RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 A0A087X002 238 aa10.18□□□□□ -0.78
SPTAN1-214ENST00000628614 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
SPTAN1-214ENST00000628614 LEPROTL1O95214 131 aa10.17□□□□□ -0.78
SPTAN1-214ENST00000628614 HERV-K104P63124 156 aa10.17□□□□□ -0.78
SPTAN1-214ENST00000628614 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
SPTAN1-214ENST00000628614 Q8NDZ9 215 aa10.17□□□□□ -0.78
SPTAN1-214ENST00000628614 A0A0U1RRA0 63 aa10.16□□□□□ -0.78
SPTAN1-214ENST00000628614 H0Y8G0 127 aa10.16□□□□□ -0.78
SPTAN1-214ENST00000628614 ATP6V1G1O75348 118 aa10.16□□□□□ -0.78
SPTAN1-214ENST00000628614 SERF1AO75920 110 aa10.16□□□□□ -0.78
SPTAN1-214ENST00000628614 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
SPTAN1-214ENST00000628614 TYMSOSQ8TAI1 123 aa10.16□□□□□ -0.78
SPTAN1-214ENST00000628614 LINC00587B1AMM8 73 aa10.15□□□□□ -0.78
SPTAN1-214ENST00000628614 M0R378 163 aa10.15□□□□□ -0.78
SPTAN1-214ENST00000628614 SMIM13P0DJ93 91 aa10.15□□□□□ -0.78
SPTAN1-214ENST00000628614 PRLHP81277 87 aa10.15□□□□□ -0.78
SPTAN1-214ENST00000628614 LINC00310P59036 64 aa10.14□□□□□ -0.79
SPTAN1-214ENST00000628614 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
SPTAN1-214ENST00000628614 SLC7A5P1Q8MH63 180 aa10.14□□□□□ -0.79
SPTAN1-214ENST00000628614 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
SPTAN1-214ENST00000628614 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
SPTAN1-214ENST00000628614 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
SPTAN1-214ENST00000628614 PLNP26678 52 aa10.13□□□□□ -0.79
SPTAN1-214ENST00000628614 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
SPTAN1-214ENST00000628614 PRR4Q16378 134 aa10.12□□□□□ -0.79
SPTAN1-214ENST00000628614 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
SPTAN1-214ENST00000628614 BOD1L2Q8IYS8 172 aa10.11□□□□□ -0.79
SPTAN1-214ENST00000628614 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
SPTAN1-214ENST00000628614 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
SPTAN1-214ENST00000628614 COLCA2A8K830 154 aa10.1□□□□□ -0.79
SPTAN1-214ENST00000628614 TSPAN13O95857 204 aa10.1□□□□□ -0.79
SPTAN1-214ENST00000628614 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
SPTAN1-214ENST00000628614 PLEKHB2Q96CS7 222 aa10.1□□□□□ -0.79
SPTAN1-214ENST00000628614 LEPROTO15243 131 aa10.09□□□□□ -0.79
SPTAN1-214ENST00000628614 DPM2O94777 84 aa10.09□□□□□ -0.79
SPTAN1-214ENST00000628614 FABP4P15090 132 aa10.09□□□□□ -0.79
SPTAN1-214ENST00000628614 HERVK_113P61574 105 aa10.09□□□□□ -0.79
SPTAN1-214ENST00000628614 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
SPTAN1-214ENST00000628614 PRYO14603 147 aa10.08□□□□□ -0.8
SPTAN1-214ENST00000628614 NCR3O14931 201 aa10.07□□□□□ -0.8
SPTAN1-214ENST00000628614 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
SPTAN1-214ENST00000628614 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
SPTAN1-214ENST00000628614 J3QQQ9 107 aa10.06□□□□□ -0.8
SPTAN1-214ENST00000628614 IGKCP01834 107 aa10.06□□□□□ -0.8
SPTAN1-214ENST00000628614 NMUP48645 174 aa10.05□□□□□ -0.8
SPTAN1-214ENST00000628614 LINC00304Q8N9R0 145 aa10.05□□□□□ -0.8
SPTAN1-214ENST00000628614 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
SPTAN1-214ENST00000628614 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
SPTAN1-214ENST00000628614 KCNQ1DNQ9H478 68 aa10.04□□□□□ -0.8
SPTAN1-214ENST00000628614 LGALS3P17931 250 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-214ENST00000628614 S100A12P80511 92 aa10.03□□□□□ -0.8
SPTAN1-214ENST00000628614 ZNF706Q9Y5V0 76 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-214ENST00000628614 LOC107984156A0A0G2JMH3 177 aa10.02□□□□□ -0.81
SPTAN1-214ENST00000628614 SPRR1AP35321 89 aa10.02□□□□□ -0.81
SPTAN1-214ENST00000628614 ARL17AQ8IVW1 177 aa10.02□□□□□ -0.81
SPTAN1-214ENST00000628614 DAND5Q8N907 189 aa10.02□□□□□ -0.81
SPTAN1-214ENST00000628614 TRBV10-3A0A0K0K1G6 114 aa10.01□□□□□ -0.81
SPTAN1-214ENST00000628614 ETDCA0A1B0GVM5 59 aa10.01□□□□□ -0.81
SPTAN1-214ENST00000628614 SPRR4Q96PI1 79 aa10.01□□□□□ -0.81
SPTAN1-214ENST00000628614 MIEN1Q9BRT3 115 aa10.01□□□□□ -0.81
SPTAN1-214ENST00000628614 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
SPTAN1-214ENST00000628614 CTAG1AP78358 180 aa10□□□□□ -0.81
SPTAN1-214ENST00000628614 KRTAP4-16G5E9R7 235 aaPredicted RBP9.99□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BKO60814 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BJP06899 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BOP23527 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BBP33778 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BDP58876 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BCP62807 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST2H2BEQ16778 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BHQ93079 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BNQ99877 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 HIST1H2BMQ99879 126 aa9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
SPTAN1-214ENST00000628614 E9PLD3 99 aa9.97□□□□□ -0.81
SPTAN1-214ENST00000628614 DDTP30046 118 aa9.97□□□□□ -0.81
SPTAN1-214ENST00000628614 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
SPTAN1-214ENST00000628614 NDUFC2O95298 119 aa9.95□□□□□ -0.82
SPTAN1-214ENST00000628614 SMCR5Q8TEV8 140 aa9.95□□□□□ -0.82
SPTAN1-214ENST00000628614 A0A0J9YXY3 114 aa9.94□□□□□ -0.82
SPTAN1-214ENST00000628614 SPAG11AQ6PDA7 123 aa9.94□□□□□ -0.82
SPTAN1-214ENST00000628614 RETNLBQ9BQ08 111 aa9.94□□□□□ -0.82
SPTAN1-214ENST00000628614 B5MCH6 92 aa9.93□□□□□ -0.82
SPTAN1-214ENST00000628614 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
SPTAN1-214ENST00000628614 IGLV6-57P01721 117 aa9.91□□□□□ -0.82
SPTAN1-214ENST00000628614 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
SPTAN1-214ENST00000628614 PET117Q6UWS5 81 aa9.91□□□□□ -0.82
SPTAN1-214ENST00000628614 NPC2P61916 151 aa9.9□□□□□ -0.82
SPTAN1-214ENST00000628614 LINC00483Q53H64 154 aa9.9□□□□□ -0.82
SPTAN1-214ENST00000628614 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
SPTAN1-214ENST00000628614 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
SPTAN1-214ENST00000628614 Q6ZRX8 168 aa9.9□□□□□ -0.82
SPTAN1-214ENST00000628614 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
SPTAN1-214ENST00000628614 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
SPTAN1-214ENST00000628614 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
SPTAN1-214ENST00000628614 GAGE2AQ6NT46 116 aa9.88□□□□□ -0.83
SPTAN1-214ENST00000628614 Q9BRP9 147 aa9.88□□□□□ -0.83
SPTAN1-214ENST00000628614 JOSD1Q15040 202 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms