RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 ERG28Q9UKR5 140 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 SCO1O75880 301 aa7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 HBDP02042 147 aa7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 LINC00614P0C842 121 aa7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 SFTA2Q6UW10 78 aa7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 COMMD7Q86VX2 200 aa7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
SOX2-OT-247ENST00000628347 NDUFA6P56556 154 aa7.26□□□□□ -1.25
SOX2-OT-247ENST00000628347 TMEM126AQ9H061 195 aa7.26□□□□□ -1.25
SOX2-OT-247ENST00000628347 RPS10P5Q9NQ39 176 aa7.26□□□□□ -1.25
SOX2-OT-247ENST00000628347 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
SOX2-OT-247ENST00000628347 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
SOX2-OT-247ENST00000628347 TRAPPC1Q9Y5R8 145 aa7.25□□□□□ -1.25
SOX2-OT-247ENST00000628347 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
SOX2-OT-247ENST00000628347 C11orf86A6NJI1 115 aa7.24□□□□□ -1.25
SOX2-OT-247ENST00000628347 M0R378 163 aa7.24□□□□□ -1.25
SOX2-OT-247ENST00000628347 PRLHP81277 87 aa7.24□□□□□ -1.25
SOX2-OT-247ENST00000628347 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
SOX2-OT-247ENST00000628347 ZNF625Q96I27 306 aaPredicted RBP7.24□□□□□ -1.25
SOX2-OT-247ENST00000628347 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
SOX2-OT-247ENST00000628347 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
SOX2-OT-247ENST00000628347 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
SOX2-OT-247ENST00000628347 Q8NDZ9 215 aa7.23□□□□□ -1.25
SOX2-OT-247ENST00000628347 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
SOX2-OT-247ENST00000628347 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
SOX2-OT-247ENST00000628347 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
SOX2-OT-247ENST00000628347 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
SOX2-OT-247ENST00000628347 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
SOX2-OT-247ENST00000628347 CBLN2Q8IUK8 224 aa7.2□□□□□ -1.26
SOX2-OT-247ENST00000628347 CHTOPQ9Y3Y2 248 aaKnown RBP7.2□□□□□ -1.26
SOX2-OT-247ENST00000628347 TRAV12-1A0A0B4J245 112 aa7.19□□□□□ -1.26
SOX2-OT-247ENST00000628347 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
SOX2-OT-247ENST00000628347 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
SOX2-OT-247ENST00000628347 LINC00158P58513 81 aa7.18□□□□□ -1.26
SOX2-OT-247ENST00000628347 C3orf22Q8N5N4 141 aa7.18□□□□□ -1.26
SOX2-OT-247ENST00000628347 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-247ENST00000628347 SPRR4Q96PI1 79 aa7.17□□□□□ -1.26
SOX2-OT-247ENST00000628347 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 PRYO14603 147 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 SNAPINO95295 136 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 APOC3P02656 99 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 SPAG11AQ6PDA7 123 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
SOX2-OT-247ENST00000628347 SPRR1AP35321 89 aa7.15□□□□□ -1.26
SOX2-OT-247ENST00000628347 SVBPQ8N300 66 aa7.15□□□□□ -1.26
SOX2-OT-247ENST00000628347 LINC00337Q8N6G1 96 aa7.15□□□□□ -1.26
SOX2-OT-247ENST00000628347 YPEL4Q96NS1 127 aa7.15□□□□□ -1.26
SOX2-OT-247ENST00000628347 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-247ENST00000628347 A0A0U1RRA0 63 aa7.14□□□□□ -1.27
SOX2-OT-247ENST00000628347 SMIM13P0DJ93 91 aa7.14□□□□□ -1.27
SOX2-OT-247ENST00000628347 HERV-K104P63124 156 aa7.14□□□□□ -1.27
SOX2-OT-247ENST00000628347 CDIP1Q9H305 208 aa7.14□□□□□ -1.27
SOX2-OT-247ENST00000628347 LINC00587B1AMM8 73 aa7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 NDUFA5Q16718 116 aa7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 BOD1L2Q8IYS8 172 aa7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
SOX2-OT-247ENST00000628347 ATP6V1G1O75348 118 aa7.12□□□□□ -1.27
SOX2-OT-247ENST00000628347 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
SOX2-OT-247ENST00000628347 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
SOX2-OT-247ENST00000628347 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
SOX2-OT-247ENST00000628347 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 NCR3O14931 201 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 MAP1LC3CQ9BXW4 147 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
SOX2-OT-247ENST00000628347 TRBV10-3A0A0K0K1G6 114 aa7.09□□□□□ -1.27
SOX2-OT-247ENST00000628347 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
SOX2-OT-247ENST00000628347 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
SOX2-OT-247ENST00000628347 HSBP1O75506 76 aa7.08□□□□□ -1.28
SOX2-OT-247ENST00000628347 FAM19A2Q8N3H0 131 aa7.08□□□□□ -1.28
SOX2-OT-247ENST00000628347 Q8NBF4 154 aa7.08□□□□□ -1.28
SOX2-OT-247ENST00000628347 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
SOX2-OT-247ENST00000628347 S100A12P80511 92 aa7.07□□□□□ -1.28
SOX2-OT-247ENST00000628347 B5MCH6 92 aa7.06□□□□□ -1.28
SOX2-OT-247ENST00000628347 LEPROTO15243 131 aa7.06□□□□□ -1.28
SOX2-OT-247ENST00000628347 SPINK1P00995 79 aa7.06□□□□□ -1.28
SOX2-OT-247ENST00000628347 TSPEAR-AS2P59090 65 aa7.06□□□□□ -1.28
SOX2-OT-247ENST00000628347 DAND5Q8N907 189 aa7.06□□□□□ -1.28
SOX2-OT-247ENST00000628347 LEPROTL1O95214 131 aa7.05□□□□□ -1.28
SOX2-OT-247ENST00000628347 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
SOX2-OT-247ENST00000628347 PLNP26678 52 aa7.04□□□□□ -1.28
SOX2-OT-247ENST00000628347 DDTP30046 118 aa7.04□□□□□ -1.28
SOX2-OT-247ENST00000628347 NMUP48645 174 aa7.04□□□□□ -1.28
SOX2-OT-247ENST00000628347 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
SOX2-OT-247ENST00000628347 H0Y8G0 127 aa7.03□□□□□ -1.28
SOX2-OT-247ENST00000628347 LINC00310P59036 64 aa7.03□□□□□ -1.28
SOX2-OT-247ENST00000628347 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
SOX2-OT-247ENST00000628347 SPANXB1Q9NS25 103 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-247ENST00000628347 J3QQQ9 107 aa7.02□□□□□ -1.29
SOX2-OT-247ENST00000628347 ERC2-IT1O76042 136 aa7.02□□□□□ -1.29
SOX2-OT-247ENST00000628347 NDUFC2O95298 119 aa7.02□□□□□ -1.29
SOX2-OT-247ENST00000628347 TRGC2P03986 189 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms