RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 S100A6P06703 90 aa9.55□□□□□ -0.88
SNRNP48-203ENST00000634363 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
SNRNP48-203ENST00000634363 HERV-K104P63124 156 aa9.55□□□□□ -0.88
SNRNP48-203ENST00000634363 LINC01545Q5VT33 79 aa9.55□□□□□ -0.88
SNRNP48-203ENST00000634363 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 C20orf202A1L168 122 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 UBE2BP63146 152 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 LRP2P98164 4655 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 TNXBP22105 4242 aa9.54□□□□□ -0.88
SNRNP48-203ENST00000634363 LGALS3P17931 250 aaKnown RBP9.53□□□□□ -0.88
SNRNP48-203ENST00000634363 S100A2P29034 98 aa9.53□□□□□ -0.88
SNRNP48-203ENST00000634363 LINC00158P58513 81 aa9.53□□□□□ -0.88
SNRNP48-203ENST00000634363 LINC00587B1AMM8 73 aa9.52□□□□□ -0.89
SNRNP48-203ENST00000634363 J3QQQ9 107 aa9.52□□□□□ -0.89
SNRNP48-203ENST00000634363 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
SNRNP48-203ENST00000634363 LBHQ53QV2 105 aaPredicted RBP9.52□□□□□ -0.89
SNRNP48-203ENST00000634363 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
SNRNP48-203ENST00000634363 A0A0U1RRA0 63 aa9.51□□□□□ -0.89
SNRNP48-203ENST00000634363 NMUP48645 174 aa9.51□□□□□ -0.89
SNRNP48-203ENST00000634363 TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
SNRNP48-203ENST00000634363 PSORS1C2Q9UIG4 136 aa9.51□□□□□ -0.89
SNRNP48-203ENST00000634363 C22orf24Q9Y442 160 aa9.51□□□□□ -0.89
SNRNP48-203ENST00000634363 E9PLD3 99 aa9.5□□□□□ -0.89
SNRNP48-203ENST00000634363 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
SNRNP48-203ENST00000634363 MRPL55Q7Z7F7 128 aaKnown RBP9.5□□□□□ -0.89
SNRNP48-203ENST00000634363 HIST3H2BBQ8N257 126 aa9.5□□□□□ -0.89
SNRNP48-203ENST00000634363 NKAPP1Q8N9T2 125 aa9.5□□□□□ -0.89
SNRNP48-203ENST00000634363 SMIM13P0DJ93 91 aa9.49□□□□□ -0.89
SNRNP48-203ENST00000634363 AKR1D1P51857 326 aa9.48□□□□□ -0.89
SNRNP48-203ENST00000634363 RPL24P83731 157 aaKnown RBP9.48□□□□□ -0.89
SNRNP48-203ENST00000634363 IGLV5-37A0A075B6J1 123 aa9.47□□□□□ -0.89
SNRNP48-203ENST00000634363 MIR7-3HGQ8N6C7 128 aa9.47□□□□□ -0.89
SNRNP48-203ENST00000634363 HIST1H2BLQ99880 126 aa9.47□□□□□ -0.89
SNRNP48-203ENST00000634363 RNF213Q63HN8 5207 aa9.47□□□□□ -0.89
SNRNP48-203ENST00000634363 KRTAP11-1Q8IUC1 163 aa9.46□□□□□ -0.9
SNRNP48-203ENST00000634363 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
SNRNP48-203ENST00000634363 VPREB1P12018 145 aa9.44□□□□□ -0.9
SNRNP48-203ENST00000634363 SNRPEP62304 92 aaKnown RBP9.44□□□□□ -0.9
SNRNP48-203ENST00000634363 PRR26Q8N8Z3 221 aa9.44□□□□□ -0.9
SNRNP48-203ENST00000634363 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
SNRNP48-203ENST00000634363 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
SNRNP48-203ENST00000634363 IGLV7-43P04211 117 aa9.43□□□□□ -0.9
SNRNP48-203ENST00000634363 BOD1L2Q8IYS8 172 aa9.42□□□□□ -0.9
SNRNP48-203ENST00000634363 ATOH7Q8N100 152 aa9.42□□□□□ -0.9
SNRNP48-203ENST00000634363 DIRC1Q969H9 104 aa9.42□□□□□ -0.9
SNRNP48-203ENST00000634363 MIEN1Q9BRT3 115 aa9.42□□□□□ -0.9
SNRNP48-203ENST00000634363 A0A0J9YXY3 114 aa9.41□□□□□ -0.9
SNRNP48-203ENST00000634363 ZNF815PA8K554 130 aa9.41□□□□□ -0.9
SNRNP48-203ENST00000634363 DAND5Q8N907 189 aa9.41□□□□□ -0.9
SNRNP48-203ENST00000634363 IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.9
SNRNP48-203ENST00000634363 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
SNRNP48-203ENST00000634363 C5orf52A6NGY3 159 aa9.39□□□□□ -0.91
SNRNP48-203ENST00000634363 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
SNRNP48-203ENST00000634363 Q8NDZ9 215 aa9.39□□□□□ -0.91
SNRNP48-203ENST00000634363 HSBP1L1C9JCN9 74 aa9.37□□□□□ -0.91
SNRNP48-203ENST00000634363 M0R378 163 aa9.37□□□□□ -0.91
SNRNP48-203ENST00000634363 BCE1O60756 84 aa9.37□□□□□ -0.91
SNRNP48-203ENST00000634363 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
SNRNP48-203ENST00000634363 IGLV1-50A0A075B6I6 118 aa9.36□□□□□ -0.91
SNRNP48-203ENST00000634363 H0Y9J4 135 aa9.36□□□□□ -0.91
SNRNP48-203ENST00000634363 NCR3O14931 201 aa9.36□□□□□ -0.91
SNRNP48-203ENST00000634363 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
SNRNP48-203ENST00000634363 LOC107984156A0A0G2JMH3 177 aa9.35□□□□□ -0.91
SNRNP48-203ENST00000634363 TIMM17BO60830 172 aa9.35□□□□□ -0.91
SNRNP48-203ENST00000634363 SCGB1D4Q6XE38 83 aa9.35□□□□□ -0.91
SNRNP48-203ENST00000634363 ARL17AQ8IVW1 177 aa9.35□□□□□ -0.91
SNRNP48-203ENST00000634363 ZNF861PO60384 105 aa9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 SCGB1D1O95968 90 aa9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 RPL28P46779 137 aaKnown RBP9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 NPC2P61916 151 aa9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 PRR4Q16378 134 aa9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 ADAMTSL4-AS1Q5T5F5 129 aa9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 LPAP08519 4548 aa9.34□□□□□ -0.91
SNRNP48-203ENST00000634363 UBE2AP49459 152 aa9.33□□□□□ -0.92
SNRNP48-203ENST00000634363 TMEM238C9JI98 176 aa9.32□□□□□ -0.92
SNRNP48-203ENST00000634363 S100A12P80511 92 aa9.32□□□□□ -0.92
SNRNP48-203ENST00000634363 LITAFQ99732 161 aa9.32□□□□□ -0.92
SNRNP48-203ENST00000634363 TMEM126AQ9H061 195 aa9.32□□□□□ -0.92
SNRNP48-203ENST00000634363 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
SNRNP48-203ENST00000634363 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
SNRNP48-203ENST00000634363 NDUFC2O95298 119 aa9.31□□□□□ -0.92
SNRNP48-203ENST00000634363 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
SNRNP48-203ENST00000634363 PCP2Q8IVA1 136 aa9.31□□□□□ -0.92
SNRNP48-203ENST00000634363 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
SNRNP48-203ENST00000634363 PRYO14603 147 aa9.29□□□□□ -0.92
SNRNP48-203ENST00000634363 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
SNRNP48-203ENST00000634363 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
SNRNP48-203ENST00000634363 TRBV10-3A0A0K0K1G6 114 aa9.28□□□□□ -0.92
SNRNP48-203ENST00000634363 PRLHP81277 87 aa9.28□□□□□ -0.92
SNRNP48-203ENST00000634363 S100A7L2Q5SY68 101 aa9.28□□□□□ -0.92
SNRNP48-203ENST00000634363 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
SNRNP48-203ENST00000634363 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
SNRNP48-203ENST00000634363 EIF4EBP3O60516 100 aaPredicted RBP9.27□□□□□ -0.93
SNRNP48-203ENST00000634363 DDTP30046 118 aa9.27□□□□□ -0.93
SNRNP48-203ENST00000634363 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
SNRNP48-203ENST00000634363 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
SNRNP48-203ENST00000634363 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
SNRNP48-203ENST00000634363 KRTAP13-1Q8IUC0 172 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms