RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 M0QXV9 152 aa11.8□□□□□ -0.52
MECP2-216ENST00000627864 TIMM17BO60830 172 aa11.8□□□□□ -0.52
MECP2-216ENST00000627864 SPATA45Q537H7 98 aa11.8□□□□□ -0.52
MECP2-216ENST00000627864 KRTAP17-1Q9BYP8 105 aa11.8□□□□□ -0.52
MECP2-216ENST00000627864 Q8N1X5 172 aa11.79□□□□□ -0.52
MECP2-216ENST00000627864 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
MECP2-216ENST00000627864 C22orf24Q9Y442 160 aa11.79□□□□□ -0.52
MECP2-216ENST00000627864 FAM229AH3BQW9 127 aa11.78□□□□□ -0.52
MECP2-216ENST00000627864 LITAFQ99732 161 aa11.78□□□□□ -0.52
MECP2-216ENST00000627864 RYR1P21817 5038 aa11.78□□□□□ -0.52
MECP2-216ENST00000627864 NPC2P61916 151 aa11.77□□□□□ -0.53
MECP2-216ENST00000627864 RPL24P83731 157 aaKnown RBP11.77□□□□□ -0.53
MECP2-216ENST00000627864 BOD1L2Q8IYS8 172 aa11.77□□□□□ -0.53
MECP2-216ENST00000627864 NKAPP1Q8N9T2 125 aa11.77□□□□□ -0.53
MECP2-216ENST00000627864 COX8AP10176 69 aa11.76□□□□□ -0.53
MECP2-216ENST00000627864 VPREB1P12018 145 aa11.76□□□□□ -0.53
MECP2-216ENST00000627864 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
MECP2-216ENST00000627864 IGLV5-37A0A075B6J1 123 aa11.75□□□□□ -0.53
MECP2-216ENST00000627864 TMEM238C9JI98 176 aa11.75□□□□□ -0.53
MECP2-216ENST00000627864 Q5VSD8 79 aa11.75□□□□□ -0.53
MECP2-216ENST00000627864 Q8NDZ9 215 aa11.75□□□□□ -0.53
MECP2-216ENST00000627864 C14orf144Q96I85 54 aa11.75□□□□□ -0.53
MECP2-216ENST00000627864 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
MECP2-216ENST00000627864 LBHQ53QV2 105 aaPredicted RBP11.74□□□□□ -0.53
MECP2-216ENST00000627864 MRPL55Q7Z7F7 128 aaKnown RBP11.74□□□□□ -0.53
MECP2-216ENST00000627864 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
MECP2-216ENST00000627864 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
MECP2-216ENST00000627864 RPL37AP61513 92 aaKnown RBP11.73□□□□□ -0.53
MECP2-216ENST00000627864 UBE2BP63146 152 aa11.73□□□□□ -0.53
MECP2-216ENST00000627864 SOSTDC1Q6X4U4 206 aa11.73□□□□□ -0.53
MECP2-216ENST00000627864 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
MECP2-216ENST00000627864 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
MECP2-216ENST00000627864 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
MECP2-216ENST00000627864 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
MECP2-216ENST00000627864 LINC00308Q8TCZ7 52 aa11.72□□□□□ -0.53
MECP2-216ENST00000627864 LINC00167Q96N53 147 aa11.72□□□□□ -0.53
MECP2-216ENST00000627864 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
MECP2-216ENST00000627864 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
MECP2-216ENST00000627864 HSPG2P98160 4391 aa11.71□□□□□ -0.53
MECP2-216ENST00000627864 LOC105371267A0A1B0GV96 52 aa11.71□□□□□ -0.53
MECP2-216ENST00000627864 DLEU1O43261 78 aa11.7□□□□□ -0.54
MECP2-216ENST00000627864 S100A12P80511 92 aa11.7□□□□□ -0.54
MECP2-216ENST00000627864 KRTAP11-1Q8IUC1 163 aa11.7□□□□□ -0.54
MECP2-216ENST00000627864 RPL37AP8A6NKH3 93 aa11.69□□□□□ -0.54
MECP2-216ENST00000627864 NCR3O14931 201 aa11.69□□□□□ -0.54
MECP2-216ENST00000627864 SLC25A34Q6PIV7 304 aa11.69□□□□□ -0.54
MECP2-216ENST00000627864 M0R378 163 aa11.68□□□□□ -0.54
MECP2-216ENST00000627864 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
MECP2-216ENST00000627864 Q6ZVH6 145 aa11.68□□□□□ -0.54
MECP2-216ENST00000627864 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
MECP2-216ENST00000627864 NDUFC2O95298 119 aa11.66□□□□□ -0.54
MECP2-216ENST00000627864 IFITM1P13164 125 aa11.66□□□□□ -0.54
MECP2-216ENST00000627864 MUSTN1Q8IVN3 82 aa11.66□□□□□ -0.54
MECP2-216ENST00000627864 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
MECP2-216ENST00000627864 SPANXB1Q9NS25 103 aaPredicted RBP11.66□□□□□ -0.54
MECP2-216ENST00000627864 KRTAP10-4P60372 401 aaPredicted RBP11.65□□□□□ -0.54
MECP2-216ENST00000627864 COPS9Q8WXC6 57 aa11.65□□□□□ -0.54
MECP2-216ENST00000627864 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
MECP2-216ENST00000627864 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
MECP2-216ENST00000627864 C1orf137Q5JT78 98 aa11.64□□□□□ -0.55
MECP2-216ENST00000627864 IGLV1-50A0A075B6I6 118 aa11.63□□□□□ -0.55
MECP2-216ENST00000627864 SMIM6P0DI80 62 aa11.63□□□□□ -0.55
MECP2-216ENST00000627864 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
MECP2-216ENST00000627864 HIST1H4GQ99525 98 aa11.62□□□□□ -0.55
MECP2-216ENST00000627864 HERC2O95714 4834 aa11.61□□□□□ -0.55
MECP2-216ENST00000627864 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
MECP2-216ENST00000627864 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
MECP2-216ENST00000627864 PPDPFQ9H3Y8 114 aa11.6□□□□□ -0.55
MECP2-216ENST00000627864 TRBV10-3A0A0K0K1G6 114 aa11.59□□□□□ -0.55
MECP2-216ENST00000627864 S100A7L2Q5SY68 101 aa11.59□□□□□ -0.55
MECP2-216ENST00000627864 DDTP30046 118 aa11.58□□□□□ -0.56
MECP2-216ENST00000627864 LINC00518Q8N0U6 118 aa11.58□□□□□ -0.56
MECP2-216ENST00000627864 REG3GQ6UW15 175 aa11.57□□□□□ -0.56
MECP2-216ENST00000627864 OR13C6PQ8NH95 151 aa11.57□□□□□ -0.56
MECP2-216ENST00000627864 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
MECP2-216ENST00000627864 IGLV7-43P04211 117 aa11.56□□□□□ -0.56
MECP2-216ENST00000627864 HNRNPA3P51991 378 aaKnown RBP11.56□□□□□ -0.56
MECP2-216ENST00000627864 TMEM126AQ9H061 195 aa11.56□□□□□ -0.56
MECP2-216ENST00000627864 PRO1933Q9H354 126 aa11.56□□□□□ -0.56
MECP2-216ENST00000627864 FAT1Q14517 4588 aa11.55□□□□□ -0.56
MECP2-216ENST00000627864 BCE1O60756 84 aa11.55□□□□□ -0.56
MECP2-216ENST00000627864 INAFM2P0DMQ5 153 aa11.55□□□□□ -0.56
MECP2-216ENST00000627864 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
MECP2-216ENST00000627864 A4D1N5 150 aa11.54□□□□□ -0.56
MECP2-216ENST00000627864 PRYO14603 147 aa11.54□□□□□ -0.56
MECP2-216ENST00000627864 IGLV6-57P01721 117 aa11.54□□□□□ -0.56
MECP2-216ENST00000627864 KCNQ1DNQ9H478 68 aa11.54□□□□□ -0.56
MECP2-216ENST00000627864 LINC00337Q8N6G1 96 aa11.53□□□□□ -0.56
MECP2-216ENST00000627864 C12orf57Q99622 126 aa11.53□□□□□ -0.56
MECP2-216ENST00000627864 VPS13BQ7Z7G8 4022 aa11.52□□□□□ -0.56
MECP2-216ENST00000627864 TAL2Q16559 108 aa11.52□□□□□ -0.57
MECP2-216ENST00000627864 FAM19A1Q7Z5A9 133 aa11.51□□□□□ -0.57
MECP2-216ENST00000627864 A6NDN8 102 aa11.5□□□□□ -0.57
MECP2-216ENST00000627864 UBE2AP49459 152 aa11.5□□□□□ -0.57
MECP2-216ENST00000627864 TRAV23DV6A0A075B6W5 121 aa11.49□□□□□ -0.57
MECP2-216ENST00000627864 SPINK6Q6UWN8 80 aa11.49□□□□□ -0.57
MECP2-216ENST00000627864 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
MECP2-216ENST00000627864 ZNF861PO60384 105 aa11.48□□□□□ -0.57
MECP2-216ENST00000627864 RPL28P46779 137 aaKnown RBP11.48□□□□□ -0.57
MECP2-216ENST00000627864 CEND1Q8N111 149 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms