RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
PMS1-222ENST00000639501 LINC00269Q8N2A0 174 aa14□□□□□ -0.17
PMS1-222ENST00000639501 HIVEP2P31629 2446 aa14□□□□□ -0.17
PMS1-222ENST00000639501 TRAV10A0A0B4J240 114 aa13.99□□□□□ -0.17
PMS1-222ENST00000639501 RBM3P98179 157 aaKnown RBP13.99□□□□□ -0.17
PMS1-222ENST00000639501 A0A1B0GUV1 79 aa13.99□□□□□ -0.17
PMS1-222ENST00000639501 LINC01547P58512 204 aaPredicted RBP13.99□□□□□ -0.17
PMS1-222ENST00000639501 HIVEP1P15822 2718 aa13.99□□□□□ -0.17
PMS1-222ENST00000639501 ANK3Q12955 4377 aaKnown RBP13.98□□□□□ -0.17
PMS1-222ENST00000639501 LAMTOR3Q9UHA4 124 aa13.97□□□□□ -0.17
PMS1-222ENST00000639501 ZNF561-AS1K7EIQ3 104 aa13.96□□□□□ -0.17
PMS1-222ENST00000639501 HAMPP81172 84 aa13.96□□□□□ -0.17
PMS1-222ENST00000639501 Q6ZVQ6 151 aa13.96□□□□□ -0.17
PMS1-222ENST00000639501 TRAV7A0A075B6U4 112 aa13.96□□□□□ -0.18
PMS1-222ENST00000639501 COX17Q14061 63 aa13.96□□□□□ -0.18
PMS1-222ENST00000639501 SNURFQ9Y675 71 aa13.96□□□□□ -0.18
PMS1-222ENST00000639501 LOC110117498A0A087WWA1 95 aa13.95□□□□□ -0.18
PMS1-222ENST00000639501 DNAJC9-AS1A6NH13 148 aa13.95□□□□□ -0.18
PMS1-222ENST00000639501 LINC00482Q8N8I6 264 aa13.95□□□□□ -0.18
PMS1-222ENST00000639501 C6orf223Q8N319 242 aa13.95□□□□□ -0.18
PMS1-222ENST00000639501 CHCHD10Q8WYQ3 142 aaPredicted RBP13.95□□□□□ -0.18
PMS1-222ENST00000639501 EPM2AB3EWF7 344 aa13.94□□□□□ -0.18
PMS1-222ENST00000639501 C10orf25Q5T742 122 aa13.94□□□□□ -0.18
PMS1-222ENST00000639501 CD164L2Q6UWJ8 174 aa13.93□□□□□ -0.18
PMS1-222ENST00000639501 RMI2Q96E14 147 aa13.93□□□□□ -0.18
PMS1-222ENST00000639501 ESM1Q9NQ30 184 aa13.93□□□□□ -0.18
PMS1-222ENST00000639501 IGHV4-28A0A0C4DH34 117 aa13.92□□□□□ -0.18
PMS1-222ENST00000639501 IGLV1-51P01701 117 aa13.92□□□□□ -0.18
PMS1-222ENST00000639501 NSD1Q96L73 2696 aaPredicted RBP13.92□□□□□ -0.18
PMS1-222ENST00000639501 Q6ZQY7 126 aa13.92□□□□□ -0.18
PMS1-222ENST00000639501 LINC01006Q8NI28 216 aa13.91□□□□□ -0.18
PMS1-222ENST00000639501 KLKP1Q107X0 134 aa13.9□□□□□ -0.18
PMS1-222ENST00000639501 SERP1Q9Y6X1 66 aa13.9□□□□□ -0.18
PMS1-222ENST00000639501 CYSRT1A8MQ03 144 aa13.89□□□□□ -0.19
PMS1-222ENST00000639501 UNQ6190/PRO20217Q6UXQ8 127 aa13.89□□□□□ -0.19
PMS1-222ENST00000639501 SCXQ7RTU7 201 aa13.89□□□□□ -0.19
PMS1-222ENST00000639501 LINC00612Q8N6U2 182 aa13.89□□□□□ -0.19
PMS1-222ENST00000639501 ANGP03950 147 aaKnown RBP13.88□□□□□ -0.19
PMS1-222ENST00000639501 CMC4P56277 68 aaPredicted RBP13.88□□□□□ -0.19
PMS1-222ENST00000639501 REG3AQ06141 175 aa13.87□□□□□ -0.19
PMS1-222ENST00000639501 F8WEM9 126 aa13.86□□□□□ -0.19
PMS1-222ENST00000639501 BCE1O60756 84 aa13.86□□□□□ -0.19
PMS1-222ENST00000639501 PRO0255Q9UI72 69 aa13.86□□□□□ -0.19
PMS1-222ENST00000639501 IGLV6-57P01721 117 aa13.85□□□□□ -0.19
PMS1-222ENST00000639501 F8P00451 2351 aa13.85□□□□□ -0.19
PMS1-222ENST00000639501 TM2D3Q9BRN9 247 aa13.85□□□□□ -0.19
PMS1-222ENST00000639501 MUC7Q8TAX7 377 aa13.84□□□□□ -0.19
PMS1-222ENST00000639501 C9orf66Q5T8R8 295 aa13.84□□□□□ -0.19
PMS1-222ENST00000639501 LINC00336Q6ZUF6 198 aa13.83□□□□□ -0.2
PMS1-222ENST00000639501 CXCL6P80162 114 aa13.82□□□□□ -0.2
PMS1-222ENST00000639501 X6R8D5 127 aa13.82□□□□□ -0.2
PMS1-222ENST00000639501 SPAG11BQ08648 103 aa13.82□□□□□ -0.2
PMS1-222ENST00000639501 FP248Q71RG6 208 aaPredicted RBP13.82□□□□□ -0.2
PMS1-222ENST00000639501 TEP1Q99973 2627 aaKnown RBP13.81□□□□□ -0.2
PMS1-222ENST00000639501 C16orf95Q9H693 158 aa13.8□□□□□ -0.2
PMS1-222ENST00000639501 DEFB4AO15263 64 aa13.79□□□□□ -0.2
PMS1-222ENST00000639501 INAFM1C9JVW0 142 aa13.79□□□□□ -0.2
PMS1-222ENST00000639501 TRBV7-4A0A0J9YYF1 115 aa13.78□□□□□ -0.2
PMS1-222ENST00000639501 XAGE1AQ9HD64 81 aa13.77□□□□□ -0.21
PMS1-222ENST00000639501 LINC00474Q9P2X8 69 aa13.75□□□□□ -0.21
PMS1-222ENST00000639501 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
PMS1-222ENST00000639501 IGHV4-30-4P0DP06 118 aa13.74□□□□□ -0.21
PMS1-222ENST00000639501 PDE6GP18545 87 aa13.74□□□□□ -0.21
PMS1-222ENST00000639501 DIRC1Q969H9 104 aa13.74□□□□□ -0.21
PMS1-222ENST00000639501 Q8N9L7 120 aa13.73□□□□□ -0.21
PMS1-222ENST00000639501 MRAPQ8TCY5 172 aa13.73□□□□□ -0.21
PMS1-222ENST00000639501 NREPQ16612 68 aa13.71□□□□□ -0.21
PMS1-222ENST00000639501 C6orf48Q9UBA6 75 aa13.71□□□□□ -0.21
PMS1-222ENST00000639501 MAST4O15021 2626 aa13.71□□□□□ -0.22
PMS1-222ENST00000639501 SMIM26A0A096LP01 95 aa13.7□□□□□ -0.22
PMS1-222ENST00000639501 TRBV7-6A0A0J9YX20 115 aa13.7□□□□□ -0.22
PMS1-222ENST00000639501 ZNF73O43830 326 aaPredicted RBP13.7□□□□□ -0.22
PMS1-222ENST00000639501 MIFP14174 115 aa13.69□□□□□ -0.22
PMS1-222ENST00000639501 PRO0628Q9UI54 55 aa13.69□□□□□ -0.22
PMS1-222ENST00000639501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.68□□□□□ -0.22
PMS1-222ENST00000639501 COX7BP24311 80 aa13.68□□□□□ -0.22
PMS1-222ENST00000639501 ELOF1P60002 83 aaKnown RBP13.67□□□□□ -0.22
PMS1-222ENST00000639501 VWFP04275 2813 aa13.67□□□□□ -0.22
PMS1-222ENST00000639501 BPY2O14599 106 aa13.67□□□□□ -0.22
PMS1-222ENST00000639501 KLK12Q9UKR0 248 aa13.67□□□□□ -0.22
PMS1-222ENST00000639501 TMEM254Q8TBM7 123 aa13.66□□□□□ -0.22
PMS1-222ENST00000639501 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
PMS1-222ENST00000639501 CELA1Q9UNI1 258 aa13.65□□□□□ -0.22
PMS1-222ENST00000639501 FAM229BQ4G0N7 80 aa13.64□□□□□ -0.23
PMS1-222ENST00000639501 H3BQ85 93 aa13.64□□□□□ -0.23
PMS1-222ENST00000639501 NDUFC1O43677 76 aa13.64□□□□□ -0.23
PMS1-222ENST00000639501 LYRM9A8MSI8 78 aa13.63□□□□□ -0.23
PMS1-222ENST00000639501 GVQW2A0A096LPI5 108 aaPredicted RBP13.62□□□□□ -0.23
PMS1-222ENST00000639501 IGKV4-1P06312 121 aa13.62□□□□□ -0.23
PMS1-222ENST00000639501 PRR34Q9NV39 138 aa13.62□□□□□ -0.23
PMS1-222ENST00000639501 VPREB1P12018 145 aa13.6□□□□□ -0.23
PMS1-222ENST00000639501 DAD1P61803 113 aa13.6□□□□□ -0.23
PMS1-222ENST00000639501 HTN3P15516 51 aa13.6□□□□□ -0.23
PMS1-222ENST00000639501 HIGD2BQ4VC39 106 aa13.58□□□□□ -0.23
PMS1-222ENST00000639501 KRTAP10-3P60369 221 aa13.58□□□□□ -0.24
PMS1-222ENST00000639501 LELP1Q5T871 98 aa13.57□□□□□ -0.24
PMS1-222ENST00000639501 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
PMS1-222ENST00000639501 OCR1Q9BZK8 76 aa13.57□□□□□ -0.24
PMS1-222ENST00000639501 ATRQ13535 2644 aa13.57□□□□□ -0.24
PMS1-222ENST00000639501 TENM1Q9UKZ4 2725 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms