RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	OR13C6P	Q8NH95	151 aa		10.45	□□□□□ -0.74
CACNA1A-231	ENST00000636816		J3QR89	54 aa		10.45	□□□□□ -0.74
CACNA1A-231	ENST00000636816	KRTAP21-3	Q3LHN1	58 aa		10.45	□□□□□ -0.74
CACNA1A-231	ENST00000636816	C2orf48	Q96LS8	159 aa		10.45	□□□□□ -0.74
CACNA1A-231	ENST00000636816	SMIM11B	Q8TCY0	68 aa		10.44	□□□□□ -0.74
CACNA1A-231	ENST00000636816	XAGE1A	Q9HD64	81 aa		10.44	□□□□□ -0.74
CACNA1A-231	ENST00000636816	NUPR2	A6NF83	97 aa		10.43	□□□□□ -0.74
CACNA1A-231	ENST00000636816	USP17L23	D6RBM5	183 aa		10.43	□□□□□ -0.74
CACNA1A-231	ENST00000636816	LECT2	O14960	151 aa		10.43	□□□□□ -0.74
CACNA1A-231	ENST00000636816	ATXN8	Q156A1	80 aa		10.43	□□□□□ -0.74
CACNA1A-231	ENST00000636816		C9JAW5	83 aa		10.43	□□□□□ -0.74
CACNA1A-231	ENST00000636816	NCR3	O14931	201 aa		10.42	□□□□□ -0.74
CACNA1A-231	ENST00000636816	NDUFC2	O95298	119 aa		10.42	□□□□□ -0.74
CACNA1A-231	ENST00000636816	SLPI	P03973	132 aa		10.42	□□□□□ -0.74
CACNA1A-231	ENST00000636816	RPL28	P46779	137 aa	Known RBP	10.42	□□□□□ -0.74
CACNA1A-231	ENST00000636816	LINC01620	Q4KN68	170 aa		10.42	□□□□□ -0.74
CACNA1A-231	ENST00000636816	SYCN	Q0VAF6	134 aa		10.41	□□□□□ -0.74
CACNA1A-231	ENST00000636816		M0QXV9	152 aa		10.41	□□□□□ -0.74
CACNA1A-231	ENST00000636816	RMI2	Q96E14	147 aa		10.41	□□□□□ -0.74
CACNA1A-231	ENST00000636816	PLEC	Q15149	4684 aa	Known RBP	10.4	□□□□□ -0.74
CACNA1A-231	ENST00000636816	LST1	O00453	97 aa		10.4	□□□□□ -0.74
CACNA1A-231	ENST00000636816	MUC7	Q8TAX7	377 aa		10.39	□□□□□ -0.75
CACNA1A-231	ENST00000636816	FAM218A	Q96MZ4	157 aa		10.39	□□□□□ -0.75
CACNA1A-231	ENST00000636816	LINC01600	Q96MT4	127 aa		10.39	□□□□□ -0.75
CACNA1A-231	ENST00000636816	SLC25A20	O43772	301 aa		10.38	□□□□□ -0.75
CACNA1A-231	ENST00000636816	GAGE2E	Q4V326	116 aa		10.38	□□□□□ -0.75
CACNA1A-231	ENST00000636816	GAGE2D	Q9UEU5	116 aa		10.38	□□□□□ -0.75
CACNA1A-231	ENST00000636816	STARD9	Q9P2P6	4700 aa		10.38	□□□□□ -0.75
CACNA1A-231	ENST00000636816		Q6ZRP5	223 aa		10.37	□□□□□ -0.75
CACNA1A-231	ENST00000636816	NDUFC2-KCTD14	E9PQ53	114 aa		10.37	□□□□□ -0.75
CACNA1A-231	ENST00000636816	TEN1	Q86WV5	123 aa		10.37	□□□□□ -0.75
CACNA1A-231	ENST00000636816		F8WDY8	70 aa		10.36	□□□□□ -0.75
CACNA1A-231	ENST00000636816	RPL18A	Q02543	176 aa	Known RBP	10.35	□□□□□ -0.75
CACNA1A-231	ENST00000636816	CARD19	Q96LW7	228 aa		10.35	□□□□□ -0.75
CACNA1A-231	ENST00000636816	DNAH10	Q8IVF4	4471 aa		10.34	□□□□□ -0.75
CACNA1A-231	ENST00000636816	TRBV10-2	A0A0K0K1G8	114 aa		10.34	□□□□□ -0.75
CACNA1A-231	ENST00000636816	TMEM126A	Q9H061	195 aa		10.34	□□□□□ -0.75
CACNA1A-231	ENST00000636816	FBN3	Q75N90	2809 aa		10.34	□□□□□ -0.75
CACNA1A-231	ENST00000636816	PPDPFL	Q8WWR9	84 aa		10.34	□□□□□ -0.75
CACNA1A-231	ENST00000636816	S100A7L2	Q5SY68	101 aa		10.33	□□□□□ -0.76
CACNA1A-231	ENST00000636816	ANKRD29	Q8N6D5	301 aa		10.33	□□□□□ -0.76
CACNA1A-231	ENST00000636816		A0A087WYN8	130 aa		10.32	□□□□□ -0.76
CACNA1A-231	ENST00000636816	C9orf129	Q5T035	196 aa	Known RBP	10.32	□□□□□ -0.76
CACNA1A-231	ENST00000636816	NBDY	A0A0U1RRE5	68 aa		10.32	□□□□□ -0.76
CACNA1A-231	ENST00000636816	PSCA	O43653	123 aa		10.32	□□□□□ -0.76
CACNA1A-231	ENST00000636816	VPREB1	P12018	145 aa		10.32	□□□□□ -0.76
CACNA1A-231	ENST00000636816	IGLV6-57	P01721	117 aa		10.3	□□□□□ -0.76
CACNA1A-231	ENST00000636816	SIGMAR1	Q99720	223 aa		10.3	□□□□□ -0.76
CACNA1A-231	ENST00000636816	TRBV10-3	A0A0K0K1G6	114 aa		10.29	□□□□□ -0.76
CACNA1A-231	ENST00000636816		H0YGX0	51 aa		10.29	□□□□□ -0.76
CACNA1A-231	ENST00000636816	TRAC	P01848	142 aa		10.29	□□□□□ -0.76
CACNA1A-231	ENST00000636816		M0R2N4	97 aa		10.28	□□□□□ -0.76
CACNA1A-231	ENST00000636816	C6orf99	Q4VX62	202 aa		10.28	□□□□□ -0.76
CACNA1A-231	ENST00000636816	TLX1NB	P0CAT3	122 aa		10.28	□□□□□ -0.76
CACNA1A-231	ENST00000636816	TG	P01266	2768 aa		10.27	□□□□□ -0.77
CACNA1A-231	ENST00000636816	SERTAD4-AS1	Q5TG53	156 aa		10.26	□□□□□ -0.77
CACNA1A-231	ENST00000636816		H3BT86	120 aa		10.26	□□□□□ -0.77
CACNA1A-231	ENST00000636816	VPS13D	Q5THJ4	4388 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	FAM168B	A1KXE4	195 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	GAGE2B	Q13066	116 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	TTC32	Q5I0X7	151 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	TEX49	A0A1B0GTD5	131 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	BAALC-AS2	P0C853	105 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	SCGB1A1	P11684	91 aa		10.25	□□□□□ -0.77
CACNA1A-231	ENST00000636816	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-231	ENST00000636816		M0R378	163 aa		10.24	□□□□□ -0.77
CACNA1A-231	ENST00000636816		Q6ZRN7	208 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-231	ENST00000636816	CDIP1	Q9H305	208 aa		10.24	□□□□□ -0.77
CACNA1A-231	ENST00000636816	C22orf24	Q9Y442	160 aa		10.24	□□□□□ -0.77
CACNA1A-231	ENST00000636816	TRAV23DV6	A0A075B6W5	121 aa		10.23	□□□□□ -0.77
CACNA1A-231	ENST00000636816	LRCOL1	A6NCL2	159 aa		10.23	□□□□□ -0.77
CACNA1A-231	ENST00000636816	KRTAP7-1	Q8IUC3	87 aa		10.22	□□□□□ -0.77
CACNA1A-231	ENST00000636816	LOC107984640	A0A0U1RRK4	108 aa		10.21	□□□□□ -0.78
CACNA1A-231	ENST00000636816	DNAL4	O96015	105 aa		10.2	□□□□□ -0.78
CACNA1A-231	ENST00000636816	CNBP	P62633	177 aa	Known RBP	10.2	□□□□□ -0.78
CACNA1A-231	ENST00000636816		Q8N814	137 aa		10.2	□□□□□ -0.78
CACNA1A-231	ENST00000636816	C7orf33	Q8WU49	177 aa		10.19	□□□□□ -0.78
CACNA1A-231	ENST00000636816	ZNF73	O43830	326 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNA1A-231	ENST00000636816	LINC00575	Q6W349	94 aa		10.19	□□□□□ -0.78
CACNA1A-231	ENST00000636816	NKAPP1	Q8N9T2	125 aa		10.19	□□□□□ -0.78
CACNA1A-231	ENST00000636816	KMT2A	Q03164	3969 aa		10.18	□□□□□ -0.78
CACNA1A-231	ENST00000636816	PLA2G2D	Q9UNK4	145 aa		10.18	□□□□□ -0.78
CACNA1A-231	ENST00000636816		A0A096LNI7	61 aa		10.17	□□□□□ -0.78
CACNA1A-231	ENST00000636816	DIRC1	Q969H9	104 aa		10.17	□□□□□ -0.78
CACNA1A-231	ENST00000636816	C14orf177	Q52M58	125 aa		10.17	□□□□□ -0.78
CACNA1A-231	ENST00000636816		Q6ZR54	194 aa		10.16	□□□□□ -0.78
CACNA1A-231	ENST00000636816	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.16	□□□□□ -0.78
CACNA1A-231	ENST00000636816	LINC00167	Q96N53	147 aa		10.16	□□□□□ -0.78
CACNA1A-231	ENST00000636816	RPL37AP8	A6NKH3	93 aa		10.15	□□□□□ -0.78
CACNA1A-231	ENST00000636816	IGKV2-24	A0A0C4DH68	120 aa		10.15	□□□□□ -0.78
CACNA1A-231	ENST00000636816	IGLV5-37	A0A075B6J1	123 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816		A0A1B0GX51	115 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816	WWC2-AS2	Q96NR7	200 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816	hADV29S1	A0JD25	119 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816	LY6G6C	O95867	125 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816	COX7B	P24311	80 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816	ORMDL1	Q9P0S3	153 aa		10.14	□□□□□ -0.79
CACNA1A-231	ENST00000636816	C16orf90	A8MZG2	172 aa		10.12	□□□□□ -0.79
CACNA1A-231	ENST00000636816	XG	P55808	180 aa		10.12	□□□□□ -0.79
CACNA1A-231	ENST00000636816	ELOF1	P60002	83 aa	Known RBP	10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms