RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 HIGD1CA8MV81 97 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 C1orf196B1AJZ1 125 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 K7EMI3 77 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 M0QXV9 152 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 M0QY20 66 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 ZNF73O43830 326 aaPredicted RBP1.47□□□□□ -2.17
MALAT1-216ENST00000620465 IGLC6P0CF74 106 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 IFI27P40305 119 aaPredicted RBP1.47□□□□□ -2.17
MALAT1-216ENST00000620465 CRIP1P50238 77 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 FOXA3P55318 350 aaPredicted RBP1.47□□□□□ -2.17
MALAT1-216ENST00000620465 HBBP68871 147 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 ATP5L2Q7Z4Y8 100 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 LINC00269Q8N2A0 174 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 IMMP2LQ96T52 175 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 C20orf78Q9BR46 151 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 CNFNQ9BYD5 112 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 RNASE7Q9H1E1 156 aaKnown RBP1.47□□□□□ -2.17
MALAT1-216ENST00000620465 MAP1LC3AQ9H492 121 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 LAMTOR2Q9Y2Q5 125 aa1.47□□□□□ -2.17
MALAT1-216ENST00000620465 HUWE1Q7Z6Z7 4374 aaKnown RBP1.46□□□□□ -2.18
MALAT1-216ENST00000620465 TRAV9-1A0A075B6T8 112 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 TRBV6-5A0A0K0K1A5 114 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 G3V3Q6 166 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 COX7A2LO14548 114 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 MT-ND6P03923 174 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 SRP19P09132 144 aaKnown RBP1.46□□□□□ -2.18
MALAT1-216ENST00000620465 FGF6P10767 208 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 RAB5BP61020 215 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 S100A12P80511 92 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 RHEBQ15382 184 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 GATD1Q8NB37 220 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 DEFB104AQ8WTQ1 72 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 PACRGQ96M98 296 aaPredicted RBP1.46□□□□□ -2.18
MALAT1-216ENST00000620465 C20orf166-AS1Q96NR2 134 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 TIMM21Q9BVV7 248 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 NXT2Q9NPJ8 142 aaKnown RBP1.46□□□□□ -2.18
MALAT1-216ENST00000620465 SMCO4Q9NRQ5 59 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 SPANXA1Q9NS26 97 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 CYSLTR1Q9Y271 337 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
MALAT1-216ENST00000620465 FLG2Q5D862 2391 aaPredicted RBP1.45□□□□□ -2.18
MALAT1-216ENST00000620465 HECTD4Q9Y4D8 3996 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 TRBV24-1A0A075B6N3 115 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 TRBV27A0A0K0K1C4 114 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 LOC107984640A0A0U1RRK4 108 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 SMIM27A0A1W2PRY6 76 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 H3BRM9 83 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 LECT2O14960 151 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 NDUFA1O15239 70 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 LINC00694P0DN24 101 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 S100A2P29034 98 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 XCL1P47992 114 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 CKS1BP61024 79 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 RPL37AP61513 92 aaKnown RBP1.45□□□□□ -2.18
MALAT1-216ENST00000620465 MRPL54Q6P161 138 aaKnown RBP1.45□□□□□ -2.18
MALAT1-216ENST00000620465 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 CLPSL2Q6UWE3 100 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 Q6ZRN7 208 aaPredicted RBP1.45□□□□□ -2.18
MALAT1-216ENST00000620465 MRPL52Q86TS9 123 aaKnown RBP1.45□□□□□ -2.18
MALAT1-216ENST00000620465 C9orf163Q8N9P6 203 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 NUP35Q8NFH5 326 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 OR10D4PQ8NGN7 298 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 CARD19Q96LW7 228 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 PRELID3AQ96N28 172 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 SMIM2Q9BVW6 85 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
MALAT1-216ENST00000620465 DYNC2H1Q8NCM8 4307 aaKnown RBP1.45□□□□□ -2.18
MALAT1-216ENST00000620465 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 TRAV13-1A0A0B4J241 112 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 TRAV26-2A0A0B4J265 109 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 LINC00959A0A1B0GUT2 108 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 IGKV2-29A2NJV5 120 aaPredicted RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 LINC00587B1AMM8 73 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 D6R8Y8 96 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 POLR2KP53803 58 aaKnown RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 CNBPP62633 177 aaKnown RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 HERVK_113P63121 156 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 MRPS36P82909 103 aaKnown RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 MRPL51Q4U2R6 128 aaKnown RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 CLLU1Q5K131 121 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 Q5VSD8 79 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 ENHOQ6UWT2 76 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 RPL39LQ96EH5 51 aaKnown RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 TMEM141Q96I45 108 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 SEC11CQ9BY50 192 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 CDC42SE2Q9NRR3 84 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 TMEM242Q9NWH2 141 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 V9GYV3 84 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 KMT2CQ8NEZ4 4911 aaKnown RBP1.44□□□□□ -2.18
MALAT1-216ENST00000620465 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
MALAT1-216ENST00000620465 GVQW2A0A096LPI5 108 aaPredicted RBP1.43□□□□□ -2.18
MALAT1-216ENST00000620465 TRBV30A0A0K0K1B3 111 aa1.43□□□□□ -2.18
MALAT1-216ENST00000620465 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
MALAT1-216ENST00000620465 ESDP10768 282 aa1.43□□□□□ -2.18
MALAT1-216ENST00000620465 ZNF22P17026 224 aaPredicted RBP1.43□□□□□ -2.18
MALAT1-216ENST00000620465 AKR1D1P51857 326 aa1.43□□□□□ -2.18
MALAT1-216ENST00000620465 UBE2BP63146 152 aa1.43□□□□□ -2.18
MALAT1-216ENST00000620465 SPAG11BQ08648 103 aa1.43□□□□□ -2.18
MALAT1-216ENST00000620465 FABP9Q0Z7S8 132 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms