RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 C11orf72Q8NBR9 251 aa8.15□□□□□ -1.1
SHPRH-211ENST00000629427 CXCL6P80162 114 aa8.15□□□□□ -1.1
SHPRH-211ENST00000629427 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
SHPRH-211ENST00000629427 TMEM254Q8TBM7 123 aa8.15□□□□□ -1.11
SHPRH-211ENST00000629427 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
SHPRH-211ENST00000629427 COL4A2P08572 1712 aa8.14□□□□□ -1.11
SHPRH-211ENST00000629427 USP9XQ93008 2570 aaPredicted RBP8.14□□□□□ -1.11
SHPRH-211ENST00000629427 A0A096LNJ9 63 aa8.14□□□□□ -1.11
SHPRH-211ENST00000629427 RTL8CO15255 209 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 ANKRD11Q6UB99 2663 aaPredicted RBP8.13□□□□□ -1.11
SHPRH-211ENST00000629427 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
SHPRH-211ENST00000629427 LINC00313P59037 77 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 C10orf142B7Z368 130 aa8.13□□□□□ -1.11
SHPRH-211ENST00000629427 LINC00315P59091 139 aa8.12□□□□□ -1.11
SHPRH-211ENST00000629427 ACYP2P14621 99 aa8.12□□□□□ -1.11
SHPRH-211ENST00000629427 KIF25-AS1Q9Y6Z4 181 aa8.12□□□□□ -1.11
SHPRH-211ENST00000629427 SPATA3Q8NHX4 192 aa8.11□□□□□ -1.11
SHPRH-211ENST00000629427 F8P00451 2351 aa8.11□□□□□ -1.11
SHPRH-211ENST00000629427 ACANP16112 2415 aa8.11□□□□□ -1.11
SHPRH-211ENST00000629427 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
SHPRH-211ENST00000629427 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
SHPRH-211ENST00000629427 ZNF462Q96JM2 2506 aa8.1□□□□□ -1.11
SHPRH-211ENST00000629427 Q6ZRP5 223 aa8.09□□□□□ -1.11
SHPRH-211ENST00000629427 KRTAP24-1Q3LI83 254 aa8.09□□□□□ -1.11
SHPRH-211ENST00000629427 SPTBN4Q9H254 2564 aa8.09□□□□□ -1.12
SHPRH-211ENST00000629427 PKD1L2Q7Z442 2459 aa8.08□□□□□ -1.12
SHPRH-211ENST00000629427 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 J3QL48 77 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 H3BNG1 76 aa8.07□□□□□ -1.12
SHPRH-211ENST00000629427 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 Q96NJ1 140 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 LINC00476Q8WZB0 136 aa8.06□□□□□ -1.12
SHPRH-211ENST00000629427 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
SHPRH-211ENST00000629427 FAM19A4Q96LR4 140 aa8.04□□□□□ -1.12
SHPRH-211ENST00000629427 LINC00588Q9Y4M8 146 aa8.04□□□□□ -1.12
SHPRH-211ENST00000629427 Q8NBF4 154 aa8.04□□□□□ -1.12
SHPRH-211ENST00000629427 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
SHPRH-211ENST00000629427 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
SHPRH-211ENST00000629427 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
SHPRH-211ENST00000629427 Q6ZRX8 168 aa8.02□□□□□ -1.13
SHPRH-211ENST00000629427 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
SHPRH-211ENST00000629427 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
SHPRH-211ENST00000629427 ST20-AS1Q8NBB2 130 aa8.01□□□□□ -1.13
SHPRH-211ENST00000629427 Q8NAQ8 132 aa8□□□□□ -1.13
SHPRH-211ENST00000629427 DNAH12Q6ZR08 3092 aa8□□□□□ -1.13
SHPRH-211ENST00000629427 BCE1O60756 84 aa8□□□□□ -1.13
SHPRH-211ENST00000629427 USP9YO00507 2555 aaPredicted RBP7.99□□□□□ -1.13
SHPRH-211ENST00000629427 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
SHPRH-211ENST00000629427 BPTFQ12830 3046 aa7.98□□□□□ -1.13
SHPRH-211ENST00000629427 FAM168BA1KXE4 195 aa7.97□□□□□ -1.13
SHPRH-211ENST00000629427 Q6ZQT0 140 aa7.97□□□□□ -1.13
SHPRH-211ENST00000629427 TRAV22A0A0B4J277 110 aa7.96□□□□□ -1.13
SHPRH-211ENST00000629427 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.14
SHPRH-211ENST00000629427 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
SHPRH-211ENST00000629427 GVQW2A0A096LPI5 108 aaPredicted RBP7.95□□□□□ -1.14
SHPRH-211ENST00000629427 A0A1B0GW54 56 aa7.95□□□□□ -1.14
SHPRH-211ENST00000629427 CDIP1Q9H305 208 aa7.95□□□□□ -1.14
SHPRH-211ENST00000629427 MTORP42345 2549 aa7.94□□□□□ -1.14
SHPRH-211ENST00000629427 DNAH10OSP0CZ25 163 aa7.94□□□□□ -1.14
SHPRH-211ENST00000629427 POLQO75417 2590 aa7.93□□□□□ -1.14
SHPRH-211ENST00000629427 LOC110117498A0A087WWA1 95 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 H3BPC8 53 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 CHD8Q9HCK8 2581 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 UTRNP46939 3433 aa7.91□□□□□ -1.14
SHPRH-211ENST00000629427 FASNP49327 2511 aaKnown RBP7.9□□□□□ -1.14
SHPRH-211ENST00000629427 TM2D3Q9BRN9 247 aa7.89□□□□□ -1.15
SHPRH-211ENST00000629427 TRBV7-4A0A0J9YYF1 115 aa7.88□□□□□ -1.15
SHPRH-211ENST00000629427 A8MWP4 228 aa7.88□□□□□ -1.15
SHPRH-211ENST00000629427 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
SHPRH-211ENST00000629427 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
SHPRH-211ENST00000629427 SERTAD4-AS1Q5TG53 156 aa7.87□□□□□ -1.15
SHPRH-211ENST00000629427 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
SHPRH-211ENST00000629427 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
SHPRH-211ENST00000629427 KRTAP10-11P60412 298 aa7.86□□□□□ -1.15
SHPRH-211ENST00000629427 C4orf26Q17RF5 130 aa7.86□□□□□ -1.15
SHPRH-211ENST00000629427 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
SHPRH-211ENST00000629427 VPREB1P12018 145 aa7.85□□□□□ -1.15
SHPRH-211ENST00000629427 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
SHPRH-211ENST00000629427 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
SHPRH-211ENST00000629427 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 K7EQZ3 153 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 DSCR10P59022 87 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 K7EIL1 84 aa7.84□□□□□ -1.15
SHPRH-211ENST00000629427 APLNQ9ULZ1 77 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 CR1P17927 2039 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 OBSCN-AS1Q96MR7 158 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 USP24Q9UPU5 2620 aa7.83□□□□□ -1.16
SHPRH-211ENST00000629427 CEP295Q9C0D2 2601 aa7.82□□□□□ -1.16
SHPRH-211ENST00000629427 IGLV1-50A0A075B6I6 118 aa7.82□□□□□ -1.16
SHPRH-211ENST00000629427 LINC01600Q96MT4 127 aa7.81□□□□□ -1.16
SHPRH-211ENST00000629427 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
SHPRH-211ENST00000629427 C5orf42Q9H799 3197 aa7.81□□□□□ -1.16
SHPRH-211ENST00000629427 CSNK1G2-AS1Q8NCQ2 148 aa7.8□□□□□ -1.16
SHPRH-211ENST00000629427 PRRC2CQ9Y520 2896 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms