RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	ATR	Q13535	2644 aa		12.02	□□□□□ -0.49
CDK16-223	ENST00000622098	LELP1	Q5T871	98 aa		12.01	□□□□□ -0.49
CDK16-223	ENST00000622098	MIF	P14174	115 aa		12	□□□□□ -0.49
CDK16-223	ENST00000622098	SPART-AS1	P0CW21	52 aa		12	□□□□□ -0.49
CDK16-223	ENST00000622098	LINC00575	Q6W349	94 aa		12	□□□□□ -0.49
CDK16-223	ENST00000622098	SVIP	Q8NHG7	77 aa		12	□□□□□ -0.49
CDK16-223	ENST00000622098	NSD1	Q96L73	2696 aa	Predicted RBP	11.99	□□□□□ -0.49
CDK16-223	ENST00000622098	INAFM1	C9JVW0	142 aa		11.98	□□□□□ -0.49
CDK16-223	ENST00000622098	HIVEP1	P15822	2718 aa		11.98	□□□□□ -0.49
CDK16-223	ENST00000622098		A0A0J9YWU9	116 aa		11.97	□□□□□ -0.49
CDK16-223	ENST00000622098	IGHV4-30-4	P0DP06	118 aa		11.97	□□□□□ -0.49
CDK16-223	ENST00000622098	PRR34	Q9NV39	138 aa		11.97	□□□□□ -0.49
CDK16-223	ENST00000622098	hADV29S1	A0JD25	119 aa		11.97	□□□□□ -0.49
CDK16-223	ENST00000622098	ENHO	Q6UWT2	76 aa		11.97	□□□□□ -0.49
CDK16-223	ENST00000622098	USP17L23	D6RBM5	183 aa		11.96	□□□□□ -0.5
CDK16-223	ENST00000622098	WFDC9	Q8NEX5	89 aa		11.96	□□□□□ -0.5
CDK16-223	ENST00000622098	CRYGA	P11844	174 aa		11.94	□□□□□ -0.5
CDK16-223	ENST00000622098	IGLV6-57	P01721	117 aa		11.94	□□□□□ -0.5
CDK16-223	ENST00000622098	XAGE1A	Q9HD64	81 aa		11.94	□□□□□ -0.5
CDK16-223	ENST00000622098	TEP1	Q99973	2627 aa	Known RBP	11.94	□□□□□ -0.5
CDK16-223	ENST00000622098	MUC7	Q8TAX7	377 aa		11.94	□□□□□ -0.5
CDK16-223	ENST00000622098	LAMTOR3	Q9UHA4	124 aa		11.93	□□□□□ -0.5
CDK16-223	ENST00000622098	RBM3	P98179	157 aa	Known RBP	11.93	□□□□□ -0.5
CDK16-223	ENST00000622098	C6orf48	Q9UBA6	75 aa		11.92	□□□□□ -0.5
CDK16-223	ENST00000622098	SERP2	Q8N6R1	65 aa		11.92	□□□□□ -0.5
CDK16-223	ENST00000622098	CYSTM1	Q9H1C7	97 aa		11.92	□□□□□ -0.5
CDK16-223	ENST00000622098	LYPD5	Q6UWN5	251 aa		11.91	□□□□□ -0.5
CDK16-223	ENST00000622098	UBL5	Q9BZL1	73 aa		11.91	□□□□□ -0.5
CDK16-223	ENST00000622098	TRBV10-3	A0A0K0K1G6	114 aa		11.91	□□□□□ -0.5
CDK16-223	ENST00000622098	ZNF561-AS1	K7EIQ3	104 aa		11.91	□□□□□ -0.5
CDK16-223	ENST00000622098		Q6ZQY7	126 aa		11.91	□□□□□ -0.5
CDK16-223	ENST00000622098	ATP5EP2	Q5VTU8	51 aa		11.9	□□□□□ -0.5
CDK16-223	ENST00000622098	FAM19A1	Q7Z5A9	133 aa		11.9	□□□□□ -0.5
CDK16-223	ENST00000622098		Q6ZQT0	140 aa		11.9	□□□□□ -0.5
CDK16-223	ENST00000622098	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK16-223	ENST00000622098	TRAV23DV6	A0A075B6W5	121 aa		11.88	□□□□□ -0.51
CDK16-223	ENST00000622098	HIGD2B	Q4VC39	106 aa		11.87	□□□□□ -0.51
CDK16-223	ENST00000622098		M0R2N4	97 aa		11.87	□□□□□ -0.51
CDK16-223	ENST00000622098	WFDC10B	Q8IUB3	73 aa		11.86	□□□□□ -0.51
CDK16-223	ENST00000622098	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK16-223	ENST00000622098	DIRC1	Q969H9	104 aa		11.86	□□□□□ -0.51
CDK16-223	ENST00000622098	LOC110117498	A0A087WWA1	95 aa		11.85	□□□□□ -0.51
CDK16-223	ENST00000622098	DSCR8	Q96T75	97 aa		11.85	□□□□□ -0.51
CDK16-223	ENST00000622098	UPK3B	Q9BT76	320 aa		11.85	□□□□□ -0.51
CDK16-223	ENST00000622098	PKD1L1	Q8TDX9	2849 aa		11.84	□□□□□ -0.51
CDK16-223	ENST00000622098	CAMK2N2	Q96S95	79 aa		11.84	□□□□□ -0.51
CDK16-223	ENST00000622098	ZNF73	O43830	326 aa	Predicted RBP	11.83	□□□□□ -0.52
CDK16-223	ENST00000622098	GHRH	P01286	108 aa		11.83	□□□□□ -0.52
CDK16-223	ENST00000622098	LOC107984640	A0A0U1RRK4	108 aa		11.82	□□□□□ -0.52
CDK16-223	ENST00000622098	KPRP	Q5T749	579 aa	Predicted RBP	11.82	□□□□□ -0.52
CDK16-223	ENST00000622098	RETN	Q9HD89	108 aa		11.82	□□□□□ -0.52
CDK16-223	ENST00000622098	COX7B	P24311	80 aa		11.8	□□□□□ -0.52
CDK16-223	ENST00000622098	HAMP	P81172	84 aa		11.79	□□□□□ -0.52
CDK16-223	ENST00000622098	VPREB1	P12018	145 aa		11.79	□□□□□ -0.52
CDK16-223	ENST00000622098		Q6ZRU5	148 aa		11.79	□□□□□ -0.52
CDK16-223	ENST00000622098	LINC01547	P58512	204 aa	Predicted RBP	11.78	□□□□□ -0.52
CDK16-223	ENST00000622098		Q6ZVQ6	151 aa		11.78	□□□□□ -0.52
CDK16-223	ENST00000622098	ELOF1	P60002	83 aa	Known RBP	11.78	□□□□□ -0.52
CDK16-223	ENST00000622098		Q6ZTC4	211 aa		11.78	□□□□□ -0.52
CDK16-223	ENST00000622098	KRTAP26-1	Q6PEX3	210 aa		11.77	□□□□□ -0.52
CDK16-223	ENST00000622098	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.77	□□□□□ -0.52
CDK16-223	ENST00000622098		J3KT08	172 aa		11.77	□□□□□ -0.53
CDK16-223	ENST00000622098	WIPF1	O43516	503 aa		11.77	□□□□□ -0.53
CDK16-223	ENST00000622098		H3BQ85	93 aa		11.76	□□□□□ -0.53
CDK16-223	ENST00000622098	EGFEM1P	Q0D2K5	195 aa		11.76	□□□□□ -0.53
CDK16-223	ENST00000622098	PDE6G	P18545	87 aa		11.76	□□□□□ -0.53
CDK16-223	ENST00000622098	OXLD1	Q5BKU9	147 aa		11.76	□□□□□ -0.53
CDK16-223	ENST00000622098	C15orf56	Q8N910	161 aa		11.76	□□□□□ -0.53
CDK16-223	ENST00000622098	TMEM258	P61165	79 aa		11.76	□□□□□ -0.53
CDK16-223	ENST00000622098	ANK2	Q01484	3957 aa		11.74	□□□□□ -0.53
CDK16-223	ENST00000622098	NDUFC2-KCTD14	E9PQ53	114 aa		11.73	□□□□□ -0.53
CDK16-223	ENST00000622098		H3BNG1	76 aa		11.73	□□□□□ -0.53
CDK16-223	ENST00000622098		M0R378	163 aa		11.73	□□□□□ -0.53
CDK16-223	ENST00000622098	ESRG	Q1W209	222 aa		11.73	□□□□□ -0.53
CDK16-223	ENST00000622098	TRBV7-4	A0A0J9YYF1	115 aa		11.73	□□□□□ -0.53
CDK16-223	ENST00000622098	TRBV7-6	A0A0J9YX20	115 aa		11.72	□□□□□ -0.53
CDK16-223	ENST00000622098	TENM3	Q9P273	2699 aa		11.72	□□□□□ -0.53
CDK16-223	ENST00000622098	C1orf43	Q9BWL3	253 aa		11.71	□□□□□ -0.53
CDK16-223	ENST00000622098	KRTAP10-11	P60412	298 aa		11.7	□□□□□ -0.54
CDK16-223	ENST00000622098		Q6ZRP5	223 aa		11.7	□□□□□ -0.54
CDK16-223	ENST00000622098	C20orf197	Q8N268	126 aa		11.7	□□□□□ -0.54
CDK16-223	ENST00000622098	IGKV2D-24	A0A075B6R9	120 aa		11.7	□□□□□ -0.54
CDK16-223	ENST00000622098	DPH3	Q96FX2	82 aa		11.7	□□□□□ -0.54
CDK16-223	ENST00000622098	LINC00528	Q8N1L1	170 aa		11.69	□□□□□ -0.54
CDK16-223	ENST00000622098	RPS28	P62857	69 aa	Known RBP	11.69	□□□□□ -0.54
CDK16-223	ENST00000622098	SCX	Q7RTU7	201 aa		11.68	□□□□□ -0.54
CDK16-223	ENST00000622098	CXCL6	P80162	114 aa		11.68	□□□□□ -0.54
CDK16-223	ENST00000622098	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.67	□□□□□ -0.54
CDK16-223	ENST00000622098	TRAV10	A0A0B4J240	114 aa		11.67	□□□□□ -0.54
CDK16-223	ENST00000622098	SYCN	Q0VAF6	134 aa		11.64	□□□□□ -0.55
CDK16-223	ENST00000622098	TRAV7	A0A075B6U4	112 aa		11.64	□□□□□ -0.55
CDK16-223	ENST00000622098	LINC01556	Q5JQF7	62 aa		11.64	□□□□□ -0.55
CDK16-223	ENST00000622098	DEFB131B	A0A096LNP1	70 aa		11.63	□□□□□ -0.55
CDK16-223	ENST00000622098	BCE1	O60756	84 aa		11.61	□□□□□ -0.55
CDK16-223	ENST00000622098	NKAPP1	Q8N9T2	125 aa		11.61	□□□□□ -0.55
CDK16-223	ENST00000622098	OXT	P01178	125 aa		11.61	□□□□□ -0.55
CDK16-223	ENST00000622098	SERTAD4-AS1	Q5TG53	156 aa		11.61	□□□□□ -0.55
CDK16-223	ENST00000622098	C11orf45	Q8TAV5	145 aa		11.59	□□□□□ -0.55
CDK16-223	ENST00000622098	STAB1	Q9NY15	2570 aa		11.59	□□□□□ -0.55
CDK16-223	ENST00000622098	DEFB105A	Q8NG35	78 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms