RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 TMEM126AQ9H061 195 aa11.36□□□□□ -0.59
LTBP4-239ENST00000622565 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
LTBP4-239ENST00000622565 LINC00310P59036 64 aa11.35□□□□□ -0.59
LTBP4-239ENST00000622565 PRLHP81277 87 aa11.35□□□□□ -0.59
LTBP4-239ENST00000622565 M0R378 163 aa11.34□□□□□ -0.59
LTBP4-239ENST00000622565 TRGC2P03986 189 aa11.34□□□□□ -0.59
LTBP4-239ENST00000622565 CRYGAP11844 174 aa11.34□□□□□ -0.59
LTBP4-239ENST00000622565 RPL24P83731 157 aaKnown RBP11.34□□□□□ -0.59
LTBP4-239ENST00000622565 TSPAN13O95857 204 aa11.33□□□□□ -0.6
LTBP4-239ENST00000622565 LINC00158P58513 81 aa11.33□□□□□ -0.6
LTBP4-239ENST00000622565 SFTA2Q6UW10 78 aa11.33□□□□□ -0.6
LTBP4-239ENST00000622565 HSBP1O75506 76 aa11.32□□□□□ -0.6
LTBP4-239ENST00000622565 PRR4Q16378 134 aa11.32□□□□□ -0.6
LTBP4-239ENST00000622565 FAM19A1Q7Z5A9 133 aa11.32□□□□□ -0.6
LTBP4-239ENST00000622565 TYMSOSQ8TAI1 123 aa11.32□□□□□ -0.6
LTBP4-239ENST00000622565 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
LTBP4-239ENST00000622565 H0Y8G0 127 aa11.28□□□□□ -0.6
LTBP4-239ENST00000622565 SERF1AO75920 110 aa11.28□□□□□ -0.6
LTBP4-239ENST00000622565 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
LTBP4-239ENST00000622565 FAM229BQ4G0N7 80 aa11.26□□□□□ -0.61
LTBP4-239ENST00000622565 LEPROTL1O95214 131 aa11.25□□□□□ -0.61
LTBP4-239ENST00000622565 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
LTBP4-239ENST00000622565 PLEKHB2Q96CS7 222 aa11.25□□□□□ -0.61
LTBP4-239ENST00000622565 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
LTBP4-239ENST00000622565 COLCA2A8K830 154 aa11.24□□□□□ -0.61
LTBP4-239ENST00000622565 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
LTBP4-239ENST00000622565 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
LTBP4-239ENST00000622565 NCR3O14931 201 aa11.22□□□□□ -0.61
LTBP4-239ENST00000622565 HERV-K104P63124 156 aa11.22□□□□□ -0.61
LTBP4-239ENST00000622565 PMCHL2Q9BQD1 86 aa11.22□□□□□ -0.61
LTBP4-239ENST00000622565 HIGD2AQ9BW72 106 aa11.22□□□□□ -0.61
LTBP4-239ENST00000622565 FABP4P15090 132 aa11.21□□□□□ -0.61
LTBP4-239ENST00000622565 LEPROTO15243 131 aa11.2□□□□□ -0.62
LTBP4-239ENST00000622565 ATP6V1G1O75348 118 aa11.2□□□□□ -0.62
LTBP4-239ENST00000622565 C3orf22Q8N5N4 141 aa11.2□□□□□ -0.62
LTBP4-239ENST00000622565 IGKV2D-26A0A0A0MRZ7 120 aa11.19□□□□□ -0.62
LTBP4-239ENST00000622565 MYMXA0A1B0GTQ4 84 aa11.19□□□□□ -0.62
LTBP4-239ENST00000622565 DAND5Q8N907 189 aa11.19□□□□□ -0.62
LTBP4-239ENST00000622565 LINC00304Q8N9R0 145 aa11.19□□□□□ -0.62
LTBP4-239ENST00000622565 RETNLBQ9BQ08 111 aa11.19□□□□□ -0.62
LTBP4-239ENST00000622565 SPRR1AP35321 89 aa11.18□□□□□ -0.62
LTBP4-239ENST00000622565 KRTAP4-16G5E9R7 235 aaPredicted RBP11.17□□□□□ -0.62
LTBP4-239ENST00000622565 PRYO14603 147 aa11.17□□□□□ -0.62
LTBP4-239ENST00000622565 SPRR4Q96PI1 79 aa11.17□□□□□ -0.62
LTBP4-239ENST00000622565 KCNQ1DNQ9H478 68 aa11.17□□□□□ -0.62
LTBP4-239ENST00000622565 TRBV10-3A0A0K0K1G6 114 aa11.16□□□□□ -0.62
LTBP4-239ENST00000622565 DPM2O94777 84 aa11.16□□□□□ -0.62
LTBP4-239ENST00000622565 PLNP26678 52 aa11.16□□□□□ -0.62
LTBP4-239ENST00000622565 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
LTBP4-239ENST00000622565 MUC2Q02817 5179 aa11.15□□□□□ -0.62
LTBP4-239ENST00000622565 LINC00587B1AMM8 73 aa11.15□□□□□ -0.62
LTBP4-239ENST00000622565 J3QQQ9 107 aa11.15□□□□□ -0.62
LTBP4-239ENST00000622565 LOC107984156A0A0G2JMH3 177 aa11.14□□□□□ -0.63
LTBP4-239ENST00000622565 ARL17AQ8IVW1 177 aa11.14□□□□□ -0.63
LTBP4-239ENST00000622565 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
LTBP4-239ENST00000622565 IGKCP01834 107 aa11.13□□□□□ -0.63
LTBP4-239ENST00000622565 MAP1LC3CQ9BXW4 147 aa11.13□□□□□ -0.63
LTBP4-239ENST00000622565 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
LTBP4-239ENST00000622565 ETDCA0A1B0GVM5 59 aa11.09□□□□□ -0.63
LTBP4-239ENST00000622565 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
LTBP4-239ENST00000622565 HERVK_113P61574 105 aa11.09□□□□□ -0.63
LTBP4-239ENST00000622565 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.64
LTBP4-239ENST00000622565 NMUP48645 174 aa11.08□□□□□ -0.64
LTBP4-239ENST00000622565 SOSTDC1Q6X4U4 206 aa11.08□□□□□ -0.64
LTBP4-239ENST00000622565 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
LTBP4-239ENST00000622565 B5MCH6 92 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BKO60814 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BJP06899 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BOP23527 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 DDTP30046 118 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BBP33778 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BDP58876 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BCP62807 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST2H2BEQ16778 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.07□□□□□ -0.64
LTBP4-239ENST00000622565 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BHQ93079 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BNQ99877 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 HIST1H2BMQ99879 126 aa11.07□□□□□ -0.64
LTBP4-239ENST00000622565 ZNF706Q9Y5V0 76 aaPredicted RBP11.07□□□□□ -0.64
LTBP4-239ENST00000622565 A0A0J9YXY3 114 aa11.06□□□□□ -0.64
LTBP4-239ENST00000622565 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
LTBP4-239ENST00000622565 E9PLD3 99 aa11.05□□□□□ -0.64
LTBP4-239ENST00000622565 S100A1P23297 94 aa11.05□□□□□ -0.64
LTBP4-239ENST00000622565 NPC2P61916 151 aa11.05□□□□□ -0.64
LTBP4-239ENST00000622565 SYS1-DBNDD2H3BUS1 97 aa11.04□□□□□ -0.64
LTBP4-239ENST00000622565 Q9BRP9 147 aa11.04□□□□□ -0.64
LTBP4-239ENST00000622565 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
LTBP4-239ENST00000622565 CTAG1AP78358 180 aa11.03□□□□□ -0.64
LTBP4-239ENST00000622565 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
LTBP4-239ENST00000622565 IGLV7-46A0A075B6I9 117 aa11.02□□□□□ -0.65
LTBP4-239ENST00000622565 NDUFC2O95298 119 aa11.02□□□□□ -0.65
LTBP4-239ENST00000622565 IGLV6-57P01721 117 aa11.02□□□□□ -0.65
LTBP4-239ENST00000622565 Q8NBF4 154 aa11.02□□□□□ -0.65
LTBP4-239ENST00000622565 MIEN1Q9BRT3 115 aa11.01□□□□□ -0.65
LTBP4-239ENST00000622565 MUC17Q685J3 4493 aa11□□□□□ -0.65
LTBP4-239ENST00000622565 TPRXLQ17RH7 258 aa11□□□□□ -0.65
LTBP4-239ENST00000622565 GAGE2AQ6NT46 116 aa11□□□□□ -0.65
LTBP4-239ENST00000622565 SPAG11AQ6PDA7 123 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms