RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SNAPINO95295 136 aa12.87□□□□□ -0.35
SRRT-218ENST00000620394 APOC3P02656 99 aa12.87□□□□□ -0.35
SRRT-218ENST00000620394 PRLHP81277 87 aa12.86□□□□□ -0.35
SRRT-218ENST00000620394 SVBPQ8N300 66 aa12.86□□□□□ -0.35
SRRT-218ENST00000620394 TMEM238C9JI98 176 aa12.85□□□□□ -0.35
SRRT-218ENST00000620394 M0R378 163 aa12.85□□□□□ -0.35
SRRT-218ENST00000620394 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
SRRT-218ENST00000620394 CHTOPQ9Y3Y2 248 aaKnown RBP12.85□□□□□ -0.35
SRRT-218ENST00000620394 NDUFA5Q16718 116 aa12.84□□□□□ -0.35
SRRT-218ENST00000620394 FAM19A1Q7Z5A9 133 aa12.84□□□□□ -0.35
SRRT-218ENST00000620394 TRAV12-1A0A0B4J245 112 aa12.83□□□□□ -0.36
SRRT-218ENST00000620394 CHCHD1Q96BP2 118 aaKnown RBP12.83□□□□□ -0.36
SRRT-218ENST00000620394 TMEM223A0PJW6 202 aa12.82□□□□□ -0.36
SRRT-218ENST00000620394 LINC00304Q8N9R0 145 aa12.8□□□□□ -0.36
SRRT-218ENST00000620394 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
SRRT-218ENST00000620394 LINC00158P58513 81 aa12.78□□□□□ -0.36
SRRT-218ENST00000620394 CTAG1AP78358 180 aa12.78□□□□□ -0.36
SRRT-218ENST00000620394 IGKV2D-26A0A0A0MRZ7 120 aa12.77□□□□□ -0.37
SRRT-218ENST00000620394 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.37
SRRT-218ENST00000620394 CBLN2Q8IUK8 224 aa12.75□□□□□ -0.37
SRRT-218ENST00000620394 A0A0U1RRA0 63 aa12.72□□□□□ -0.37
SRRT-218ENST00000620394 TPRXLQ17RH7 258 aa12.72□□□□□ -0.37
SRRT-218ENST00000620394 HIGD2AQ9BW72 106 aa12.72□□□□□ -0.37
SRRT-218ENST00000620394 CDIP1Q9H305 208 aa12.72□□□□□ -0.37
SRRT-218ENST00000620394 PRYO14603 147 aa12.71□□□□□ -0.37
SRRT-218ENST00000620394 SMIM13P0DJ93 91 aa12.71□□□□□ -0.37
SRRT-218ENST00000620394 HERV-K104P63124 156 aa12.71□□□□□ -0.37
SRRT-218ENST00000620394 RETNLBQ9BQ08 111 aa12.71□□□□□ -0.37
SRRT-218ENST00000620394 HSBP1O75506 76 aa12.7□□□□□ -0.38
SRRT-218ENST00000620394 C3orf22Q8N5N4 141 aa12.7□□□□□ -0.38
SRRT-218ENST00000620394 SPRR4Q96PI1 79 aa12.7□□□□□ -0.38
SRRT-218ENST00000620394 SPRR1AP35321 89 aa12.69□□□□□ -0.38
SRRT-218ENST00000620394 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
SRRT-218ENST00000620394 MEIG1Q5JSS6 88 aa12.68□□□□□ -0.38
SRRT-218ENST00000620394 BOD1L2Q8IYS8 172 aa12.68□□□□□ -0.38
SRRT-218ENST00000620394 FAM19A2Q8N3H0 131 aa12.68□□□□□ -0.38
SRRT-218ENST00000620394 NDUFA12Q9UI09 145 aa12.68□□□□□ -0.38
SRRT-218ENST00000620394 MUC17Q685J3 4493 aa12.68□□□□□ -0.38
SRRT-218ENST00000620394 LINC00337Q8N6G1 96 aa12.67□□□□□ -0.38
SRRT-218ENST00000620394 KCNQ1DNQ9H478 68 aa12.67□□□□□ -0.38
SRRT-218ENST00000620394 LINC00587B1AMM8 73 aa12.66□□□□□ -0.38
SRRT-218ENST00000620394 KRTAP4-16G5E9R7 235 aaPredicted RBP12.66□□□□□ -0.38
SRRT-218ENST00000620394 ATP6V1G1O75348 118 aa12.66□□□□□ -0.38
SRRT-218ENST00000620394 ZNF706Q9Y5V0 76 aaPredicted RBP12.66□□□□□ -0.38
SRRT-218ENST00000620394 NCR3O14931 201 aa12.65□□□□□ -0.38
SRRT-218ENST00000620394 LINC00310P59036 64 aa12.65□□□□□ -0.38
SRRT-218ENST00000620394 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
SRRT-218ENST00000620394 TSPEAR-AS2P59090 65 aa12.63□□□□□ -0.39
SRRT-218ENST00000620394 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
SRRT-218ENST00000620394 TRGC2P03986 189 aa12.62□□□□□ -0.39
SRRT-218ENST00000620394 MAP1LC3CQ9BXW4 147 aa12.62□□□□□ -0.39
SRRT-218ENST00000620394 IGLV7-46A0A075B6I9 117 aa12.61□□□□□ -0.39
SRRT-218ENST00000620394 LOC107984156A0A0G2JMH3 177 aa12.61□□□□□ -0.39
SRRT-218ENST00000620394 LEPROTL1O95214 131 aa12.61□□□□□ -0.39
SRRT-218ENST00000620394 ARL17AQ8IVW1 177 aa12.61□□□□□ -0.39
SRRT-218ENST00000620394 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
SRRT-218ENST00000620394 LEPROTO15243 131 aa12.6□□□□□ -0.39
SRRT-218ENST00000620394 SERF1AO75920 110 aa12.6□□□□□ -0.39
SRRT-218ENST00000620394 H0Y8G0 127 aa12.59□□□□□ -0.39
SRRT-218ENST00000620394 PLNP26678 52 aa12.59□□□□□ -0.39
SRRT-218ENST00000620394 SMCR5Q8TEV8 140 aa12.58□□□□□ -0.4
SRRT-218ENST00000620394 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
SRRT-218ENST00000620394 LINC00483Q53H64 154 aa12.57□□□□□ -0.4
SRRT-218ENST00000620394 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
SRRT-218ENST00000620394 J3QQQ9 107 aa12.55□□□□□ -0.4
SRRT-218ENST00000620394 NMUP48645 174 aa12.54□□□□□ -0.4
SRRT-218ENST00000620394 FP248Q71RG6 208 aaPredicted RBP12.54□□□□□ -0.4
SRRT-218ENST00000620394 DAND5Q8N907 189 aa12.54□□□□□ -0.4
SRRT-218ENST00000620394 Q8NBF4 154 aa12.54□□□□□ -0.4
SRRT-218ENST00000620394 PPDPFQ9H3Y8 114 aa12.54□□□□□ -0.4
SRRT-218ENST00000620394 HSPB8Q9UJY1 196 aa12.54□□□□□ -0.4
SRRT-218ENST00000620394 B5MCH6 92 aa12.53□□□□□ -0.4
SRRT-218ENST00000620394 DPM2O94777 84 aa12.53□□□□□ -0.4
SRRT-218ENST00000620394 S100A12P80511 92 aa12.53□□□□□ -0.4
SRRT-218ENST00000620394 HERVK_113P61574 105 aa12.52□□□□□ -0.41
SRRT-218ENST00000620394 DDTP30046 118 aa12.51□□□□□ -0.41
SRRT-218ENST00000620394 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
SRRT-218ENST00000620394 SPANXB1Q9NS25 103 aaPredicted RBP12.51□□□□□ -0.41
SRRT-218ENST00000620394 IGKCP01834 107 aa12.5□□□□□ -0.41
SRRT-218ENST00000620394 C4orf48Q5BLP8 95 aa12.5□□□□□ -0.41
SRRT-218ENST00000620394 NDUFC2O95298 119 aa12.49□□□□□ -0.41
SRRT-218ENST00000620394 Q6ZRX8 168 aa12.49□□□□□ -0.41
SRRT-218ENST00000620394 PMCHL2Q9BQD1 86 aa12.49□□□□□ -0.41
SRRT-218ENST00000620394 ERC2-IT1O76042 136 aa12.48□□□□□ -0.41
SRRT-218ENST00000620394 SPINK1P00995 79 aa12.48□□□□□ -0.41
SRRT-218ENST00000620394 FABP4P15090 132 aa12.48□□□□□ -0.41
SRRT-218ENST00000620394 LGALS3P17931 250 aaKnown RBP12.48□□□□□ -0.41
SRRT-218ENST00000620394 Q9BRP9 147 aa12.48□□□□□ -0.41
SRRT-218ENST00000620394 MIEN1Q9BRT3 115 aa12.48□□□□□ -0.41
SRRT-218ENST00000620394 IGLV6-57P01721 117 aa12.47□□□□□ -0.41
SRRT-218ENST00000620394 LINC01547P58512 204 aaPredicted RBP12.47□□□□□ -0.41
SRRT-218ENST00000620394 COLCA2A8K830 154 aa12.46□□□□□ -0.41
SRRT-218ENST00000620394 GAGE2AQ6NT46 116 aa12.46□□□□□ -0.41
SRRT-218ENST00000620394 RPS29P62273 56 aaKnown RBP12.44□□□□□ -0.42
SRRT-218ENST00000620394 KRTAP13-3Q3SY46 172 aa12.44□□□□□ -0.42
SRRT-218ENST00000620394 SOSTDC1Q6X4U4 206 aa12.44□□□□□ -0.42
SRRT-218ENST00000620394 CRCT1Q9UGL9 99 aa12.44□□□□□ -0.42
SRRT-218ENST00000620394 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
SRRT-218ENST00000620394 E9PLD3 99 aa12.42□□□□□ -0.42
SRRT-218ENST00000620394 MOBPQ13875 183 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms