RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 LINC00313P59037 77 aa6.8□□□□□ -1.32
SPTAN1-228ENST00000635853 PLCE1Q9P212 2302 aa6.8□□□□□ -1.32
SPTAN1-228ENST00000635853 BDP1A6H8Y1 2624 aa6.8□□□□□ -1.32
SPTAN1-228ENST00000635853 H3BPC8 53 aa6.8□□□□□ -1.32
SPTAN1-228ENST00000635853 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 Q6ZRP5 223 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 Q96NJ1 140 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 PRO3102Q9H379 93 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 ATRXP46100 2492 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
SPTAN1-228ENST00000635853 UTRNP46939 3433 aa6.78□□□□□ -1.32
SPTAN1-228ENST00000635853 PRRC2AP48634 2157 aaKnown RBP6.78□□□□□ -1.32
SPTAN1-228ENST00000635853 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
SPTAN1-228ENST00000635853 TP53AIP1Q9HCN2 124 aa6.78□□□□□ -1.32
SPTAN1-228ENST00000635853 Q8NBF4 154 aa6.78□□□□□ -1.32
SPTAN1-228ENST00000635853 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
SPTAN1-228ENST00000635853 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
SPTAN1-228ENST00000635853 LINC00167Q96N53 147 aa6.77□□□□□ -1.33
SPTAN1-228ENST00000635853 WWC2-AS2Q96NR7 200 aa6.77□□□□□ -1.33
SPTAN1-228ENST00000635853 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
SPTAN1-228ENST00000635853 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
SPTAN1-228ENST00000635853 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
SPTAN1-228ENST00000635853 ARHGAP32A7KAX9 2087 aa6.75□□□□□ -1.33
SPTAN1-228ENST00000635853 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
SPTAN1-228ENST00000635853 TTC28Q96AY4 2481 aa6.75□□□□□ -1.33
SPTAN1-228ENST00000635853 ELOF1P60002 83 aaKnown RBP6.75□□□□□ -1.33
SPTAN1-228ENST00000635853 NBDYA0A0U1RRE5 68 aa6.75□□□□□ -1.33
SPTAN1-228ENST00000635853 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
SPTAN1-228ENST00000635853 IGLV8-61A0A075B6I0 122 aa6.74□□□□□ -1.33
SPTAN1-228ENST00000635853 PRR14LQ5THK1 2151 aa6.73□□□□□ -1.33
SPTAN1-228ENST00000635853 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
SPTAN1-228ENST00000635853 BPTFQ12830 3046 aa6.72□□□□□ -1.33
SPTAN1-228ENST00000635853 KLK9Q2XQG4 91 aa6.72□□□□□ -1.33
SPTAN1-228ENST00000635853 GOLGB1Q14789 3259 aaKnown RBP6.71□□□□□ -1.33
SPTAN1-228ENST00000635853 NAV3Q8IVL0 2385 aa6.71□□□□□ -1.33
SPTAN1-228ENST00000635853 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
SPTAN1-228ENST00000635853 TECTAO75443 2155 aa6.7□□□□□ -1.34
SPTAN1-228ENST00000635853 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
SPTAN1-228ENST00000635853 ZNF575Q86XF7 245 aa6.7□□□□□ -1.34
SPTAN1-228ENST00000635853 KRTAP24-1Q3LI83 254 aa6.7□□□□□ -1.34
SPTAN1-228ENST00000635853 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
SPTAN1-228ENST00000635853 PLXNB1O43157 2135 aa6.69□□□□□ -1.34
SPTAN1-228ENST00000635853 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
SPTAN1-228ENST00000635853 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
SPTAN1-228ENST00000635853 OTOGLQ3ZCN5 2332 aa6.68□□□□□ -1.34
SPTAN1-228ENST00000635853 EP400Q96L91 3159 aa6.68□□□□□ -1.34
SPTAN1-228ENST00000635853 COA5Q86WW8 74 aa6.68□□□□□ -1.34
SPTAN1-228ENST00000635853 CUL9Q8IWT3 2517 aa6.67□□□□□ -1.34
SPTAN1-228ENST00000635853 ACACBO00763 2458 aa6.67□□□□□ -1.34
SPTAN1-228ENST00000635853 A0A1W2PPR1 153 aa6.67□□□□□ -1.34
SPTAN1-228ENST00000635853 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
SPTAN1-228ENST00000635853 SSBP3-AS1Q7Z2R9 100 aa6.66□□□□□ -1.34
SPTAN1-228ENST00000635853 H3BNG1 76 aa6.66□□□□□ -1.34
SPTAN1-228ENST00000635853 H3BS24 57 aa6.66□□□□□ -1.34
SPTAN1-228ENST00000635853 IGLV6-57P01721 117 aa6.65□□□□□ -1.34
SPTAN1-228ENST00000635853 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
SPTAN1-228ENST00000635853 LINC00588Q9Y4M8 146 aa6.64□□□□□ -1.35
SPTAN1-228ENST00000635853 Q6ZRX8 168 aa6.63□□□□□ -1.35
SPTAN1-228ENST00000635853 OCR1Q9BZK8 76 aa6.63□□□□□ -1.35
SPTAN1-228ENST00000635853 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
SPTAN1-228ENST00000635853 PTPN13Q12923 2485 aa6.62□□□□□ -1.35
SPTAN1-228ENST00000635853 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
SPTAN1-228ENST00000635853 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
SPTAN1-228ENST00000635853 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
SPTAN1-228ENST00000635853 MED13LQ71F56 2210 aa6.61□□□□□ -1.35
SPTAN1-228ENST00000635853 SONP18583 2426 aaKnown RBP6.61□□□□□ -1.35
SPTAN1-228ENST00000635853 K7EQZ3 153 aa6.6□□□□□ -1.35
SPTAN1-228ENST00000635853 Q75L30 129 aa6.6□□□□□ -1.35
SPTAN1-228ENST00000635853 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
SPTAN1-228ENST00000635853 CACNA1AO00555 2505 aa6.58□□□□□ -1.36
SPTAN1-228ENST00000635853 DSCR10P59022 87 aa6.58□□□□□ -1.36
SPTAN1-228ENST00000635853 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
SPTAN1-228ENST00000635853 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
SPTAN1-228ENST00000635853 GVQW2A0A096LPI5 108 aaPredicted RBP6.56□□□□□ -1.36
SPTAN1-228ENST00000635853 MRPL34Q9BQ48 92 aaKnown RBP6.56□□□□□ -1.36
SPTAN1-228ENST00000635853 SPG11Q96JI7 2443 aa6.56□□□□□ -1.36
SPTAN1-228ENST00000635853 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
SPTAN1-228ENST00000635853 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
SPTAN1-228ENST00000635853 A8MWP4 228 aa6.54□□□□□ -1.36
SPTAN1-228ENST00000635853 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
SPTAN1-228ENST00000635853 COL27A1Q8IZC6 1860 aaPredicted RBP6.54□□□□□ -1.36
SPTAN1-228ENST00000635853 Q8NAQ8 132 aa6.54□□□□□ -1.36
SPTAN1-228ENST00000635853 Q5VV11 94 aa6.53□□□□□ -1.36
SPTAN1-228ENST00000635853 CSPG4Q6UVK1 2322 aa6.53□□□□□ -1.36
SPTAN1-228ENST00000635853 DNAH10OSP0CZ25 163 aa6.53□□□□□ -1.36
SPTAN1-228ENST00000635853 LINC00528Q8N1L1 170 aa6.51□□□□□ -1.37
SPTAN1-228ENST00000635853 M0R2T5 61 aa6.49□□□□□ -1.37
SPTAN1-228ENST00000635853 UQCR11O14957 56 aa6.48□□□□□ -1.37
SPTAN1-228ENST00000635853 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
SPTAN1-228ENST00000635853 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
SPTAN1-228ENST00000635853 PCNTO95613 3336 aa6.48□□□□□ -1.37
SPTAN1-228ENST00000635853 SORL1Q92673 2214 aa6.47□□□□□ -1.37
SPTAN1-228ENST00000635853 MYO18BQ8IUG5 2567 aa6.47□□□□□ -1.37
SPTAN1-228ENST00000635853 A0A0D9SG42 100 aa6.47□□□□□ -1.37
SPTAN1-228ENST00000635853 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.37
SPTAN1-228ENST00000635853 K7EIL1 84 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms