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
PAX6-260ENST00000639920 TMEM238C9JI98 176 aa6.07□□□□□ -1.44
PAX6-260ENST00000639920 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
PAX6-260ENST00000639920 UBE2AP49459 152 aa6.07□□□□□ -1.44
PAX6-260ENST00000639920 HERVK_113P61574 105 aa6.07□□□□□ -1.44
PAX6-260ENST00000639920 SYS1-DBNDD2H3BUS1 97 aa6.06□□□□□ -1.44
PAX6-260ENST00000639920 NMUP48645 174 aa6.06□□□□□ -1.44
PAX6-260ENST00000639920 LRP2P98164 4655 aa6.06□□□□□ -1.44
PAX6-260ENST00000639920 COA6Q5JTJ3 125 aaKnown RBP6.06□□□□□ -1.44
PAX6-260ENST00000639920 BOD1L2Q8IYS8 172 aa6.06□□□□□ -1.44
PAX6-260ENST00000639920 A0A087X002 238 aa6.05□□□□□ -1.44
PAX6-260ENST00000639920 LOC107984156A0A0G2JMH3 177 aa6.05□□□□□ -1.44
PAX6-260ENST00000639920 PRLHP81277 87 aa6.05□□□□□ -1.44
PAX6-260ENST00000639920 LINC01545Q5VT33 79 aa6.05□□□□□ -1.44
PAX6-260ENST00000639920 ARL17AQ8IVW1 177 aa6.05□□□□□ -1.44
PAX6-260ENST00000639920 IGKV2D-26A0A0A0MRZ7 120 aa6.04□□□□□ -1.44
PAX6-260ENST00000639920 E9PLD3 99 aa6.04□□□□□ -1.44
PAX6-260ENST00000639920 LGALS3P17931 250 aaKnown RBP6.04□□□□□ -1.44
PAX6-260ENST00000639920 FAM19A1Q7Z5A9 133 aa6.04□□□□□ -1.44
PAX6-260ENST00000639920 PRYO14603 147 aa6.03□□□□□ -1.44
PAX6-260ENST00000639920 NCR3O14931 201 aa6.03□□□□□ -1.44
PAX6-260ENST00000639920 CRYGAP11844 174 aa6.03□□□□□ -1.44
PAX6-260ENST00000639920 PET117Q6UWS5 81 aa6.03□□□□□ -1.44
PAX6-260ENST00000639920 DAND5Q8N907 189 aa6.03□□□□□ -1.44
PAX6-260ENST00000639920 C3orf79P0CE67 100 aa6.02□□□□□ -1.45
PAX6-260ENST00000639920 SPRR1AP35321 89 aa6.02□□□□□ -1.45
PAX6-260ENST00000639920 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
PAX6-260ENST00000639920 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
PAX6-260ENST00000639920 ANAPC11Q9NYG5 84 aa6.02□□□□□ -1.45
PAX6-260ENST00000639920 A0A0J9YXY3 114 aa6.01□□□□□ -1.45
PAX6-260ENST00000639920 TRBV10-3A0A0K0K1G6 114 aa6.01□□□□□ -1.45
PAX6-260ENST00000639920 TRBV10-2A0A0K0K1G8 114 aa6.01□□□□□ -1.45
PAX6-260ENST00000639920 KRTAP4-16G5E9R7 235 aaPredicted RBP6.01□□□□□ -1.45
PAX6-260ENST00000639920 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
PAX6-260ENST00000639920 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
PAX6-260ENST00000639920 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
PAX6-260ENST00000639920 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
PAX6-260ENST00000639920 NDUFC2O95298 119 aa5.99□□□□□ -1.45
PAX6-260ENST00000639920 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
PAX6-260ENST00000639920 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
PAX6-260ENST00000639920 LITAFQ99732 161 aa5.99□□□□□ -1.45
PAX6-260ENST00000639920 MIEN1Q9BRT3 115 aa5.99□□□□□ -1.45
PAX6-260ENST00000639920 HIGD2AQ9BW72 106 aa5.99□□□□□ -1.45
PAX6-260ENST00000639920 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
PAX6-260ENST00000639920 KRTDAPP60985 99 aa5.98□□□□□ -1.45
PAX6-260ENST00000639920 TIMM17BO60830 172 aa5.97□□□□□ -1.45
PAX6-260ENST00000639920 IGLV6-57P01721 117 aa5.97□□□□□ -1.45
PAX6-260ENST00000639920 DDTP30046 118 aa5.97□□□□□ -1.45
PAX6-260ENST00000639920 SPRR4Q96PI1 79 aa5.97□□□□□ -1.45
PAX6-260ENST00000639920 ETDCA0A1B0GVM5 59 aa5.96□□□□□ -1.46
PAX6-260ENST00000639920 S100A1P23297 94 aa5.96□□□□□ -1.46
PAX6-260ENST00000639920 SMCR5Q8TEV8 140 aa5.96□□□□□ -1.46
PAX6-260ENST00000639920 TTTY13Q9BZ97 58 aa5.96□□□□□ -1.46
PAX6-260ENST00000639920 C20orf202A1L168 122 aa5.95□□□□□ -1.46
PAX6-260ENST00000639920 ZNF815PA8K554 130 aa5.95□□□□□ -1.46
PAX6-260ENST00000639920 B5MCH6 92 aa5.95□□□□□ -1.46
PAX6-260ENST00000639920 NPC2P61916 151 aa5.95□□□□□ -1.46
PAX6-260ENST00000639920 S100A12P80511 92 aa5.95□□□□□ -1.46
PAX6-260ENST00000639920 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
PAX6-260ENST00000639920 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
PAX6-260ENST00000639920 TSPAN13O95857 204 aa5.94□□□□□ -1.46
PAX6-260ENST00000639920 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
PAX6-260ENST00000639920 C3orf22Q8N5N4 141 aa5.94□□□□□ -1.46
PAX6-260ENST00000639920 LINC00304Q8N9R0 145 aa5.94□□□□□ -1.46
PAX6-260ENST00000639920 SPANXCQ9NY87 97 aa5.94□□□□□ -1.46
PAX6-260ENST00000639920 ANKRD39Q53RE8 183 aa5.93□□□□□ -1.46
PAX6-260ENST00000639920 Q6ZRX8 168 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms