RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 COX8AP10176 69 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 CIRBPQ14011 172 aaKnown RBP5.43□□□□□ -1.54
SGMS1-211ENST00000626236 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 DPH3Q96FX2 82 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 C14orf144Q96I85 54 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 XAGE1AQ9HD64 81 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 FAM30AQ9NZY2 134 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
SGMS1-211ENST00000626236 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
SGMS1-211ENST00000626236 BOD1L2Q8IYS8 172 aa5.42□□□□□ -1.54
SGMS1-211ENST00000626236 MIR7-3HGQ8N6C7 128 aa5.42□□□□□ -1.54
SGMS1-211ENST00000626236 DAND5Q8N907 189 aa5.42□□□□□ -1.54
SGMS1-211ENST00000626236 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
SGMS1-211ENST00000626236 TIMM17BO60830 172 aa5.41□□□□□ -1.54
SGMS1-211ENST00000626236 HAMPP81172 84 aa5.41□□□□□ -1.54
SGMS1-211ENST00000626236 ADAMTSL4-AS1Q5T5F5 129 aa5.41□□□□□ -1.54
SGMS1-211ENST00000626236 SLC25A34Q6PIV7 304 aa5.41□□□□□ -1.54
SGMS1-211ENST00000626236 Q6ZSA8 131 aa5.41□□□□□ -1.54
SGMS1-211ENST00000626236 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
SGMS1-211ENST00000626236 FAM168BA1KXE4 195 aa5.4□□□□□ -1.54
SGMS1-211ENST00000626236 TMEM238C9JI98 176 aa5.4□□□□□ -1.54
SGMS1-211ENST00000626236 DLEU1O43261 78 aa5.4□□□□□ -1.54
SGMS1-211ENST00000626236 NPC2P61916 151 aa5.4□□□□□ -1.54
SGMS1-211ENST00000626236 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
SGMS1-211ENST00000626236 LITAFQ99732 161 aa5.4□□□□□ -1.54
SGMS1-211ENST00000626236 A0A087WYN8 130 aa5.39□□□□□ -1.55
SGMS1-211ENST00000626236 C21orf62-AS1Q17RA5 79 aa5.39□□□□□ -1.55
SGMS1-211ENST00000626236 SCXQ7RTU7 201 aa5.39□□□□□ -1.55
SGMS1-211ENST00000626236 CIRBP-AS1Q8TBR5 109 aa5.39□□□□□ -1.55
SGMS1-211ENST00000626236 C12orf57Q99622 126 aa5.39□□□□□ -1.55
SGMS1-211ENST00000626236 MIEN1Q9BRT3 115 aa5.39□□□□□ -1.55
SGMS1-211ENST00000626236 A0A1W2PNN7 141 aa5.38□□□□□ -1.55
SGMS1-211ENST00000626236 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
SGMS1-211ENST00000626236 SPANXDQ9BXN6 97 aa5.38□□□□□ -1.55
SGMS1-211ENST00000626236 SPANXCQ9NY87 97 aa5.38□□□□□ -1.55
SGMS1-211ENST00000626236 PLAC8Q9NZF1 115 aa5.38□□□□□ -1.55
SGMS1-211ENST00000626236 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
SGMS1-211ENST00000626236 XGP55808 180 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 SRSF9Q13242 221 aaKnown RBP eCLIP5.37□□□□□ -1.55
SGMS1-211ENST00000626236 SOSTDC1Q6X4U4 206 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 LINC00308Q8TCZ7 52 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 CDIP1Q9H305 208 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
SGMS1-211ENST00000626236 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 RYR1P21817 5038 aa5.37□□□□□ -1.55
SGMS1-211ENST00000626236 M0QXV9 152 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 CDK2AP2O75956 126 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 VPREB1P12018 145 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
SGMS1-211ENST00000626236 C2orf91Q6ZV80 131 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 Q6ZVH6 145 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 MUSTN1Q8IVN3 82 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 LINC00518Q8N0U6 118 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 NKAPP1Q8N9T2 125 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 Q8NDZ9 215 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 HIGD1BQ9P298 99 aa5.36□□□□□ -1.55
SGMS1-211ENST00000626236 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 LOC107984156A0A0G2JMH3 177 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 NCR3O14931 201 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 IFITM1P13164 125 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 PRR3P79522 188 aaKnown RBP5.35□□□□□ -1.55
SGMS1-211ENST00000626236 PHF5AQ7RTV0 110 aaKnown RBP5.35□□□□□ -1.55
SGMS1-211ENST00000626236 ARL17AQ8IVW1 177 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 C22orf24Q9Y442 160 aa5.35□□□□□ -1.55
SGMS1-211ENST00000626236 IGLV5-37A0A075B6J1 123 aa5.34□□□□□ -1.55
SGMS1-211ENST00000626236 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
SGMS1-211ENST00000626236 EPM2AB3EWF7 344 aa5.34□□□□□ -1.55
SGMS1-211ENST00000626236 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
SGMS1-211ENST00000626236 TSTD3H0UI37 97 aa5.33□□□□□ -1.56
SGMS1-211ENST00000626236 NDUFC2O95298 119 aa5.33□□□□□ -1.56
SGMS1-211ENST00000626236 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
SGMS1-211ENST00000626236 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
SGMS1-211ENST00000626236 HNRNPA3P51991 378 aaKnown RBP5.33□□□□□ -1.56
SGMS1-211ENST00000626236 UBE2BP63146 152 aa5.33□□□□□ -1.56
SGMS1-211ENST00000626236 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
SGMS1-211ENST00000626236 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
SGMS1-211ENST00000626236 LINC00167Q96N53 147 aa5.33□□□□□ -1.56
SGMS1-211ENST00000626236 HSPG2P98160 4391 aa5.32□□□□□ -1.56
SGMS1-211ENST00000626236 RPL37AP8A6NKH3 93 aa5.32□□□□□ -1.56
SGMS1-211ENST00000626236 M0R378 163 aa5.32□□□□□ -1.56
SGMS1-211ENST00000626236 PPDPFQ9H3Y8 114 aa5.32□□□□□ -1.56
SGMS1-211ENST00000626236 IGKV2-28A0A075B6P5 120 aa5.31□□□□□ -1.56
SGMS1-211ENST00000626236 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
SGMS1-211ENST00000626236 IGKV2D-28P01615 120 aa5.31□□□□□ -1.56
SGMS1-211ENST00000626236 HSD52Q0P140 79 aa5.31□□□□□ -1.56
SGMS1-211ENST00000626236 TAL2Q16559 108 aa5.31□□□□□ -1.56
SGMS1-211ENST00000626236 A4D1N5 150 aa5.3□□□□□ -1.56
SGMS1-211ENST00000626236 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
SGMS1-211ENST00000626236 KRTAP11-1Q8IUC1 163 aa5.3□□□□□ -1.56
SGMS1-211ENST00000626236 CEND1Q8N111 149 aa5.3□□□□□ -1.56
SGMS1-211ENST00000626236 OR13C6PQ8NH95 151 aa5.3□□□□□ -1.56
SGMS1-211ENST00000626236 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms