RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 PFN2P35080 140 aa5.82□□□□□ -1.48
SCARB2-214ENST00000638843 UBE2BP63146 152 aa5.82□□□□□ -1.48
SCARB2-214ENST00000638843 TMEM223A0PJW6 202 aa5.81□□□□□ -1.48
SCARB2-214ENST00000638843 H0Y8G0 127 aa5.81□□□□□ -1.48
SCARB2-214ENST00000638843 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
SCARB2-214ENST00000638843 ODF1Q14990 250 aa5.81□□□□□ -1.48
SCARB2-214ENST00000638843 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
SCARB2-214ENST00000638843 ZNF625Q96I27 306 aaPredicted RBP5.81□□□□□ -1.48
SCARB2-214ENST00000638843 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
SCARB2-214ENST00000638843 FABP4P15090 132 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 H3BS24 57 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BKO60814 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BJP06899 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BOP23527 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BBP33778 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BDP58876 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BCP62807 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST2H2BEQ16778 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.8□□□□□ -1.48
SCARB2-214ENST00000638843 REG3GQ6UW15 175 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BHQ93079 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BNQ99877 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 HIST1H2BMQ99879 126 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 ERG28Q9UKR5 140 aa5.8□□□□□ -1.48
SCARB2-214ENST00000638843 LBHQ53QV2 105 aaPredicted RBP5.79□□□□□ -1.48
SCARB2-214ENST00000638843 SND1-IT1Q9HBX3 110 aa5.79□□□□□ -1.48
SCARB2-214ENST00000638843 TP73-AS1Q9UF72 201 aa5.79□□□□□ -1.48
SCARB2-214ENST00000638843 HSPB8Q9UJY1 196 aa5.79□□□□□ -1.48
SCARB2-214ENST00000638843 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
SCARB2-214ENST00000638843 GAGE10A6NGK3 116 aa5.78□□□□□ -1.48
SCARB2-214ENST00000638843 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
SCARB2-214ENST00000638843 COX17Q14061 63 aa5.78□□□□□ -1.48
SCARB2-214ENST00000638843 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
SCARB2-214ENST00000638843 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
SCARB2-214ENST00000638843 PMCHL2Q9BQD1 86 aa5.78□□□□□ -1.48
SCARB2-214ENST00000638843 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
SCARB2-214ENST00000638843 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
SCARB2-214ENST00000638843 SFTA2Q6UW10 78 aa5.77□□□□□ -1.49
SCARB2-214ENST00000638843 A0A0U1RRA0 63 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 Q8NDZ9 215 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 DIRC1Q969H9 104 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 H0Y9J4 135 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 PLNP26678 52 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 LINC00158P58513 81 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 NKAPP1Q8N9T2 125 aa5.76□□□□□ -1.49
SCARB2-214ENST00000638843 ZNF861PO60384 105 aa5.75□□□□□ -1.49
SCARB2-214ENST00000638843 DPM2O94777 84 aa5.75□□□□□ -1.49
SCARB2-214ENST00000638843 VPREB1P12018 145 aa5.75□□□□□ -1.49
SCARB2-214ENST00000638843 MAP1LC3CQ9BXW4 147 aa5.75□□□□□ -1.49
SCARB2-214ENST00000638843 NDUFA12Q9UI09 145 aa5.75□□□□□ -1.49
SCARB2-214ENST00000638843 IGKV2-28A0A075B6P5 120 aa5.74□□□□□ -1.49
SCARB2-214ENST00000638843 IGKV2D-28P01615 120 aa5.74□□□□□ -1.49
SCARB2-214ENST00000638843 SMIM13P0DJ93 91 aa5.74□□□□□ -1.49
SCARB2-214ENST00000638843 BCE1O60756 84 aa5.73□□□□□ -1.49
SCARB2-214ENST00000638843 IGKCP01834 107 aa5.73□□□□□ -1.49
SCARB2-214ENST00000638843 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
SCARB2-214ENST00000638843 RPL24P83731 157 aaKnown RBP5.73□□□□□ -1.49
SCARB2-214ENST00000638843 LRP2P98164 4655 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 MYMXA0A1B0GTQ4 84 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 LEPROTO15243 131 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 HERV-K104P63124 156 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 MEIG1Q5JSS6 88 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 PRR26Q8N8Z3 221 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 IGLV1-50A0A075B6I6 118 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 J3QQQ9 107 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 COA6Q5JTJ3 125 aaKnown RBP5.72□□□□□ -1.49
SCARB2-214ENST00000638843 PLEKHB2Q96CS7 222 aa5.72□□□□□ -1.49
SCARB2-214ENST00000638843 TMEM238C9JI98 176 aa5.71□□□□□ -1.5
SCARB2-214ENST00000638843 ATP6V1G1O75348 118 aa5.71□□□□□ -1.5
SCARB2-214ENST00000638843 RPL28P46779 137 aaKnown RBP5.71□□□□□ -1.5
SCARB2-214ENST00000638843 HERVK_113P61574 105 aa5.71□□□□□ -1.5
SCARB2-214ENST00000638843 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
SCARB2-214ENST00000638843 LINC00587B1AMM8 73 aa5.7□□□□□ -1.5
SCARB2-214ENST00000638843 LINC01545Q5VT33 79 aa5.7□□□□□ -1.5
SCARB2-214ENST00000638843 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
SCARB2-214ENST00000638843 DAND5Q8N907 189 aa5.7□□□□□ -1.5
SCARB2-214ENST00000638843 M0R378 163 aa5.69□□□□□ -1.5
SCARB2-214ENST00000638843 PET117Q6UWS5 81 aa5.69□□□□□ -1.5
SCARB2-214ENST00000638843 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
SCARB2-214ENST00000638843 E9PLD3 99 aa5.68□□□□□ -1.5
SCARB2-214ENST00000638843 C3orf79P0CE67 100 aa5.68□□□□□ -1.5
SCARB2-214ENST00000638843 LGALS3P17931 250 aaKnown RBP5.68□□□□□ -1.5
SCARB2-214ENST00000638843 NMUP48645 174 aa5.68□□□□□ -1.5
SCARB2-214ENST00000638843 S100A1P23297 94 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 UBE2AP49459 152 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 PRLHP81277 87 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 LOC107984156A0A0G2JMH3 177 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 KRTDAPP60985 99 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 ADAMTSL4-AS1Q5T5F5 129 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 ARL17AQ8IVW1 177 aa5.67□□□□□ -1.5
SCARB2-214ENST00000638843 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
SCARB2-214ENST00000638843 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
SCARB2-214ENST00000638843 NCR3O14931 201 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms