RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 RTL8CO15255 209 aa7.6□□□□□ -1.19
PDPN-211ENST00000617617 LOC107984640A0A0U1RRK4 108 aa7.59□□□□□ -1.19
PDPN-211ENST00000617617 C9orf163Q8N9P6 203 aa7.59□□□□□ -1.19
PDPN-211ENST00000617617 A0A1B0GV72 72 aa7.59□□□□□ -1.19
PDPN-211ENST00000617617 DAND5Q8N907 189 aa7.59□□□□□ -1.19
PDPN-211ENST00000617617 A4D1N5 150 aa7.58□□□□□ -1.2
PDPN-211ENST00000617617 LECT2O14960 151 aa7.58□□□□□ -1.2
PDPN-211ENST00000617617 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
PDPN-211ENST00000617617 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
PDPN-211ENST00000617617 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
PDPN-211ENST00000617617 CFC1BP0CG36 223 aa7.57□□□□□ -1.2
PDPN-211ENST00000617617 CFC1P0CG37 223 aa7.57□□□□□ -1.2
PDPN-211ENST00000617617 Q6ZRP5 223 aa7.57□□□□□ -1.2
PDPN-211ENST00000617617 RYR2Q92736 4967 aa7.57□□□□□ -1.2
PDPN-211ENST00000617617 IGLV5-37A0A075B6J1 123 aa7.56□□□□□ -1.2
PDPN-211ENST00000617617 TRBV10-2A0A0K0K1G8 114 aa7.56□□□□□ -1.2
PDPN-211ENST00000617617 A0A0U1RRA0 63 aa7.56□□□□□ -1.2
PDPN-211ENST00000617617 TAX1BP3O14907 124 aa7.56□□□□□ -1.2
PDPN-211ENST00000617617 LINC00336Q6ZUF6 198 aa7.56□□□□□ -1.2
PDPN-211ENST00000617617 C16orf90A8MZG2 172 aa7.55□□□□□ -1.2
PDPN-211ENST00000617617 PKD1P98161 4303 aa7.55□□□□□ -1.2
PDPN-211ENST00000617617 SCGB1A1P11684 91 aa7.55□□□□□ -1.2
PDPN-211ENST00000617617 EPM2AB3EWF7 344 aa7.54□□□□□ -1.2
PDPN-211ENST00000617617 C9orf129Q5T035 196 aaKnown RBP7.54□□□□□ -1.2
PDPN-211ENST00000617617 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
PDPN-211ENST00000617617 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
PDPN-211ENST00000617617 TRAV13-2A0A0B4J235 113 aa7.54□□□□□ -1.2
PDPN-211ENST00000617617 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
PDPN-211ENST00000617617 PRO1854Q9UHT4 67 aa7.54□□□□□ -1.2
PDPN-211ENST00000617617 TNP2Q05952 138 aa7.53□□□□□ -1.2
PDPN-211ENST00000617617 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
PDPN-211ENST00000617617 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
PDPN-211ENST00000617617 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
PDPN-211ENST00000617617 VPREB1P12018 145 aa7.52□□□□□ -1.21
PDPN-211ENST00000617617 NPC2P61916 151 aa7.52□□□□□ -1.21
PDPN-211ENST00000617617 Q8NDZ9 215 aa7.51□□□□□ -1.21
PDPN-211ENST00000617617 RAB37Q96AX2 223 aa7.51□□□□□ -1.21
PDPN-211ENST00000617617 PGPEP1Q9NXJ5 209 aa7.51□□□□□ -1.21
PDPN-211ENST00000617617 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.51□□□□□ -1.21
PDPN-211ENST00000617617 RPL18AQ02543 176 aaKnown RBP7.51□□□□□ -1.21
PDPN-211ENST00000617617 C9orf118A6NHY6 69 aa7.5□□□□□ -1.21
PDPN-211ENST00000617617 DNAH5Q8TE73 4624 aa7.5□□□□□ -1.21
PDPN-211ENST00000617617 K7ERJ3 54 aa7.5□□□□□ -1.21
PDPN-211ENST00000617617 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
PDPN-211ENST00000617617 A0A096LNI7 61 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 GAGE10A6NGK3 116 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 M0R378 163 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
PDPN-211ENST00000617617 TSPAN13O95857 204 aa7.48□□□□□ -1.21
PDPN-211ENST00000617617 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
PDPN-211ENST00000617617 IGLV5-52A0A0A0MRZ9 124 aa7.48□□□□□ -1.21
PDPN-211ENST00000617617 TMEM126AQ9H061 195 aa7.48□□□□□ -1.21
PDPN-211ENST00000617617 GTF2H5Q6ZYL4 71 aa7.47□□□□□ -1.21
PDPN-211ENST00000617617 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
PDPN-211ENST00000617617 SPACA4Q8TDM5 124 aa7.47□□□□□ -1.21
PDPN-211ENST00000617617 RPL13AP40429 203 aaKnown RBP7.47□□□□□ -1.21
PDPN-211ENST00000617617 RPL28P46779 137 aaKnown RBP7.47□□□□□ -1.21
PDPN-211ENST00000617617 GAGE2BQ13066 116 aa7.46□□□□□ -1.21
PDPN-211ENST00000617617 KMT2CQ8NEZ4 4911 aaKnown RBP7.46□□□□□ -1.22
PDPN-211ENST00000617617 A0A1B0GVY2 172 aa7.46□□□□□ -1.22
PDPN-211ENST00000617617 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.22
PDPN-211ENST00000617617 NCR3O14931 201 aa7.44□□□□□ -1.22
PDPN-211ENST00000617617 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
PDPN-211ENST00000617617 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
PDPN-211ENST00000617617 Q6ZSA8 131 aa7.44□□□□□ -1.22
PDPN-211ENST00000617617 TRBV7-6A0A0J9YX20 115 aa7.43□□□□□ -1.22
PDPN-211ENST00000617617 A0A1W2PPM0 123 aa7.43□□□□□ -1.22
PDPN-211ENST00000617617 LYRM7Q5U5X0 104 aa7.43□□□□□ -1.22
PDPN-211ENST00000617617 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
PDPN-211ENST00000617617 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
PDPN-211ENST00000617617 PLAC8Q9NZF1 115 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 C22orf24Q9Y442 160 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 A0A1W2PNN7 141 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 H3BUT2 72 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
PDPN-211ENST00000617617 MRPL55Q7Z7F7 128 aaKnown RBP7.42□□□□□ -1.22
PDPN-211ENST00000617617 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
PDPN-211ENST00000617617 K7EP34 96 aa7.41□□□□□ -1.22
PDPN-211ENST00000617617 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
PDPN-211ENST00000617617 PRYO14603 147 aa7.41□□□□□ -1.22
PDPN-211ENST00000617617 TRIAP1O43715 76 aa7.41□□□□□ -1.22
PDPN-211ENST00000617617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
PDPN-211ENST00000617617 SPRR1AP35321 89 aa7.4□□□□□ -1.22
PDPN-211ENST00000617617 IGKV2-24A0A0C4DH68 120 aa7.4□□□□□ -1.23
PDPN-211ENST00000617617 CHTF8P0CG12 524 aa7.4□□□□□ -1.23
PDPN-211ENST00000617617 FABP2P12104 132 aa7.4□□□□□ -1.23
PDPN-211ENST00000617617 MTURNQ8N3F0 131 aa7.4□□□□□ -1.23
PDPN-211ENST00000617617 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 PANO1I0J062 215 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 LINC00167Q96N53 147 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 H0YGX0 51 aa7.39□□□□□ -1.23
PDPN-211ENST00000617617 M0QXV9 152 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms