RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 HERV-K104P63124 156 aa7.54□□□□□ -1.2
CBWD3-218ENST00000622755 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
CBWD3-218ENST00000622755 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
CBWD3-218ENST00000622755 COLCA2A8K830 154 aa7.53□□□□□ -1.2
CBWD3-218ENST00000622755 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
CBWD3-218ENST00000622755 IGLV5-37A0A075B6J1 123 aa7.52□□□□□ -1.2
CBWD3-218ENST00000622755 FABP4P15090 132 aa7.52□□□□□ -1.2
CBWD3-218ENST00000622755 LINC00167Q96N53 147 aa7.52□□□□□ -1.2
CBWD3-218ENST00000622755 SND1-IT1Q9HBX3 110 aa7.52□□□□□ -1.2
CBWD3-218ENST00000622755 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
CBWD3-218ENST00000622755 GAGE10A6NGK3 116 aa7.52□□□□□ -1.21
CBWD3-218ENST00000622755 RPL37AP8A6NKH3 93 aa7.52□□□□□ -1.21
CBWD3-218ENST00000622755 ZNF861PO60384 105 aa7.52□□□□□ -1.21
CBWD3-218ENST00000622755 BCE1O60756 84 aa7.52□□□□□ -1.21
CBWD3-218ENST00000622755 DPM2O94777 84 aa7.51□□□□□ -1.21
CBWD3-218ENST00000622755 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
CBWD3-218ENST00000622755 UBE2AP49459 152 aa7.51□□□□□ -1.21
CBWD3-218ENST00000622755 KRTAP11-1Q8IUC1 163 aa7.51□□□□□ -1.21
CBWD3-218ENST00000622755 PLEKHB2Q96CS7 222 aa7.51□□□□□ -1.21
CBWD3-218ENST00000622755 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
CBWD3-218ENST00000622755 S100A12P80511 92 aa7.5□□□□□ -1.21
CBWD3-218ENST00000622755 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
CBWD3-218ENST00000622755 HERC1Q15751 4861 aa7.5□□□□□ -1.21
CBWD3-218ENST00000622755 IGKCP01834 107 aa7.49□□□□□ -1.21
CBWD3-218ENST00000622755 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
CBWD3-218ENST00000622755 A0A0U1RRA0 63 aa7.48□□□□□ -1.21
CBWD3-218ENST00000622755 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
CBWD3-218ENST00000622755 LGALS3P17931 250 aaKnown RBP7.48□□□□□ -1.21
CBWD3-218ENST00000622755 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
CBWD3-218ENST00000622755 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
CBWD3-218ENST00000622755 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
CBWD3-218ENST00000622755 LEPROTO15243 131 aa7.47□□□□□ -1.21
CBWD3-218ENST00000622755 NMUP48645 174 aa7.47□□□□□ -1.21
CBWD3-218ENST00000622755 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
CBWD3-218ENST00000622755 SMIM13P0DJ93 91 aa7.46□□□□□ -1.21
CBWD3-218ENST00000622755 VPREB1P12018 145 aa7.46□□□□□ -1.21
CBWD3-218ENST00000622755 LINC00310P59036 64 aa7.46□□□□□ -1.21
CBWD3-218ENST00000622755 HIST1H2BKO60814 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 SCO1O75880 301 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BJP06899 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BOP23527 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BBP33778 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BDP58876 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BCP62807 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST2H2BEQ16778 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.45□□□□□ -1.22
CBWD3-218ENST00000622755 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BHQ93079 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BNQ99877 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 HIST1H2BMQ99879 126 aa7.45□□□□□ -1.22
CBWD3-218ENST00000622755 J3QQQ9 107 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 M0R378 163 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 MIR7-3HGQ8N6C7 128 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 TMEM126AQ9H061 195 aa7.44□□□□□ -1.22
CBWD3-218ENST00000622755 IGKV2D-26A0A0A0MRZ7 120 aa7.43□□□□□ -1.22
CBWD3-218ENST00000622755 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
CBWD3-218ENST00000622755 CRYGAP11844 174 aa7.42□□□□□ -1.22
CBWD3-218ENST00000622755 C20orf202A1L168 122 aa7.41□□□□□ -1.22
CBWD3-218ENST00000622755 PET117Q6UWS5 81 aa7.41□□□□□ -1.22
CBWD3-218ENST00000622755 NCR3O14931 201 aa7.4□□□□□ -1.22
CBWD3-218ENST00000622755 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
CBWD3-218ENST00000622755 AKR1D1P51857 326 aa7.4□□□□□ -1.22
CBWD3-218ENST00000622755 TMEM238C9JI98 176 aa7.39□□□□□ -1.23
CBWD3-218ENST00000622755 E9PLD3 99 aa7.39□□□□□ -1.23
CBWD3-218ENST00000622755 PRYO14603 147 aa7.39□□□□□ -1.23
CBWD3-218ENST00000622755 PRLHP81277 87 aa7.39□□□□□ -1.23
CBWD3-218ENST00000622755 S100A1P23297 94 aa7.38□□□□□ -1.23
CBWD3-218ENST00000622755 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
CBWD3-218ENST00000622755 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
CBWD3-218ENST00000622755 CBY1Q9Y3M2 126 aa7.38□□□□□ -1.23
CBWD3-218ENST00000622755 ETDCA0A1B0GVM5 59 aa7.37□□□□□ -1.23
CBWD3-218ENST00000622755 KRTDAPP60985 99 aa7.37□□□□□ -1.23
CBWD3-218ENST00000622755 S100A7L2Q5SY68 101 aa7.37□□□□□ -1.23
CBWD3-218ENST00000622755 HIGD2AQ9BW72 106 aa7.37□□□□□ -1.23
CBWD3-218ENST00000622755 ZNF706Q9Y5V0 76 aaPredicted RBP7.37□□□□□ -1.23
CBWD3-218ENST00000622755 FAM229BQ4G0N7 80 aa7.36□□□□□ -1.23
CBWD3-218ENST00000622755 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
CBWD3-218ENST00000622755 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
CBWD3-218ENST00000622755 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 COA6Q5JTJ3 125 aaKnown RBP7.35□□□□□ -1.23
CBWD3-218ENST00000622755 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 DAND5Q8N907 189 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 NDUFC2O95298 119 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 DDTP30046 118 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 LINC00337Q8N6G1 96 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 Q8NDZ9 215 aa7.35□□□□□ -1.23
CBWD3-218ENST00000622755 A0A0J9YXY3 114 aa7.34□□□□□ -1.23
CBWD3-218ENST00000622755 C3orf79P0CE67 100 aa7.34□□□□□ -1.23
CBWD3-218ENST00000622755 KCNQ1DNQ9H478 68 aa7.34□□□□□ -1.23
CBWD3-218ENST00000622755 TRBV10-3A0A0K0K1G6 114 aa7.33□□□□□ -1.24
CBWD3-218ENST00000622755 ZNF815PA8K554 130 aa7.33□□□□□ -1.24
CBWD3-218ENST00000622755 S100A2P29034 98 aa7.33□□□□□ -1.24
CBWD3-218ENST00000622755 HINT1P49773 126 aaPredicted RBP7.33□□□□□ -1.24
CBWD3-218ENST00000622755 COPS9Q8WXC6 57 aa7.33□□□□□ -1.24
CBWD3-218ENST00000622755 TIMM17BO60830 172 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms