RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 DEFB114Q30KQ6 69 aa1.47□□□□□ -2.17
CPNE3-213ENST00000622183 DEFB132Q7Z7B7 95 aa1.47□□□□□ -2.17
CPNE3-213ENST00000622183 MUSTN1Q8IVN3 82 aa1.47□□□□□ -2.17
CPNE3-213ENST00000622183 CEP192Q8TEP8 1941 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 IGIPA6NJ69 53 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 NDUFB1O75438 58 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 DNAL4O96015 105 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 PLNP26678 52 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 CSAG1Q6PB30 78 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 SPRR4Q96PI1 79 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 ESPL1Q14674 2120 aa1.46□□□□□ -2.18
CPNE3-213ENST00000622183 INE1O15225 51 aa1.45□□□□□ -2.18
CPNE3-213ENST00000622183 PPP1R17O96001 155 aa1.45□□□□□ -2.18
CPNE3-213ENST00000622183 CCL18P55774 89 aa1.45□□□□□ -2.18
CPNE3-213ENST00000622183 PATE1Q8WXA2 126 aa1.45□□□□□ -2.18
CPNE3-213ENST00000622183 DNAJC13O75165 2243 aa1.45□□□□□ -2.18
CPNE3-213ENST00000622183 CACNA1BQ00975 2339 aa1.45□□□□□ -2.18
CPNE3-213ENST00000622183 A0A1B0GUT8 65 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 TRBV6-4A0A1B0GX49 114 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 M0R135 149 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 PRB4P10163 310 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-213ENST00000622183 CCL3L1P16619 93 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 SPINT3P49223 89 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 NREPQ16612 68 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 SFTA2Q6UW10 78 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 LINC00322Q6ZN03 302 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-213ENST00000622183 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 WFDC6Q9BQY6 131 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 PRR15LQ9BU68 103 aa1.44□□□□□ -2.18
CPNE3-213ENST00000622183 F8VRH5 84 aa1.43□□□□□ -2.18
CPNE3-213ENST00000622183 PDE6GP18545 87 aa1.43□□□□□ -2.18
CPNE3-213ENST00000622183 ZNF137PP52743 207 aa1.43□□□□□ -2.18
CPNE3-213ENST00000622183 C10orf113Q5VZT2 155 aa1.43□□□□□ -2.18
CPNE3-213ENST00000622183 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
CPNE3-213ENST00000622183 TMEM14CQ9P0S9 112 aa1.43□□□□□ -2.18
CPNE3-213ENST00000622183 SSC5DA1L4H1 1573 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 TRBV6-1A0A0K0K1D8 114 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 K7EMI3 77 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 PIN1P1O15428 100 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 FCER1GP30273 86 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 LINC00208Q96KT6 92 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 WFDC10AQ9H1F0 79 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 MRPL36Q9P0J6 103 aaKnown RBP1.42□□□□□ -2.18
CPNE3-213ENST00000622183 TECTAO75443 2155 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 COL6A6A6NMZ7 2263 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 FBN3Q75N90 2809 aa1.42□□□□□ -2.18
CPNE3-213ENST00000622183 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
CPNE3-213ENST00000622183 JMJD7-PLA2G4BH0Y9G9 81 aa1.41□□□□□ -2.18
CPNE3-213ENST00000622183 UQCR11O14957 56 aa1.41□□□□□ -2.18
CPNE3-213ENST00000622183 MGPP08493 103 aa1.41□□□□□ -2.18
CPNE3-213ENST00000622183 UBL5Q9BZL1 73 aa1.41□□□□□ -2.18
CPNE3-213ENST00000622183 A0A087WTM6 91 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 TRAV21A0A0B4J279 112 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 H0Y9P7 68 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 I3L3M4 83 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 TFF1P04155 84 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 ENHOQ6UWT2 76 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 KCNQ1DNQ9H478 68 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 R4GMQ9 66 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 CACNA1CQ13936 2221 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 SPAG17Q6Q759 2223 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 ABCA4P78363 2273 aa1.4□□□□□ -2.19
CPNE3-213ENST00000622183 IGLV3-1P01715 115 aa1.39□□□□□ -2.19
CPNE3-213ENST00000622183 SPINK7P58062 85 aa1.39□□□□□ -2.19
CPNE3-213ENST00000622183 LINC00472Q9H8W2 130 aa1.39□□□□□ -2.19
CPNE3-213ENST00000622183 TNCP24821 2201 aa1.39□□□□□ -2.19
CPNE3-213ENST00000622183 NBDYA0A0U1RRE5 68 aa1.38□□□□□ -2.19
CPNE3-213ENST00000622183 CNFNQ9BYD5 112 aa1.38□□□□□ -2.19
CPNE3-213ENST00000622183 TMEM167BQ9NRX6 74 aa1.38□□□□□ -2.19
CPNE3-213ENST00000622183 GOLGA4Q13439 2230 aaKnown RBP1.38□□□□□ -2.19
CPNE3-213ENST00000622183 LINC00959A0A1B0GUT2 108 aa1.37□□□□□ -2.19
CPNE3-213ENST00000622183 M0R1W7 72 aa1.37□□□□□ -2.19
CPNE3-213ENST00000622183 FXYD6P3P58550 94 aa1.37□□□□□ -2.19
CPNE3-213ENST00000622183 COX17Q14061 63 aa1.37□□□□□ -2.19
CPNE3-213ENST00000622183 FDCSPQ8NFU4 85 aa1.37□□□□□ -2.19
CPNE3-213ENST00000622183 H0YGX0 51 aa1.36□□□□□ -2.19
CPNE3-213ENST00000622183 M0R3E3 92 aa1.36□□□□□ -2.19
CPNE3-213ENST00000622183 BPTFQ12830 3046 aa1.35□□□□□ -2.19
CPNE3-213ENST00000622183 UNC13CQ8NB66 2214 aa1.35□□□□□ -2.19
CPNE3-213ENST00000622183 NDUFA4O00483 81 aa1.35□□□□□ -2.19
CPNE3-213ENST00000622183 FXYD3Q14802 87 aa1.35□□□□□ -2.19
CPNE3-213ENST00000622183 Q96NJ1 140 aa1.35□□□□□ -2.19
CPNE3-213ENST00000622183 SPINK4O60575 86 aa1.34□□□□□ -2.19
CPNE3-213ENST00000622183 ETDCA0A1B0GVM5 59 aa1.33□□□□□ -2.2
CPNE3-213ENST00000622183 C5orf56Q8N8D9 126 aa1.33□□□□□ -2.2
CPNE3-213ENST00000622183 WFDC9Q8NEX5 89 aa1.33□□□□□ -2.2
CPNE3-213ENST00000622183 GAFA1Q96PS6 74 aa1.33□□□□□ -2.2
CPNE3-213ENST00000622183 TENM1Q9UKZ4 2725 aa1.32□□□□□ -2.2
CPNE3-213ENST00000622183 DEFB131BA0A096LNP1 70 aa1.32□□□□□ -2.2
CPNE3-213ENST00000622183 TRGV1A0A0A0MS02 117 aa1.32□□□□□ -2.2
CPNE3-213ENST00000622183 CPSF4LA6NMK7 179 aaKnown RBP1.32□□□□□ -2.2
CPNE3-213ENST00000622183 COX7BP24311 80 aa1.32□□□□□ -2.2
CPNE3-213ENST00000622183 RPL37AP61513 92 aaKnown RBP1.32□□□□□ -2.2
CPNE3-213ENST00000622183 MED13LQ71F56 2210 aa1.32□□□□□ -2.2
CPNE3-213ENST00000622183 F5P12259 2224 aa1.31□□□□□ -2.2
CPNE3-213ENST00000622183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-213ENST00000622183 NDUFA3O95167 84 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms