RNA–Protein interactions for RNA: ENST00000636044.1

CHRNA7-209, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-209ENST00000636044 IGKV2D-28P01615 120 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 KRTAP1-4P0C5Y4 121 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 RPL28P46779 137 aaKnown RBP12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
CHRNA7-209ENST00000636044 HERV-K104P63124 156 aa12.38□□□□□ -0.43
CHRNA7-209ENST00000636044 Q8NDZ9 215 aa12.38□□□□□ -0.43
CHRNA7-209ENST00000636044 PMCHL2Q9BQD1 86 aa12.38□□□□□ -0.43
CHRNA7-209ENST00000636044 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
CHRNA7-209ENST00000636044 MAP1LC3CQ9BXW4 147 aa12.37□□□□□ -0.43
CHRNA7-209ENST00000636044 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
CHRNA7-209ENST00000636044 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
CHRNA7-209ENST00000636044 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
CHRNA7-209ENST00000636044 MYMXA0A1B0GTQ4 84 aa12.35□□□□□ -0.43
CHRNA7-209ENST00000636044 LEPROTO15243 131 aa12.35□□□□□ -0.43
CHRNA7-209ENST00000636044 IGKCP01834 107 aa12.35□□□□□ -0.43
CHRNA7-209ENST00000636044 HERVK_113P61574 105 aa12.35□□□□□ -0.43
CHRNA7-209ENST00000636044 PLEKHB2Q96CS7 222 aa12.35□□□□□ -0.43
CHRNA7-209ENST00000636044 UBE2AP49459 152 aa12.34□□□□□ -0.43
CHRNA7-209ENST00000636044 MIR7-3HGQ8N6C7 128 aa12.33□□□□□ -0.44
CHRNA7-209ENST00000636044 LINC00587B1AMM8 73 aa12.32□□□□□ -0.44
CHRNA7-209ENST00000636044 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
CHRNA7-209ENST00000636044 J3QQQ9 107 aa12.31□□□□□ -0.44
CHRNA7-209ENST00000636044 KRTAP13-1Q8IUC0 172 aa12.31□□□□□ -0.44
CHRNA7-209ENST00000636044 RPL13AP40429 203 aaKnown RBP12.3□□□□□ -0.44
CHRNA7-209ENST00000636044 BOD1L2Q8IYS8 172 aa12.3□□□□□ -0.44
CHRNA7-209ENST00000636044 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
CHRNA7-209ENST00000636044 LGALS3P17931 250 aaKnown RBP12.29□□□□□ -0.44
CHRNA7-209ENST00000636044 SYS1-DBNDD2H3BUS1 97 aa12.28□□□□□ -0.44
CHRNA7-209ENST00000636044 PRLHP81277 87 aa12.28□□□□□ -0.44
CHRNA7-209ENST00000636044 M0R378 163 aa12.27□□□□□ -0.45
CHRNA7-209ENST00000636044 NMUP48645 174 aa12.27□□□□□ -0.45
CHRNA7-209ENST00000636044 FAM19A1Q7Z5A9 133 aa12.27□□□□□ -0.45
CHRNA7-209ENST00000636044 NCR3O14931 201 aa12.26□□□□□ -0.45
CHRNA7-209ENST00000636044 DAND5Q8N907 189 aa12.25□□□□□ -0.45
CHRNA7-209ENST00000636044 E9PLD3 99 aa12.23□□□□□ -0.45
CHRNA7-209ENST00000636044 COA6Q5JTJ3 125 aaKnown RBP12.23□□□□□ -0.45
CHRNA7-209ENST00000636044 LINC01545Q5VT33 79 aa12.23□□□□□ -0.45
CHRNA7-209ENST00000636044 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
CHRNA7-209ENST00000636044 A0A087X002 238 aa12.21□□□□□ -0.45
CHRNA7-209ENST00000636044 PET117Q6UWS5 81 aa12.21□□□□□ -0.45
CHRNA7-209ENST00000636044 UBR4Q5T4S7 5183 aa12.21□□□□□ -0.46
CHRNA7-209ENST00000636044 PRYO14603 147 aa12.2□□□□□ -0.46
CHRNA7-209ENST00000636044 CRYGAP11844 174 aa12.2□□□□□ -0.46
CHRNA7-209ENST00000636044 MIEN1Q9BRT3 115 aa12.2□□□□□ -0.46
CHRNA7-209ENST00000636044 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
CHRNA7-209ENST00000636044 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
CHRNA7-209ENST00000636044 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
CHRNA7-209ENST00000636044 ANAPC11Q9NYG5 84 aa12.18□□□□□ -0.46
CHRNA7-209ENST00000636044 LRP2P98164 4655 aa12.17□□□□□ -0.46
CHRNA7-209ENST00000636044 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
CHRNA7-209ENST00000636044 KRTDAPP60985 99 aa12.17□□□□□ -0.46
CHRNA7-209ENST00000636044 HIGD2AQ9BW72 106 aa12.17□□□□□ -0.46
CHRNA7-209ENST00000636044 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
CHRNA7-209ENST00000636044 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
CHRNA7-209ENST00000636044 TYMSOSQ8TAI1 123 aa12.15□□□□□ -0.46
CHRNA7-209ENST00000636044 KCNQ1DNQ9H478 68 aa12.15□□□□□ -0.46
CHRNA7-209ENST00000636044 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
CHRNA7-209ENST00000636044 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
CHRNA7-209ENST00000636044 SPRR1AP35321 89 aa12.13□□□□□ -0.47
CHRNA7-209ENST00000636044 S100A12P80511 92 aa12.13□□□□□ -0.47
CHRNA7-209ENST00000636044 LINC00337Q8N6G1 96 aa12.13□□□□□ -0.47
CHRNA7-209ENST00000636044 NPC2P61916 151 aa12.12□□□□□ -0.47
CHRNA7-209ENST00000636044 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
CHRNA7-209ENST00000636044 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 C20orf202A1L168 122 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 NDUFC2O95298 119 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 S100A1P23297 94 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 DDTP30046 118 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 KRTAP13-2Q52LG2 175 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 SOSTDC1Q6X4U4 206 aa12.11□□□□□ -0.47
CHRNA7-209ENST00000636044 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
CHRNA7-209ENST00000636044 KRTAP4-16G5E9R7 235 aaPredicted RBP12.09□□□□□ -0.47
CHRNA7-209ENST00000636044 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
CHRNA7-209ENST00000636044 S100A7L2Q5SY68 101 aa12.08□□□□□ -0.48
CHRNA7-209ENST00000636044 LITAFQ99732 161 aa12.08□□□□□ -0.48
CHRNA7-209ENST00000636044 TIMM17BO60830 172 aa12.07□□□□□ -0.48
CHRNA7-209ENST00000636044 TSPAN13O95857 204 aa12.07□□□□□ -0.48
CHRNA7-209ENST00000636044 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
CHRNA7-209ENST00000636044 SPRR4Q96PI1 79 aa12.06□□□□□ -0.48
CHRNA7-209ENST00000636044 ZNF706Q9Y5V0 76 aaPredicted RBP12.06□□□□□ -0.48
CHRNA7-209ENST00000636044 IGLV6-57P01721 117 aa12.05□□□□□ -0.48
CHRNA7-209ENST00000636044 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
CHRNA7-209ENST00000636044 B5MCH6 92 aa12.03□□□□□ -0.48
CHRNA7-209ENST00000636044 ATOH7Q8N100 152 aa12.03□□□□□ -0.48
CHRNA7-209ENST00000636044 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
CHRNA7-209ENST00000636044 SMCR5Q8TEV8 140 aa12.03□□□□□ -0.48
CHRNA7-209ENST00000636044 TRAV23DV6A0A075B6W5 121 aa12.02□□□□□ -0.49
CHRNA7-209ENST00000636044 PRR4Q16378 134 aa12.02□□□□□ -0.49
CHRNA7-209ENST00000636044 SPANXCQ9NY87 97 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms