RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
CACNA1A-228ENST00000636610 BAHCC1Q9P281 2608 aa9.53□□□□□ -0.88
CACNA1A-228ENST00000636610 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
CACNA1A-228ENST00000636610 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
CACNA1A-228ENST00000636610 M0R2N4 97 aa9.51□□□□□ -0.89
CACNA1A-228ENST00000636610 LYRM9A8MSI8 78 aa9.51□□□□□ -0.89
CACNA1A-228ENST00000636610 FAM19A1Q7Z5A9 133 aa9.51□□□□□ -0.89
CACNA1A-228ENST00000636610 NBEAL1Q6ZS30 2694 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 C9orf66Q5T8R8 295 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
CACNA1A-228ENST00000636610 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
CACNA1A-228ENST00000636610 Q8NAQ8 132 aa9.49□□□□□ -0.89
CACNA1A-228ENST00000636610 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 UQCRQO14949 82 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 CCKP06307 115 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 APOC4P55056 127 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 SPART-AS1P0CW21 52 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 Q6ZQY7 126 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
CACNA1A-228ENST00000636610 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
CACNA1A-228ENST00000636610 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
CACNA1A-228ENST00000636610 TMEM256-PLSCR3K7ERE1 68 aa9.47□□□□□ -0.89
CACNA1A-228ENST00000636610 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
CACNA1A-228ENST00000636610 COX7CP15954 63 aa9.46□□□□□ -0.89
CACNA1A-228ENST00000636610 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
CACNA1A-228ENST00000636610 HAMPP81172 84 aa9.45□□□□□ -0.9
CACNA1A-228ENST00000636610 Q6JHZ5 121 aa9.45□□□□□ -0.9
CACNA1A-228ENST00000636610 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
CACNA1A-228ENST00000636610 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
CACNA1A-228ENST00000636610 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
CACNA1A-228ENST00000636610 ATOX1O00244 68 aa9.44□□□□□ -0.9
CACNA1A-228ENST00000636610 COX17Q14061 63 aa9.44□□□□□ -0.9
CACNA1A-228ENST00000636610 NDUFC2O95298 119 aa9.43□□□□□ -0.9
CACNA1A-228ENST00000636610 LELP1Q5T871 98 aa9.43□□□□□ -0.9
CACNA1A-228ENST00000636610 RBM3P98179 157 aaKnown RBP9.42□□□□□ -0.9
CACNA1A-228ENST00000636610 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
CACNA1A-228ENST00000636610 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-228ENST00000636610 JMJD7-PLA2G4BH0Y9G9 81 aa9.42□□□□□ -0.9
CACNA1A-228ENST00000636610 ANK2Q01484 3957 aa9.41□□□□□ -0.9
CACNA1A-228ENST00000636610 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
CACNA1A-228ENST00000636610 CAMK2N2Q96S95 79 aa9.41□□□□□ -0.9
CACNA1A-228ENST00000636610 MIFP14174 115 aa9.4□□□□□ -0.9
CACNA1A-228ENST00000636610 Q6ZTC4 211 aa9.4□□□□□ -0.9
CACNA1A-228ENST00000636610 UBL5Q9BZL1 73 aa9.4□□□□□ -0.9
CACNA1A-228ENST00000636610 GHRHP01286 108 aa9.39□□□□□ -0.91
CACNA1A-228ENST00000636610 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-228ENST00000636610 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
CACNA1A-228ENST00000636610 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
CACNA1A-228ENST00000636610 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
CACNA1A-228ENST00000636610 Q6ZRU5 148 aa9.37□□□□□ -0.91
CACNA1A-228ENST00000636610 SERP2Q8N6R1 65 aa9.37□□□□□ -0.91
CACNA1A-228ENST00000636610 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
CACNA1A-228ENST00000636610 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
CACNA1A-228ENST00000636610 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
CACNA1A-228ENST00000636610 A0A0J9YWU9 116 aa9.36□□□□□ -0.91
CACNA1A-228ENST00000636610 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-228ENST00000636610 Q6ZQT0 140 aa9.36□□□□□ -0.91
CACNA1A-228ENST00000636610 PRB2P02812 416 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-228ENST00000636610 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
CACNA1A-228ENST00000636610 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
CACNA1A-228ENST00000636610 C20orf197Q8N268 126 aa9.34□□□□□ -0.91
CACNA1A-228ENST00000636610 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
CACNA1A-228ENST00000636610 CRYGAP11844 174 aa9.33□□□□□ -0.92
CACNA1A-228ENST00000636610 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
CACNA1A-228ENST00000636610 ESRGQ1W209 222 aa9.33□□□□□ -0.92
CACNA1A-228ENST00000636610 COX7BP24311 80 aa9.32□□□□□ -0.92
CACNA1A-228ENST00000636610 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
CACNA1A-228ENST00000636610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
CACNA1A-228ENST00000636610 Q8N9L7 120 aa9.32□□□□□ -0.92
CACNA1A-228ENST00000636610 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-228ENST00000636610 Q6ZVQ6 151 aa9.31□□□□□ -0.92
CACNA1A-228ENST00000636610 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
CACNA1A-228ENST00000636610 Q6ZRP5 223 aa9.29□□□□□ -0.92
CACNA1A-228ENST00000636610 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
CACNA1A-228ENST00000636610 MUC7Q8TAX7 377 aa9.29□□□□□ -0.92
CACNA1A-228ENST00000636610 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
CACNA1A-228ENST00000636610 SNURFQ9Y675 71 aa9.29□□□□□ -0.92
CACNA1A-228ENST00000636610 VPREB1P12018 145 aa9.29□□□□□ -0.92
CACNA1A-228ENST00000636610 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
CACNA1A-228ENST00000636610 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
CACNA1A-228ENST00000636610 FAM19A5Q7Z5A7 132 aaPredicted RBP9.27□□□□□ -0.93
CACNA1A-228ENST00000636610 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
CACNA1A-228ENST00000636610 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
CACNA1A-228ENST00000636610 J3KT08 172 aa9.25□□□□□ -0.93
CACNA1A-228ENST00000636610 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
CACNA1A-228ENST00000636610 FAM168BA1KXE4 195 aa9.24□□□□□ -0.93
CACNA1A-228ENST00000636610 OXTP01178 125 aa9.24□□□□□ -0.93
CACNA1A-228ENST00000636610 ELOF1P60002 83 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-228ENST00000636610 CASC10Q5T4H9 136 aa9.24□□□□□ -0.93
CACNA1A-228ENST00000636610 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
CACNA1A-228ENST00000636610 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
CACNA1A-228ENST00000636610 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
CACNA1A-228ENST00000636610 DPH3Q96FX2 82 aa9.23□□□□□ -0.93
CACNA1A-228ENST00000636610 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms