RNA–Protein interactions for RNA: ENST00000633363.1

LINC01002-227, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 1 (best) BASIC

Gene LINC01002, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-227ENST00000633363 HNRNPA3P51991 378 aaKnown RBP2.78□□□□□ -1.96
LINC01002-227ENST00000633363 LINC00158P58513 81 aa2.78□□□□□ -1.96
LINC01002-227ENST00000633363 CNBPP62633 177 aaKnown RBP2.78□□□□□ -1.96
LINC01002-227ENST00000633363 C14orf177Q52M58 125 aa2.78□□□□□ -1.96
LINC01002-227ENST00000633363 SOSTDC1Q6X4U4 206 aa2.78□□□□□ -1.96
LINC01002-227ENST00000633363 SCGB1D4Q6XE38 83 aa2.78□□□□□ -1.96
LINC01002-227ENST00000633363 MIR7-3HGQ8N6C7 128 aa2.78□□□□□ -1.96
LINC01002-227ENST00000633363 IGLV5-52A0A0A0MRZ9 124 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 TRBV30A0A0K0K1B3 111 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 KRTAP29-1A8MX34 341 aaPredicted RBP2.77□□□□□ -1.97
LINC01002-227ENST00000633363 F8WDY8 70 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 TIMM17BO60830 172 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 CHTF8P0CG12 524 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 CTAG1AP78358 180 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 RPL18AQ02543 176 aaKnown RBP2.77□□□□□ -1.97
LINC01002-227ENST00000633363 GAGE2EQ4V326 116 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 Q6ZRP5 223 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 MUSTN1Q8IVN3 82 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 Q8NDZ9 215 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 XAGE1AQ9HD64 81 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 SPANXCQ9NY87 97 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 HIGD1BQ9P298 99 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 GAGE2DQ9UEU5 116 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 PKHD1P08F94 4074 aa2.77□□□□□ -1.97
LINC01002-227ENST00000633363 A0A096LNI7 61 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 IGKV2-24A0A0C4DH68 120 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 LOC107984640A0A0U1RRK4 108 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 A0A1B0GVY2 172 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 NDUFC2-KCTD14E9PQ53 114 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 PANO1I0J062 215 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 DDTP30046 118 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 HINT1P49773 126 aaPredicted RBP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 FXYD2P54710 66 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 GAGE2BQ13066 116 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 SRSF9Q13242 221 aaKnown RBP eCLIP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 CIRBPQ14011 172 aaKnown RBP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 RNF151Q2KHN1 245 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 SFTA2Q6UW10 78 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 SDIM1Q6ZPB5 146 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 C9orf163Q8N9P6 203 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 LINC00308Q8TCZ7 52 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 HIST1H4GQ99525 98 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 SND1-IT1Q9HBX3 110 aa2.76□□□□□ -1.97
LINC01002-227ENST00000633363 SPANXB1Q9NS25 103 aaPredicted RBP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
LINC01002-227ENST00000633363 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 FAM168BA1KXE4 195 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 LINC00587B1AMM8 73 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 TLX1NBP0CAT3 122 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 GCSHP23434 173 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 PTTG1IPP53801 180 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 PRR3P79522 188 aaKnown RBP2.75□□□□□ -1.97
LINC01002-227ENST00000633363 HSD52Q0P140 79 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 COX17Q14061 63 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 SERTAD4-AS1Q5TG53 156 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 LINC00336Q6ZUF6 198 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 KRTAP7-1Q8IUC3 87 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 CEND1Q8N111 149 aa2.75□□□□□ -1.97
LINC01002-227ENST00000633363 A0A1W2PNN7 141 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 A4D1N5 150 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 C16orf90A8MZG2 172 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 VPREB1P12018 145 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 HAMPP81172 84 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 BATFQ16520 125 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 TAL2Q16559 108 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 BVES-AS1Q5T3Y7 98 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 FAM19A5Q7Z5A7 132 aaPredicted RBP2.74□□□□□ -1.97
LINC01002-227ENST00000633363 Q8N1X5 172 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 FAM30AQ9NZY2 134 aa2.74□□□□□ -1.97
LINC01002-227ENST00000633363 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
LINC01002-227ENST00000633363 IGKV2-28A0A075B6P5 120 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 LOC107984156A0A0G2JMH3 177 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 K7ERJ3 54 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 NCR3O14931 201 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 IGKV2D-28P01615 120 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 CFC1BP0CG36 223 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 CFC1P0CG37 223 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 IFITM1P13164 125 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 Q6ZVH6 145 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 ARL17AQ8IVW1 177 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 SNHG12Q9BXW3 62 aa2.73□□□□□ -1.97
LINC01002-227ENST00000633363 NHP2Q9NX24 153 aaKnown RBP2.73□□□□□ -1.97
LINC01002-227ENST00000633363 A0A087WYN8 130 aa2.72□□□□□ -1.97
LINC01002-227ENST00000633363 GAGE10A6NGK3 116 aa2.72□□□□□ -1.97
LINC01002-227ENST00000633363 APOBP04114 4563 aaKnown RBP2.72□□□□□ -1.97
LINC01002-227ENST00000633363 RPL24P83731 157 aaKnown RBP2.72□□□□□ -1.97
LINC01002-227ENST00000633363 PHF5AQ7RTV0 110 aaKnown RBP2.72□□□□□ -1.97
LINC01002-227ENST00000633363 KRTAP11-1Q8IUC1 163 aa2.72□□□□□ -1.97
LINC01002-227ENST00000633363 LINC00337Q8N6G1 96 aa2.72□□□□□ -1.97
LINC01002-227ENST00000633363 SPACA4Q8TDM5 124 aa2.72□□□□□ -1.97
LINC01002-227ENST00000633363 IGLV5-37A0A075B6J1 123 aa2.71□□□□□ -1.98
LINC01002-227ENST00000633363 TRBV10-3A0A0K0K1G6 114 aa2.71□□□□□ -1.98
LINC01002-227ENST00000633363 H7C2G1 150 aa2.71□□□□□ -1.98
LINC01002-227ENST00000633363 M0QXV9 152 aa2.71□□□□□ -1.98
LINC01002-227ENST00000633363 M0R143 59 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms