RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
PCDHGC3-204ENST00000617222 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
PCDHGC3-204ENST00000617222 PLA2G2DQ9UNK4 145 aa9.81□□□□□ -0.84
PCDHGC3-204ENST00000617222 NPC2P61916 151 aa9.8□□□□□ -0.84
PCDHGC3-204ENST00000617222 PHF5AQ7RTV0 110 aaKnown RBP9.8□□□□□ -0.84
PCDHGC3-204ENST00000617222 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
PCDHGC3-204ENST00000617222 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
PCDHGC3-204ENST00000617222 S100A12P80511 92 aa9.79□□□□□ -0.84
PCDHGC3-204ENST00000617222 Q8NDZ9 215 aa9.79□□□□□ -0.84
PCDHGC3-204ENST00000617222 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 TMEM238C9JI98 176 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 M0QXV9 152 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 DLEU1O43261 78 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 VPREB1P12018 145 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 RPL24P83731 157 aaKnown RBP9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 KIAA1109Q2LD37 5005 aa9.78□□□□□ -0.84
PCDHGC3-204ENST00000617222 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
PCDHGC3-204ENST00000617222 SLC25A34Q6PIV7 304 aa9.77□□□□□ -0.85
PCDHGC3-204ENST00000617222 NKAPP1Q8N9T2 125 aa9.77□□□□□ -0.85
PCDHGC3-204ENST00000617222 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
PCDHGC3-204ENST00000617222 MIEN1Q9BRT3 115 aa9.77□□□□□ -0.85
PCDHGC3-204ENST00000617222 RYR1P21817 5038 aa9.77□□□□□ -0.85
PCDHGC3-204ENST00000617222 IGLV5-37A0A075B6J1 123 aa9.76□□□□□ -0.85
PCDHGC3-204ENST00000617222 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
PCDHGC3-204ENST00000617222 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
PCDHGC3-204ENST00000617222 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
PCDHGC3-204ENST00000617222 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
PCDHGC3-204ENST00000617222 HSPG2P98160 4391 aa9.76□□□□□ -0.85
PCDHGC3-204ENST00000617222 SMIM6P0DI80 62 aa9.75□□□□□ -0.85
PCDHGC3-204ENST00000617222 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
PCDHGC3-204ENST00000617222 LBHQ53QV2 105 aaPredicted RBP9.75□□□□□ -0.85
PCDHGC3-204ENST00000617222 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
PCDHGC3-204ENST00000617222 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
PCDHGC3-204ENST00000617222 SRSF9Q13242 221 aaKnown RBP eCLIP9.74□□□□□ -0.85
PCDHGC3-204ENST00000617222 Q6ZVH6 145 aa9.74□□□□□ -0.85
PCDHGC3-204ENST00000617222 KRTAP17-1Q9BYP8 105 aa9.74□□□□□ -0.85
PCDHGC3-204ENST00000617222 UBE2BP63146 152 aa9.73□□□□□ -0.85
PCDHGC3-204ENST00000617222 MUSTN1Q8IVN3 82 aa9.73□□□□□ -0.85
PCDHGC3-204ENST00000617222 LINC00167Q96N53 147 aa9.73□□□□□ -0.85
PCDHGC3-204ENST00000617222 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
PCDHGC3-204ENST00000617222 NCR3O14931 201 aa9.72□□□□□ -0.85
PCDHGC3-204ENST00000617222 IFITM1P13164 125 aa9.72□□□□□ -0.85
PCDHGC3-204ENST00000617222 Q8N1X5 172 aa9.72□□□□□ -0.85
PCDHGC3-204ENST00000617222 SPANXB1Q9NS25 103 aaPredicted RBP9.72□□□□□ -0.85
PCDHGC3-204ENST00000617222 RPL37AP8A6NKH3 93 aa9.71□□□□□ -0.86
PCDHGC3-204ENST00000617222 M0R378 163 aa9.71□□□□□ -0.86
PCDHGC3-204ENST00000617222 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.86
PCDHGC3-204ENST00000617222 NDUFC2O95298 119 aa9.7□□□□□ -0.86
PCDHGC3-204ENST00000617222 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
PCDHGC3-204ENST00000617222 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
PCDHGC3-204ENST00000617222 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
PCDHGC3-204ENST00000617222 HIGD1BQ9P298 99 aa9.7□□□□□ -0.86
PCDHGC3-204ENST00000617222 Q5VSD8 79 aa9.69□□□□□ -0.86
PCDHGC3-204ENST00000617222 HIST1H4GQ99525 98 aa9.69□□□□□ -0.86
PCDHGC3-204ENST00000617222 FAT1Q14517 4588 aa9.68□□□□□ -0.86
PCDHGC3-204ENST00000617222 PRO1933Q9H354 126 aa9.68□□□□□ -0.86
PCDHGC3-204ENST00000617222 UQCR10Q9UDW1 63 aa9.68□□□□□ -0.86
PCDHGC3-204ENST00000617222 PSORS1C2Q9UIG4 136 aa9.68□□□□□ -0.86
PCDHGC3-204ENST00000617222 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
PCDHGC3-204ENST00000617222 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
PCDHGC3-204ENST00000617222 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
PCDHGC3-204ENST00000617222 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-204ENST00000617222 C12orf57Q99622 126 aa9.67□□□□□ -0.86
PCDHGC3-204ENST00000617222 PPDPFQ9H3Y8 114 aa9.67□□□□□ -0.86
PCDHGC3-204ENST00000617222 IGLV1-50A0A075B6I6 118 aa9.66□□□□□ -0.86
PCDHGC3-204ENST00000617222 TRBV10-3A0A0K0K1G6 114 aa9.65□□□□□ -0.86
PCDHGC3-204ENST00000617222 C1orf137Q5JT78 98 aa9.65□□□□□ -0.86
PCDHGC3-204ENST00000617222 S100A7L2Q5SY68 101 aa9.64□□□□□ -0.87
PCDHGC3-204ENST00000617222 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
PCDHGC3-204ENST00000617222 A4D1N5 150 aa9.63□□□□□ -0.87
PCDHGC3-204ENST00000617222 DDTP30046 118 aa9.63□□□□□ -0.87
PCDHGC3-204ENST00000617222 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
PCDHGC3-204ENST00000617222 OR13C6PQ8NH95 151 aa9.63□□□□□ -0.87
PCDHGC3-204ENST00000617222 HERC2O95714 4834 aa9.63□□□□□ -0.87
PCDHGC3-204ENST00000617222 TAL2Q16559 108 aa9.62□□□□□ -0.87
PCDHGC3-204ENST00000617222 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
PCDHGC3-204ENST00000617222 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
PCDHGC3-204ENST00000617222 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-204ENST00000617222 LINC00337Q8N6G1 96 aa9.61□□□□□ -0.87
PCDHGC3-204ENST00000617222 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
PCDHGC3-204ENST00000617222 CEND1Q8N111 149 aa9.6□□□□□ -0.87
PCDHGC3-204ENST00000617222 KCNQ1DNQ9H478 68 aa9.6□□□□□ -0.87
PCDHGC3-204ENST00000617222 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
PCDHGC3-204ENST00000617222 A6NDN8 102 aa9.58□□□□□ -0.88
PCDHGC3-204ENST00000617222 PRYO14603 147 aa9.58□□□□□ -0.88
PCDHGC3-204ENST00000617222 BCE1O60756 84 aa9.58□□□□□ -0.88
PCDHGC3-204ENST00000617222 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
PCDHGC3-204ENST00000617222 HSD52Q0P140 79 aa9.58□□□□□ -0.88
PCDHGC3-204ENST00000617222 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
PCDHGC3-204ENST00000617222 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
PCDHGC3-204ENST00000617222 TSTD3H0UI37 97 aa9.56□□□□□ -0.88
PCDHGC3-204ENST00000617222 TRAV23DV6A0A075B6W5 121 aa9.55□□□□□ -0.88
PCDHGC3-204ENST00000617222 FXYD2P54710 66 aa9.55□□□□□ -0.88
PCDHGC3-204ENST00000617222 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
PCDHGC3-204ENST00000617222 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
PCDHGC3-204ENST00000617222 CFC1P0CG37 223 aa9.54□□□□□ -0.88
PCDHGC3-204ENST00000617222 SPRR1AP35321 89 aa9.54□□□□□ -0.88
PCDHGC3-204ENST00000617222 UBE2AP49459 152 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms