RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
SRRT-216ENST00000618262 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
SRRT-216ENST00000618262 S100A4P26447 101 aaKnown RBP8.42□□□□□ -1.06
SRRT-216ENST00000618262 Q6ZRP5 223 aa8.42□□□□□ -1.06
SRRT-216ENST00000618262 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
SRRT-216ENST00000618262 KLLNB2CW77 178 aa8.41□□□□□ -1.06
SRRT-216ENST00000618262 INSP01308 110 aa8.41□□□□□ -1.06
SRRT-216ENST00000618262 KRTAP21-3Q3LHN1 58 aa8.41□□□□□ -1.06
SRRT-216ENST00000618262 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
SRRT-216ENST00000618262 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
SRRT-216ENST00000618262 IGHV3-73A0A0B4J1V6 119 aa8.4□□□□□ -1.06
SRRT-216ENST00000618262 LEPROTO15243 131 aa8.4□□□□□ -1.06
SRRT-216ENST00000618262 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
SRRT-216ENST00000618262 SMIM2Q9BVW6 85 aa8.4□□□□□ -1.06
SRRT-216ENST00000618262 H0Y9J4 135 aa8.4□□□□□ -1.06
SRRT-216ENST00000618262 CNFNQ9BYD5 112 aa8.4□□□□□ -1.06
SRRT-216ENST00000618262 TENM2Q9NT68 2774 aa8.4□□□□□ -1.07
SRRT-216ENST00000618262 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.07
SRRT-216ENST00000618262 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.07
SRRT-216ENST00000618262 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.07
SRRT-216ENST00000618262 IGHV3-53P01767 116 aa8.39□□□□□ -1.07
SRRT-216ENST00000618262 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
SRRT-216ENST00000618262 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
SRRT-216ENST00000618262 ZNF575Q86XF7 245 aa8.39□□□□□ -1.07
SRRT-216ENST00000618262 NOP10Q9NPE3 64 aaKnown RBP8.39□□□□□ -1.07
SRRT-216ENST00000618262 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
SRRT-216ENST00000618262 PRYO14603 147 aa8.38□□□□□ -1.07
SRRT-216ENST00000618262 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
SRRT-216ENST00000618262 CSNK1G2-AS1Q8NCQ2 148 aa8.38□□□□□ -1.07
SRRT-216ENST00000618262 C14orf132Q9NPU4 83 aa8.38□□□□□ -1.07
SRRT-216ENST00000618262 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
SRRT-216ENST00000618262 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
SRRT-216ENST00000618262 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
SRRT-216ENST00000618262 C11orf72Q8NBR9 251 aa8.37□□□□□ -1.07
SRRT-216ENST00000618262 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
SRRT-216ENST00000618262 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
SRRT-216ENST00000618262 FAM74A4Q5TZK3 123 aa8.37□□□□□ -1.07
SRRT-216ENST00000618262 HTN3P15516 51 aa8.36□□□□□ -1.07
SRRT-216ENST00000618262 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
SRRT-216ENST00000618262 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
SRRT-216ENST00000618262 MUC4Q99102 2169 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 TRGV1A0A0A0MS02 117 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 C6orf99Q4VX62 202 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 IGHV4-28A0A0C4DH34 117 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
SRRT-216ENST00000618262 Q6ZTI0 123 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 LYSTQ99698 3801 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 X6R8D5 127 aa8.35□□□□□ -1.07
SRRT-216ENST00000618262 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
SRRT-216ENST00000618262 RNASE3P12724 160 aaKnown RBP8.34□□□□□ -1.07
SRRT-216ENST00000618262 A0A0J9YWU9 116 aa8.34□□□□□ -1.07
SRRT-216ENST00000618262 CXCL6P80162 114 aa8.34□□□□□ -1.07
SRRT-216ENST00000618262 SPANXN1Q5VSR9 72 aa8.34□□□□□ -1.07
SRRT-216ENST00000618262 CELA1Q9UNI1 258 aa8.34□□□□□ -1.07
SRRT-216ENST00000618262 LENEPQ9Y5L5 61 aa8.34□□□□□ -1.07
SRRT-216ENST00000618262 MIAQ16674 131 aa8.33□□□□□ -1.08
SRRT-216ENST00000618262 LITAFQ99732 161 aa8.33□□□□□ -1.08
SRRT-216ENST00000618262 A8MTW9 85 aa8.32□□□□□ -1.08
SRRT-216ENST00000618262 HCG22E2RYF7 251 aa8.32□□□□□ -1.08
SRRT-216ENST00000618262 TRGV2A0A075B6R0 118 aa8.31□□□□□ -1.08
SRRT-216ENST00000618262 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
SRRT-216ENST00000618262 TRBV7-4A0A0J9YYF1 115 aa8.3□□□□□ -1.08
SRRT-216ENST00000618262 OBSCN-AS1Q96MR7 158 aa8.3□□□□□ -1.08
SRRT-216ENST00000618262 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
SRRT-216ENST00000618262 MGPP08493 103 aa8.3□□□□□ -1.08
SRRT-216ENST00000618262 NANOS2P60321 138 aaKnown RBP8.3□□□□□ -1.08
SRRT-216ENST00000618262 REG3AQ06141 175 aa8.3□□□□□ -1.08
SRRT-216ENST00000618262 IGHV3-64A0A075B6Q5 118 aa8.29□□□□□ -1.08
SRRT-216ENST00000618262 F5H697 171 aa8.29□□□□□ -1.08
SRRT-216ENST00000618262 Q6ZTC4 211 aa8.29□□□□□ -1.08
SRRT-216ENST00000618262 Q8NAQ8 132 aa8.29□□□□□ -1.08
SRRT-216ENST00000618262 TSHBP01222 138 aa8.28□□□□□ -1.08
SRRT-216ENST00000618262 A0A096LPF7 62 aa8.28□□□□□ -1.08
SRRT-216ENST00000618262 CHKB-CPT1BH3BT56 60 aa8.28□□□□□ -1.08
SRRT-216ENST00000618262 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
SRRT-216ENST00000618262 Q9HAA7 133 aa8.28□□□□□ -1.08
SRRT-216ENST00000618262 TRAV10A0A0B4J240 114 aa8.27□□□□□ -1.09
SRRT-216ENST00000618262 C16orf74Q96GX8 76 aa8.26□□□□□ -1.09
SRRT-216ENST00000618262 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
SRRT-216ENST00000618262 Q5VV11 94 aa8.26□□□□□ -1.09
SRRT-216ENST00000618262 Q6ZSN1 163 aa8.26□□□□□ -1.09
SRRT-216ENST00000618262 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
SRRT-216ENST00000618262 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
SRRT-216ENST00000618262 LOC100131303A0A0U1RQF7 123 aa8.25□□□□□ -1.09
SRRT-216ENST00000618262 B9D2Q9BPU9 175 aa8.25□□□□□ -1.09
SRRT-216ENST00000618262 ERC2-IT1O76042 136 aa8.25□□□□□ -1.09
SRRT-216ENST00000618262 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
SRRT-216ENST00000618262 IGHV3-30-3P0DP02 117 aa8.22□□□□□ -1.09
SRRT-216ENST00000618262 TRGV4A0A0C4DH28 118 aa8.22□□□□□ -1.09
SRRT-216ENST00000618262 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
SRRT-216ENST00000618262 SPART-AS1P0CW21 52 aa8.22□□□□□ -1.09
SRRT-216ENST00000618262 RPL39LQ96EH5 51 aaKnown RBP8.22□□□□□ -1.09
SRRT-216ENST00000618262 NCR3O14931 201 aa8.2□□□□□ -1.1
SRRT-216ENST00000618262 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
SRRT-216ENST00000618262 PRAC1Q96KF2 57 aa8.2□□□□□ -1.1
SRRT-216ENST00000618262 NREPQ16612 68 aa8.19□□□□□ -1.1
SRRT-216ENST00000618262 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
SRRT-216ENST00000618262 STARD9Q9P2P6 4700 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms