RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
SYNGAP1-207ENST00000628646 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
SYNGAP1-207ENST00000628646 SCGB1A1P11684 91 aa8.47□□□□□ -1.05
SYNGAP1-207ENST00000628646 C14orf177Q52M58 125 aa8.47□□□□□ -1.05
SYNGAP1-207ENST00000628646 ANAPC13Q9BS18 74 aa8.47□□□□□ -1.05
SYNGAP1-207ENST00000628646 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
SYNGAP1-207ENST00000628646 COX17Q14061 63 aa8.46□□□□□ -1.05
SYNGAP1-207ENST00000628646 M0QXV9 152 aa8.46□□□□□ -1.06
SYNGAP1-207ENST00000628646 BAALC-AS2P0C853 105 aa8.46□□□□□ -1.06
SYNGAP1-207ENST00000628646 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
SYNGAP1-207ENST00000628646 TRACP01848 142 aa8.45□□□□□ -1.06
SYNGAP1-207ENST00000628646 CLEC2BQ92478 149 aa8.44□□□□□ -1.06
SYNGAP1-207ENST00000628646 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
SYNGAP1-207ENST00000628646 SOSTDC1Q6X4U4 206 aa8.44□□□□□ -1.06
SYNGAP1-207ENST00000628646 C6orf223Q8N319 242 aa8.44□□□□□ -1.06
SYNGAP1-207ENST00000628646 LST1O00453 97 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 ACYP1P07311 99 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 GAGE2EQ4V326 116 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 GAGE2DQ9UEU5 116 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 LINC00476Q8WZB0 136 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 GAGE2BQ13066 116 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
SYNGAP1-207ENST00000628646 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
SYNGAP1-207ENST00000628646 H3BQ85 93 aa8.41□□□□□ -1.06
SYNGAP1-207ENST00000628646 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
SYNGAP1-207ENST00000628646 ORMDL1Q9P0S3 153 aa8.41□□□□□ -1.06
SYNGAP1-207ENST00000628646 FBN3Q75N90 2809 aa8.39□□□□□ -1.07
SYNGAP1-207ENST00000628646 SYCNQ0VAF6 134 aa8.39□□□□□ -1.07
SYNGAP1-207ENST00000628646 DNAH3Q8TD57 4116 aa8.39□□□□□ -1.07
SYNGAP1-207ENST00000628646 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
SYNGAP1-207ENST00000628646 NKAPP1Q8N9T2 125 aa8.38□□□□□ -1.07
SYNGAP1-207ENST00000628646 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
SYNGAP1-207ENST00000628646 LAMTOR3Q9UHA4 124 aa8.37□□□□□ -1.07
SYNGAP1-207ENST00000628646 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
SYNGAP1-207ENST00000628646 A0A1B0GX51 115 aa8.36□□□□□ -1.07
SYNGAP1-207ENST00000628646 NDUFC2O95298 119 aa8.36□□□□□ -1.07
SYNGAP1-207ENST00000628646 GAGE2AQ6NT46 116 aa8.36□□□□□ -1.07
SYNGAP1-207ENST00000628646 F8WDY8 70 aa8.36□□□□□ -1.07
SYNGAP1-207ENST00000628646 IGLV5-52A0A0A0MRZ9 124 aa8.34□□□□□ -1.07
SYNGAP1-207ENST00000628646 XGP55808 180 aa8.34□□□□□ -1.07
SYNGAP1-207ENST00000628646 SMIM11BQ8TCY0 68 aa8.34□□□□□ -1.07
SYNGAP1-207ENST00000628646 JMJD7-PLA2G4BH0Y9G9 81 aa8.34□□□□□ -1.07
SYNGAP1-207ENST00000628646 PKIGQ9Y2B9 76 aa8.34□□□□□ -1.07
SYNGAP1-207ENST00000628646 NCR3O14931 201 aa8.34□□□□□ -1.07
SYNGAP1-207ENST00000628646 TMEM256-PLSCR3K7ERE1 68 aa8.33□□□□□ -1.08
SYNGAP1-207ENST00000628646 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
SYNGAP1-207ENST00000628646 UBE2BP63146 152 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 UNQ6190/PRO20217Q6UXQ8 127 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 MT-ATP8P03928 68 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 IGKV2-28A0A075B6P5 120 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 IGKV2D-28P01615 120 aa8.32□□□□□ -1.08
SYNGAP1-207ENST00000628646 XAGE1AQ9HD64 81 aa8.31□□□□□ -1.08
SYNGAP1-207ENST00000628646 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
SYNGAP1-207ENST00000628646 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
SYNGAP1-207ENST00000628646 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
SYNGAP1-207ENST00000628646 MEGF8Q7Z7M0 2845 aa8.3□□□□□ -1.08
SYNGAP1-207ENST00000628646 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
SYNGAP1-207ENST00000628646 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
SYNGAP1-207ENST00000628646 PRR34Q9NV39 138 aa8.29□□□□□ -1.08
SYNGAP1-207ENST00000628646 LCE6AA0A183 80 aa8.28□□□□□ -1.08
SYNGAP1-207ENST00000628646 C9orf116Q5BN46 136 aaPredicted RBP8.28□□□□□ -1.08
SYNGAP1-207ENST00000628646 C6orf99Q4VX62 202 aa8.28□□□□□ -1.08
SYNGAP1-207ENST00000628646 hADV29S1A0JD25 119 aa8.28□□□□□ -1.08
SYNGAP1-207ENST00000628646 COX7BP24311 80 aa8.28□□□□□ -1.08
SYNGAP1-207ENST00000628646 DSCR8Q96T75 97 aa8.28□□□□□ -1.08
SYNGAP1-207ENST00000628646 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
SYNGAP1-207ENST00000628646 M0R378 163 aa8.27□□□□□ -1.09
SYNGAP1-207ENST00000628646 DNAH1Q9P2D7 4330 aa8.26□□□□□ -1.09
SYNGAP1-207ENST00000628646 PDE6GP18545 87 aa8.26□□□□□ -1.09
SYNGAP1-207ENST00000628646 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
SYNGAP1-207ENST00000628646 Q6ZRU5 148 aa8.26□□□□□ -1.09
SYNGAP1-207ENST00000628646 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
SYNGAP1-207ENST00000628646 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
SYNGAP1-207ENST00000628646 LINC00643Q86TS7 51 aa8.25□□□□□ -1.09
SYNGAP1-207ENST00000628646 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
SYNGAP1-207ENST00000628646 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
SYNGAP1-207ENST00000628646 TRAV23DV6A0A075B6W5 121 aa8.24□□□□□ -1.09
SYNGAP1-207ENST00000628646 C16orf90A8MZG2 172 aa8.24□□□□□ -1.09
SYNGAP1-207ENST00000628646 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
SYNGAP1-207ENST00000628646 KIAA0087Q14695 138 aa8.24□□□□□ -1.09
SYNGAP1-207ENST00000628646 ETDCA0A1B0GVM5 59 aa8.23□□□□□ -1.09
SYNGAP1-207ENST00000628646 A0A087WTM6 91 aa8.23□□□□□ -1.09
SYNGAP1-207ENST00000628646 RBM3P98179 157 aaKnown RBP8.23□□□□□ -1.09
SYNGAP1-207ENST00000628646 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
SYNGAP1-207ENST00000628646 TNP2Q05952 138 aa8.23□□□□□ -1.09
SYNGAP1-207ENST00000628646 RTL8CO15255 209 aa8.22□□□□□ -1.09
SYNGAP1-207ENST00000628646 Q8N814 137 aa8.2□□□□□ -1.1
SYNGAP1-207ENST00000628646 C14orf132Q9NPU4 83 aa8.2□□□□□ -1.1
SYNGAP1-207ENST00000628646 SLPIP03973 132 aa8.2□□□□□ -1.1
SYNGAP1-207ENST00000628646 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
SYNGAP1-207ENST00000628646 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
SYNGAP1-207ENST00000628646 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
SYNGAP1-207ENST00000628646 F8WEM9 126 aa8.19□□□□□ -1.1
SYNGAP1-207ENST00000628646 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
SYNGAP1-207ENST00000628646 A0A087WYN8 130 aa8.19□□□□□ -1.1
SYNGAP1-207ENST00000628646 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
SYNGAP1-207ENST00000628646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms