RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 C9orf129Q5T035 196 aaKnown RBP14.36□□□□□ -0.11
CBWD3-213ENST00000618217 A0A087WYN8 130 aa14.34□□□□□ -0.11
CBWD3-213ENST00000618217 PLAC8Q9NZF1 115 aa14.34□□□□□ -0.11
CBWD3-213ENST00000618217 A0A0J9YXY3 114 aa14.33□□□□□ -0.11
CBWD3-213ENST00000618217 EPM2AB3EWF7 344 aa14.33□□□□□ -0.11
CBWD3-213ENST00000618217 SMIM13P0DJ93 91 aa14.33□□□□□ -0.11
CBWD3-213ENST00000618217 HSD52Q0P140 79 aa14.33□□□□□ -0.11
CBWD3-213ENST00000618217 DPH3Q96FX2 82 aa14.33□□□□□ -0.11
CBWD3-213ENST00000618217 XAGE1AQ9HD64 81 aa14.33□□□□□ -0.11
CBWD3-213ENST00000618217 KIAA1109Q2LD37 5005 aa14.32□□□□□ -0.12
CBWD3-213ENST00000618217 LINC00158P58513 81 aa14.32□□□□□ -0.12
CBWD3-213ENST00000618217 A0A0U1RRA0 63 aa14.31□□□□□ -0.12
CBWD3-213ENST00000618217 A0A1W2PNN7 141 aa14.31□□□□□ -0.12
CBWD3-213ENST00000618217 MEIG1Q5JSS6 88 aa14.31□□□□□ -0.12
CBWD3-213ENST00000618217 KRTAP7-1Q8IUC3 87 aa14.3□□□□□ -0.12
CBWD3-213ENST00000618217 SND1-IT1Q9HBX3 110 aa14.3□□□□□ -0.12
CBWD3-213ENST00000618217 FAM168BA1KXE4 195 aa14.3□□□□□ -0.12
CBWD3-213ENST00000618217 BVES-AS1Q5T3Y7 98 aa14.3□□□□□ -0.12
CBWD3-213ENST00000618217 HIST1H4GQ99525 98 aa14.28□□□□□ -0.12
CBWD3-213ENST00000618217 MIR7-3HGQ8N6C7 128 aa14.27□□□□□ -0.12
CBWD3-213ENST00000618217 LITAFQ99732 161 aa14.27□□□□□ -0.12
CBWD3-213ENST00000618217 TAL2Q16559 108 aa14.26□□□□□ -0.13
CBWD3-213ENST00000618217 ADAMTSL4-AS1Q5T5F5 129 aa14.26□□□□□ -0.13
CBWD3-213ENST00000618217 RYR1P21817 5038 aa14.26□□□□□ -0.13
CBWD3-213ENST00000618217 TIMM17BO60830 172 aa14.26□□□□□ -0.13
CBWD3-213ENST00000618217 HSPG2P98160 4391 aa14.24□□□□□ -0.13
CBWD3-213ENST00000618217 SRSF9Q13242 221 aaKnown RBP eCLIP14.24□□□□□ -0.13
CBWD3-213ENST00000618217 SERTAD4-AS1Q5TG53 156 aa14.24□□□□□ -0.13
CBWD3-213ENST00000618217 CEND1Q8N111 149 aa14.24□□□□□ -0.13
CBWD3-213ENST00000618217 DAND5Q8N907 189 aa14.24□□□□□ -0.13
CBWD3-213ENST00000618217 SPANXB1Q9NS25 103 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-213ENST00000618217 PLA2G2DQ9UNK4 145 aa14.24□□□□□ -0.13
CBWD3-213ENST00000618217 TMEM238C9JI98 176 aa14.23□□□□□ -0.13
CBWD3-213ENST00000618217 FAM19A5Q7Z5A7 132 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-213ENST00000618217 LBHQ53QV2 105 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-213ENST00000618217 KRTAP17-1Q9BYP8 105 aa14.22□□□□□ -0.13
CBWD3-213ENST00000618217 LOC107984156A0A0G2JMH3 177 aa14.21□□□□□ -0.13
CBWD3-213ENST00000618217 ARL17AQ8IVW1 177 aa14.21□□□□□ -0.13
CBWD3-213ENST00000618217 Q8NDZ9 215 aa14.21□□□□□ -0.13
CBWD3-213ENST00000618217 SMR3BP02814 79 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-213ENST00000618217 FXYD2P54710 66 aa14.2□□□□□ -0.14
CBWD3-213ENST00000618217 COL5A1-AS1Q5SY13 56 aa14.2□□□□□ -0.14
CBWD3-213ENST00000618217 EIF4EBP3O60516 100 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-213ENST00000618217 IGLV5-37A0A075B6J1 123 aa14.18□□□□□ -0.14
CBWD3-213ENST00000618217 VPREB1P12018 145 aa14.18□□□□□ -0.14
CBWD3-213ENST00000618217 SOSTDC1Q6X4U4 206 aa14.17□□□□□ -0.14
CBWD3-213ENST00000618217 C22orf24Q9Y442 160 aa14.17□□□□□ -0.14
CBWD3-213ENST00000618217 A6NDN8 102 aa14.16□□□□□ -0.14
CBWD3-213ENST00000618217 PHF5AQ7RTV0 110 aaKnown RBP14.16□□□□□ -0.14
CBWD3-213ENST00000618217 M0QXV9 152 aa14.15□□□□□ -0.14
CBWD3-213ENST00000618217 SPANXDQ9BXN6 97 aa14.15□□□□□ -0.14
CBWD3-213ENST00000618217 SPANXCQ9NY87 97 aa14.15□□□□□ -0.14
CBWD3-213ENST00000618217 LINC00528Q8N1L1 170 aa14.14□□□□□ -0.15
CBWD3-213ENST00000618217 LINC00308Q8TCZ7 52 aa14.14□□□□□ -0.15
CBWD3-213ENST00000618217 RPL24P83731 157 aaKnown RBP14.13□□□□□ -0.15
CBWD3-213ENST00000618217 NHP2Q9NX24 153 aaKnown RBP14.13□□□□□ -0.15
CBWD3-213ENST00000618217 MUSTN1Q8IVN3 82 aa14.12□□□□□ -0.15
CBWD3-213ENST00000618217 NPC2P61916 151 aa14.12□□□□□ -0.15
CBWD3-213ENST00000618217 Q6ZVH6 145 aa14.12□□□□□ -0.15
CBWD3-213ENST00000618217 Q8N1X5 172 aa14.12□□□□□ -0.15
CBWD3-213ENST00000618217 TMEM238LA0A1B0GVL6 79 aa14.11□□□□□ -0.15
CBWD3-213ENST00000618217 A6NJY4 79 aa14.11□□□□□ -0.15
CBWD3-213ENST00000618217 PRR3P79522 188 aaKnown RBP14.11□□□□□ -0.15
CBWD3-213ENST00000618217 MRPL55Q7Z7F7 128 aaKnown RBP14.11□□□□□ -0.15
CBWD3-213ENST00000618217 KRTAP11-1Q8IUC1 163 aa14.11□□□□□ -0.15
CBWD3-213ENST00000618217 NKAPP1Q8N9T2 125 aa14.1□□□□□ -0.15
CBWD3-213ENST00000618217 C7orf33Q8WU49 177 aa14.1□□□□□ -0.15
CBWD3-213ENST00000618217 K7ERJ3 54 aa14.08□□□□□ -0.15
CBWD3-213ENST00000618217 LINC00167Q96N53 147 aa14.08□□□□□ -0.15
CBWD3-213ENST00000618217 PPDPFQ9H3Y8 114 aa14.08□□□□□ -0.16
CBWD3-213ENST00000618217 FAT1Q14517 4588 aa14.07□□□□□ -0.16
CBWD3-213ENST00000618217 TAX1BP3O14907 124 aa14.07□□□□□ -0.16
CBWD3-213ENST00000618217 NDUFC2O95298 119 aa14.07□□□□□ -0.16
CBWD3-213ENST00000618217 IFITM1P13164 125 aa14.07□□□□□ -0.16
CBWD3-213ENST00000618217 A4D1N5 150 aa14.06□□□□□ -0.16
CBWD3-213ENST00000618217 KRTAP10-4P60372 401 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-213ENST00000618217 HERC2O95714 4834 aa14.06□□□□□ -0.16
CBWD3-213ENST00000618217 FAM229AH3BQW9 127 aa14.05□□□□□ -0.16
CBWD3-213ENST00000618217 RAB37Q96AX2 223 aa14.05□□□□□ -0.16
CBWD3-213ENST00000618217 A0A1B0GV90 55 aa14.04□□□□□ -0.16
CBWD3-213ENST00000618217 GAGE10A6NGK3 116 aa14.04□□□□□ -0.16
CBWD3-213ENST00000618217 M0R378 163 aa14.04□□□□□ -0.16
CBWD3-213ENST00000618217 Q5VSD8 79 aa14.04□□□□□ -0.16
CBWD3-213ENST00000618217 VPS13BQ7Z7G8 4022 aa14.04□□□□□ -0.16
CBWD3-213ENST00000618217 A0A1B0GWB2 263 aa14.03□□□□□ -0.16
CBWD3-213ENST00000618217 RPL37AP8A6NKH3 93 aa14.03□□□□□ -0.16
CBWD3-213ENST00000618217 NCR3O14931 201 aa14.03□□□□□ -0.16
CBWD3-213ENST00000618217 COPS9Q8WXC6 57 aa14.03□□□□□ -0.16
CBWD3-213ENST00000618217 PSORS1C2Q9UIG4 136 aa14.03□□□□□ -0.16
CBWD3-213ENST00000618217 SRRM2Q9UQ35 2752 aaKnown RBP14.02□□□□□ -0.16
CBWD3-213ENST00000618217 UBE2BP63146 152 aa14.02□□□□□ -0.16
CBWD3-213ENST00000618217 IGLV1-50A0A075B6I6 118 aa14.01□□□□□ -0.17
CBWD3-213ENST00000618217 TRBV10-2A0A0K0K1G8 114 aa14.01□□□□□ -0.17
CBWD3-213ENST00000618217 RPL37AP61513 92 aaKnown RBP14.01□□□□□ -0.17
CBWD3-213ENST00000618217 IGKV2-28A0A075B6P5 120 aa14□□□□□ -0.17
CBWD3-213ENST00000618217 IGKV2D-28P01615 120 aa14□□□□□ -0.17
CBWD3-213ENST00000618217 CFC1BP0CG36 223 aa14□□□□□ -0.17
CBWD3-213ENST00000618217 CFC1P0CG37 223 aa14□□□□□ -0.17
CBWD3-213ENST00000618217 KRTAP4-5Q9BYR2 181 aa14□□□□□ -0.17
CBWD3-213ENST00000618217 PLA2G1BP04054 148 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms