RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 NDUFA5Q16718 116 aa13.32□□□□□ -0.28
CHRNA7-229ENST00000637552 LINC00304Q8N9R0 145 aa13.32□□□□□ -0.28
CHRNA7-229ENST00000637552 M0R378 163 aa13.31□□□□□ -0.28
CHRNA7-229ENST00000637552 SNAPINO95295 136 aa13.31□□□□□ -0.28
CHRNA7-229ENST00000637552 LINC00158P58513 81 aa13.31□□□□□ -0.28
CHRNA7-229ENST00000637552 SVBPQ8N300 66 aa13.3□□□□□ -0.28
CHRNA7-229ENST00000637552 Q8NDZ9 215 aa13.3□□□□□ -0.28
CHRNA7-229ENST00000637552 A0A0U1RRA0 63 aa13.28□□□□□ -0.28
CHRNA7-229ENST00000637552 TMEM223A0PJW6 202 aa13.27□□□□□ -0.29
CHRNA7-229ENST00000637552 CBLN2Q8IUK8 224 aa13.27□□□□□ -0.29
CHRNA7-229ENST00000637552 TRAV12-1A0A0B4J245 112 aa13.26□□□□□ -0.29
CHRNA7-229ENST00000637552 IFI27L1Q96BM0 104 aa13.26□□□□□ -0.29
CHRNA7-229ENST00000637552 CHCHD1Q96BP2 118 aaKnown RBP13.26□□□□□ -0.29
CHRNA7-229ENST00000637552 RETNLBQ9BQ08 111 aa13.26□□□□□ -0.29
CHRNA7-229ENST00000637552 HIGD2AQ9BW72 106 aa13.26□□□□□ -0.29
CHRNA7-229ENST00000637552 ATP6V1G1O75348 118 aa13.25□□□□□ -0.29
CHRNA7-229ENST00000637552 PLEKHB2Q96CS7 222 aa13.24□□□□□ -0.29
CHRNA7-229ENST00000637552 A0A0U1RQV1 116 aa13.23□□□□□ -0.29
CHRNA7-229ENST00000637552 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
CHRNA7-229ENST00000637552 SMIM13P0DJ93 91 aa13.21□□□□□ -0.29
CHRNA7-229ENST00000637552 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
CHRNA7-229ENST00000637552 C3orf22Q8N5N4 141 aa13.19□□□□□ -0.3
CHRNA7-229ENST00000637552 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
CHRNA7-229ENST00000637552 HSBP1O75506 76 aa13.18□□□□□ -0.3
CHRNA7-229ENST00000637552 HERV-K104P63124 156 aa13.18□□□□□ -0.3
CHRNA7-229ENST00000637552 CTAG1AP78358 180 aa13.18□□□□□ -0.3
CHRNA7-229ENST00000637552 PRYO14603 147 aa13.17□□□□□ -0.3
CHRNA7-229ENST00000637552 MIR7-3HGQ8N6C7 128 aa13.17□□□□□ -0.3
CHRNA7-229ENST00000637552 ZNF706Q9Y5V0 76 aaPredicted RBP13.17□□□□□ -0.3
CHRNA7-229ENST00000637552 NCR3O14931 201 aa13.16□□□□□ -0.3
CHRNA7-229ENST00000637552 SPRR4Q96PI1 79 aa13.16□□□□□ -0.3
CHRNA7-229ENST00000637552 LINC00587B1AMM8 73 aa13.15□□□□□ -0.3
CHRNA7-229ENST00000637552 FAM19A2Q8N3H0 131 aa13.15□□□□□ -0.3
CHRNA7-229ENST00000637552 CDIP1Q9H305 208 aa13.15□□□□□ -0.3
CHRNA7-229ENST00000637552 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
CHRNA7-229ENST00000637552 IGLV7-46A0A075B6I9 117 aa13.14□□□□□ -0.31
CHRNA7-229ENST00000637552 H0Y8G0 127 aa13.14□□□□□ -0.31
CHRNA7-229ENST00000637552 TPRXLQ17RH7 258 aa13.13□□□□□ -0.31
CHRNA7-229ENST00000637552 MAP1LC3CQ9BXW4 147 aa13.13□□□□□ -0.31
CHRNA7-229ENST00000637552 MYMXA0A1B0GTQ4 84 aa13.12□□□□□ -0.31
CHRNA7-229ENST00000637552 SPAG11AQ6PDA7 123 aa13.12□□□□□ -0.31
CHRNA7-229ENST00000637552 LINC00337Q8N6G1 96 aa13.12□□□□□ -0.31
CHRNA7-229ENST00000637552 ETDCA0A1B0GVM5 59 aa13.11□□□□□ -0.31
CHRNA7-229ENST00000637552 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
CHRNA7-229ENST00000637552 SPRR1AP35321 89 aa13.09□□□□□ -0.31
CHRNA7-229ENST00000637552 S100A12P80511 92 aa13.09□□□□□ -0.31
CHRNA7-229ENST00000637552 C4orf48Q5BLP8 95 aa13.09□□□□□ -0.31
CHRNA7-229ENST00000637552 TRBV10-3A0A0K0K1G6 114 aa13.08□□□□□ -0.32
CHRNA7-229ENST00000637552 LEPROTL1O95214 131 aa13.08□□□□□ -0.32
CHRNA7-229ENST00000637552 SMCR5Q8TEV8 140 aa13.07□□□□□ -0.32
CHRNA7-229ENST00000637552 MUC17Q685J3 4493 aa13.07□□□□□ -0.32
CHRNA7-229ENST00000637552 PPDPFQ9H3Y8 114 aa13.06□□□□□ -0.32
CHRNA7-229ENST00000637552 LEPROTO15243 131 aa13.05□□□□□ -0.32
CHRNA7-229ENST00000637552 TRGC2P03986 189 aa13.05□□□□□ -0.32
CHRNA7-229ENST00000637552 KRTAP4-16G5E9R7 235 aaPredicted RBP13.04□□□□□ -0.32
CHRNA7-229ENST00000637552 PLNP26678 52 aa13.04□□□□□ -0.32
CHRNA7-229ENST00000637552 TSPEAR-AS2P59090 65 aa13.04□□□□□ -0.32
CHRNA7-229ENST00000637552 DAND5Q8N907 189 aa13.04□□□□□ -0.32
CHRNA7-229ENST00000637552 Q8NBF4 154 aa13.04□□□□□ -0.32
CHRNA7-229ENST00000637552 SERF1AO75920 110 aa13.03□□□□□ -0.32
CHRNA7-229ENST00000637552 FAT4Q6V0I7 4981 aa13.03□□□□□ -0.32
CHRNA7-229ENST00000637552 HERVK_113P61574 105 aa13.02□□□□□ -0.33
CHRNA7-229ENST00000637552 HSPB8Q9UJY1 196 aa13.01□□□□□ -0.33
CHRNA7-229ENST00000637552 J3QQQ9 107 aa13□□□□□ -0.33
CHRNA7-229ENST00000637552 DDTP30046 118 aa13□□□□□ -0.33
CHRNA7-229ENST00000637552 LINC00310P59036 64 aa13□□□□□ -0.33
CHRNA7-229ENST00000637552 FP248Q71RG6 208 aaPredicted RBP13□□□□□ -0.33
CHRNA7-229ENST00000637552 MIEN1Q9BRT3 115 aa13□□□□□ -0.33
CHRNA7-229ENST00000637552 LOC107984156A0A0G2JMH3 177 aa12.99□□□□□ -0.33
CHRNA7-229ENST00000637552 DPM2O94777 84 aa12.99□□□□□ -0.33
CHRNA7-229ENST00000637552 GAGE2AQ6NT46 116 aa12.99□□□□□ -0.33
CHRNA7-229ENST00000637552 ARL17AQ8IVW1 177 aa12.99□□□□□ -0.33
CHRNA7-229ENST00000637552 TRBV10-2A0A0K0K1G8 114 aa12.98□□□□□ -0.33
CHRNA7-229ENST00000637552 B5MCH6 92 aa12.98□□□□□ -0.33
CHRNA7-229ENST00000637552 FABP4P15090 132 aa12.98□□□□□ -0.33
CHRNA7-229ENST00000637552 LGALS3P17931 250 aaKnown RBP12.98□□□□□ -0.33
CHRNA7-229ENST00000637552 NMUP48645 174 aa12.98□□□□□ -0.33
CHRNA7-229ENST00000637552 LINC00483Q53H64 154 aa12.98□□□□□ -0.33
CHRNA7-229ENST00000637552 PMCHL2Q9BQD1 86 aa12.97□□□□□ -0.33
CHRNA7-229ENST00000637552 SPANXB1Q9NS25 103 aaPredicted RBP12.97□□□□□ -0.33
CHRNA7-229ENST00000637552 SPINK1P00995 79 aa12.95□□□□□ -0.34
CHRNA7-229ENST00000637552 IGKCP01834 107 aa12.95□□□□□ -0.34
CHRNA7-229ENST00000637552 S100A7L2Q5SY68 101 aa12.94□□□□□ -0.34
CHRNA7-229ENST00000637552 IGLV9-49A0A0B4J1Y8 123 aa12.93□□□□□ -0.34
CHRNA7-229ENST00000637552 ERC2-IT1O76042 136 aa12.93□□□□□ -0.34
CHRNA7-229ENST00000637552 MOBPQ13875 183 aa12.93□□□□□ -0.34
CHRNA7-229ENST00000637552 Q6ZRX8 168 aa12.93□□□□□ -0.34
CHRNA7-229ENST00000637552 NDUFC2O95298 119 aa12.91□□□□□ -0.34
CHRNA7-229ENST00000637552 Q9BRP9 147 aa12.91□□□□□ -0.34
CHRNA7-229ENST00000637552 IGLV6-57P01721 117 aa12.89□□□□□ -0.35
CHRNA7-229ENST00000637552 LCE2AQ5TA79 106 aaPredicted RBP12.89□□□□□ -0.35
CHRNA7-229ENST00000637552 TRAV23DV6A0A075B6W5 121 aa12.88□□□□□ -0.35
CHRNA7-229ENST00000637552 NPC2P61916 151 aa12.88□□□□□ -0.35
CHRNA7-229ENST00000637552 JOSD1Q15040 202 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-229ENST00000637552 KRTAP13-3Q3SY46 172 aa12.88□□□□□ -0.35
CHRNA7-229ENST00000637552 SSBP3-AS1Q7Z2R9 100 aa12.88□□□□□ -0.35
CHRNA7-229ENST00000637552 A0A0J9YXY3 114 aa12.85□□□□□ -0.35
CHRNA7-229ENST00000637552 RPS29P62273 56 aaKnown RBP12.85□□□□□ -0.35
CHRNA7-229ENST00000637552 COLCA2A8K830 154 aa12.84□□□□□ -0.35
CHRNA7-229ENST00000637552 E9PLD3 99 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms