RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 NDUFC2O95298 119 aa14.21□□□□□ -0.13
SCARB2-212ENST00000638663 OR13C6PQ8NH95 151 aa14.21□□□□□ -0.14
SCARB2-212ENST00000638663 CARD19Q96LW7 228 aa14.21□□□□□ -0.14
SCARB2-212ENST00000638663 TRBV20-1A0A075B6N2 111 aa14.2□□□□□ -0.14
SCARB2-212ENST00000638663 NDUFC2-KCTD14E9PQ53 114 aa14.2□□□□□ -0.14
SCARB2-212ENST00000638663 WFDC2Q14508 124 aa14.2□□□□□ -0.14
SCARB2-212ENST00000638663 COX6CP09669 75 aa14.19□□□□□ -0.14
SCARB2-212ENST00000638663 TGP01266 2768 aa14.19□□□□□ -0.14
SCARB2-212ENST00000638663 NCR3O14931 201 aa14.17□□□□□ -0.14
SCARB2-212ENST00000638663 GAGE2EQ4V326 116 aa14.17□□□□□ -0.14
SCARB2-212ENST00000638663 GAGE2DQ9UEU5 116 aa14.17□□□□□ -0.14
SCARB2-212ENST00000638663 VPS13DQ5THJ4 4388 aa14.17□□□□□ -0.14
SCARB2-212ENST00000638663 Q6ZRP5 223 aa14.17□□□□□ -0.14
SCARB2-212ENST00000638663 MTURNQ8N3F0 131 aa14.17□□□□□ -0.14
SCARB2-212ENST00000638663 M0R2N4 97 aa14.16□□□□□ -0.14
SCARB2-212ENST00000638663 SMIM11BQ8TCY0 68 aa14.15□□□□□ -0.14
SCARB2-212ENST00000638663 CLEC2BQ92478 149 aa14.15□□□□□ -0.14
SCARB2-212ENST00000638663 WWC2-AS2Q96NR7 200 aa14.15□□□□□ -0.14
SCARB2-212ENST00000638663 DNAH10Q8IVF4 4471 aa14.15□□□□□ -0.14
SCARB2-212ENST00000638663 RNF151Q2KHN1 245 aa14.15□□□□□ -0.14
SCARB2-212ENST00000638663 RPL28P46779 137 aaKnown RBP14.13□□□□□ -0.15
SCARB2-212ENST00000638663 ATXN8Q156A1 80 aa14.13□□□□□ -0.15
SCARB2-212ENST00000638663 RPL18AQ02543 176 aaKnown RBP14.12□□□□□ -0.15
SCARB2-212ENST00000638663 PRO0461Q9UI25 63 aa14.11□□□□□ -0.15
SCARB2-212ENST00000638663 F8W1H4 67 aa14.1□□□□□ -0.15
SCARB2-212ENST00000638663 TLX1NBP0CAT3 122 aa14.09□□□□□ -0.15
SCARB2-212ENST00000638663 Q6ZRN7 208 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-212ENST00000638663 TMEM126AQ9H061 195 aa14.09□□□□□ -0.15
SCARB2-212ENST00000638663 S100A7L2Q5SY68 101 aa14.09□□□□□ -0.15
SCARB2-212ENST00000638663 C9orf129Q5T035 196 aaKnown RBP14.08□□□□□ -0.16
SCARB2-212ENST00000638663 LST1O00453 97 aa14.07□□□□□ -0.16
SCARB2-212ENST00000638663 VPREB1P12018 145 aa14.07□□□□□ -0.16
SCARB2-212ENST00000638663 LINC01620Q4KN68 170 aa14.07□□□□□ -0.16
SCARB2-212ENST00000638663 TRBV10-2A0A0K0K1G8 114 aa14.06□□□□□ -0.16
SCARB2-212ENST00000638663 C14orf177Q52M58 125 aa14.06□□□□□ -0.16
SCARB2-212ENST00000638663 C9JAW5 83 aa14.05□□□□□ -0.16
SCARB2-212ENST00000638663 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-212ENST00000638663 LRCOL1A6NCL2 159 aa14.05□□□□□ -0.16
SCARB2-212ENST00000638663 SMCPP49901 116 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-212ENST00000638663 LY6G6CO95867 125 aa14.04□□□□□ -0.16
SCARB2-212ENST00000638663 CNBPP62633 177 aaKnown RBP14.03□□□□□ -0.16
SCARB2-212ENST00000638663 GAGE2BQ13066 116 aa14.03□□□□□ -0.16
SCARB2-212ENST00000638663 Q6ZR54 194 aa14.03□□□□□ -0.16
SCARB2-212ENST00000638663 FAM218AQ96MZ4 157 aa14.03□□□□□ -0.16
SCARB2-212ENST00000638663 IGLV6-57P01721 117 aa14.03□□□□□ -0.16
SCARB2-212ENST00000638663 LOC107984640A0A0U1RRK4 108 aa14.02□□□□□ -0.16
SCARB2-212ENST00000638663 TRBV10-3A0A0K0K1G6 114 aa14.02□□□□□ -0.17
SCARB2-212ENST00000638663 SLC25A20O43772 301 aa14.01□□□□□ -0.17
SCARB2-212ENST00000638663 H0YGX0 51 aa14□□□□□ -0.17
SCARB2-212ENST00000638663 M0R378 163 aa14□□□□□ -0.17
SCARB2-212ENST00000638663 SERTAD4-AS1Q5TG53 156 aa14□□□□□ -0.17
SCARB2-212ENST00000638663 ETDBQ3ZM63 59 aa13.99□□□□□ -0.17
SCARB2-212ENST00000638663 LINC00476Q8WZB0 136 aa13.98□□□□□ -0.17
SCARB2-212ENST00000638663 C6orf99Q4VX62 202 aa13.98□□□□□ -0.17
SCARB2-212ENST00000638663 A0A087WYN8 130 aa13.97□□□□□ -0.17
SCARB2-212ENST00000638663 FAM168BA1KXE4 195 aa13.96□□□□□ -0.17
SCARB2-212ENST00000638663 C3orf84H3BNL1 204 aa13.96□□□□□ -0.17
SCARB2-212ENST00000638663 NKAPP1Q8N9T2 125 aa13.96□□□□□ -0.17
SCARB2-212ENST00000638663 TRACP01848 142 aa13.96□□□□□ -0.18
SCARB2-212ENST00000638663 KMT2AQ03164 3969 aa13.95□□□□□ -0.18
SCARB2-212ENST00000638663 PLA2G2DQ9UNK4 145 aa13.95□□□□□ -0.18
SCARB2-212ENST00000638663 TRAV23DV6A0A075B6W5 121 aa13.94□□□□□ -0.18
SCARB2-212ENST00000638663 ANKRD29Q8N6D5 301 aa13.94□□□□□ -0.18
SCARB2-212ENST00000638663 Q8N814 137 aa13.93□□□□□ -0.18
SCARB2-212ENST00000638663 A0A096LNI7 61 aa13.92□□□□□ -0.18
SCARB2-212ENST00000638663 OCIAD2Q56VL3 154 aa13.92□□□□□ -0.18
SCARB2-212ENST00000638663 A0A087WTM6 91 aa13.92□□□□□ -0.18
SCARB2-212ENST00000638663 IGKV2-24A0A0C4DH68 120 aa13.92□□□□□ -0.18
SCARB2-212ENST00000638663 C1orf134Q5TEV5 83 aa13.92□□□□□ -0.18
SCARB2-212ENST00000638663 C16orf90A8MZG2 172 aa13.91□□□□□ -0.18
SCARB2-212ENST00000638663 KRTAP7-1Q8IUC3 87 aa13.91□□□□□ -0.18
SCARB2-212ENST00000638663 C7orf33Q8WU49 177 aa13.91□□□□□ -0.18
SCARB2-212ENST00000638663 FAM19A5Q7Z5A7 132 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-212ENST00000638663 M0QXV9 152 aa13.9□□□□□ -0.18
SCARB2-212ENST00000638663 C9orf163Q8N9P6 203 aa13.9□□□□□ -0.18
SCARB2-212ENST00000638663 IGLV5-37A0A075B6J1 123 aa13.89□□□□□ -0.19
SCARB2-212ENST00000638663 H3BT86 120 aa13.89□□□□□ -0.19
SCARB2-212ENST00000638663 ZNF73O43830 326 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-212ENST00000638663 DNAL4O96015 105 aa13.88□□□□□ -0.19
SCARB2-212ENST00000638663 TEN1Q86WV5 123 aa13.88□□□□□ -0.19
SCARB2-212ENST00000638663 DIRC1Q969H9 104 aa13.88□□□□□ -0.19
SCARB2-212ENST00000638663 DNAH2Q9P225 4427 aa13.88□□□□□ -0.19
SCARB2-212ENST00000638663 LINC01600Q96MT4 127 aa13.87□□□□□ -0.19
SCARB2-212ENST00000638663 C22orf24Q9Y442 160 aa13.87□□□□□ -0.19
SCARB2-212ENST00000638663 ALMS1Q8TCU4 4167 aa13.85□□□□□ -0.19
SCARB2-212ENST00000638663 BAALC-AS2P0C853 105 aa13.84□□□□□ -0.19
SCARB2-212ENST00000638663 CBY1Q9Y3M2 126 aa13.84□□□□□ -0.19
SCARB2-212ENST00000638663 RPL37AP8A6NKH3 93 aa13.84□□□□□ -0.19
SCARB2-212ENST00000638663 CHTF8P0CG12 524 aa13.84□□□□□ -0.19
SCARB2-212ENST00000638663 LINC00575Q6W349 94 aa13.84□□□□□ -0.19
SCARB2-212ENST00000638663 K7ERU9 68 aa13.83□□□□□ -0.2
SCARB2-212ENST00000638663 LINC00167Q96N53 147 aa13.83□□□□□ -0.2
SCARB2-212ENST00000638663 A0A1B0GX51 115 aa13.82□□□□□ -0.2
SCARB2-212ENST00000638663 SDIM1Q6ZPB5 146 aa13.82□□□□□ -0.2
SCARB2-212ENST00000638663 MRPL55Q7Z7F7 128 aaKnown RBP13.82□□□□□ -0.2
SCARB2-212ENST00000638663 KCNQ1DNQ9H478 68 aa13.82□□□□□ -0.2
SCARB2-212ENST00000638663 A0A1W2PNN7 141 aa13.82□□□□□ -0.2
SCARB2-212ENST00000638663 DNAH6Q9C0G6 4158 aa13.82□□□□□ -0.2
SCARB2-212ENST00000638663 COX7BP24311 80 aa13.81□□□□□ -0.2
SCARB2-212ENST00000638663 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms