RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-231ENST00000616390 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
CACNA1C-231ENST00000616390 A0A087WYN8 130 aa9.55□□□□□ -0.88
CACNA1C-231ENST00000616390 SERP1Q9Y6X1 66 aa9.55□□□□□ -0.88
CACNA1C-231ENST00000616390 ATOX1O00244 68 aa9.54□□□□□ -0.88
CACNA1C-231ENST00000616390 REG3AQ06141 175 aa9.54□□□□□ -0.88
CACNA1C-231ENST00000616390 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-231ENST00000616390 SMIM26A0A096LP01 95 aa9.54□□□□□ -0.88
CACNA1C-231ENST00000616390 STAB1Q9NY15 2570 aa9.54□□□□□ -0.88
CACNA1C-231ENST00000616390 Q6ZRU5 148 aa9.53□□□□□ -0.88
CACNA1C-231ENST00000616390 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
CACNA1C-231ENST00000616390 RPL28P46779 137 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-231ENST00000616390 LINC01600Q96MT4 127 aa9.53□□□□□ -0.88
CACNA1C-231ENST00000616390 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.88
CACNA1C-231ENST00000616390 DNAL4O96015 105 aa9.52□□□□□ -0.88
CACNA1C-231ENST00000616390 FP248Q71RG6 208 aaPredicted RBP9.52□□□□□ -0.88
CACNA1C-231ENST00000616390 SLPIP03973 132 aa9.52□□□□□ -0.89
CACNA1C-231ENST00000616390 Q8NAQ8 132 aa9.52□□□□□ -0.89
CACNA1C-231ENST00000616390 Q8IZM0 81 aa9.51□□□□□ -0.89
CACNA1C-231ENST00000616390 LECT2O14960 151 aa9.5□□□□□ -0.89
CACNA1C-231ENST00000616390 SPART-AS1P0CW21 52 aa9.5□□□□□ -0.89
CACNA1C-231ENST00000616390 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
CACNA1C-231ENST00000616390 CD164L2Q6UWJ8 174 aa9.5□□□□□ -0.89
CACNA1C-231ENST00000616390 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
CACNA1C-231ENST00000616390 HIST1H4AP62805 103 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-231ENST00000616390 MIFP14174 115 aa9.48□□□□□ -0.89
CACNA1C-231ENST00000616390 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
CACNA1C-231ENST00000616390 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-231ENST00000616390 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
CACNA1C-231ENST00000616390 CXCL5P42830 114 aa9.47□□□□□ -0.89
CACNA1C-231ENST00000616390 KIAA0087Q14695 138 aa9.47□□□□□ -0.89
CACNA1C-231ENST00000616390 DEFB121Q5J5C9 76 aa9.47□□□□□ -0.89
CACNA1C-231ENST00000616390 MAST4O15021 2626 aa9.47□□□□□ -0.89
CACNA1C-231ENST00000616390 NCR3O14931 201 aa9.46□□□□□ -0.89
CACNA1C-231ENST00000616390 SERP2Q8N6R1 65 aa9.46□□□□□ -0.89
CACNA1C-231ENST00000616390 TENM3Q9P273 2699 aa9.46□□□□□ -0.89
CACNA1C-231ENST00000616390 ANK2Q01484 3957 aa9.46□□□□□ -0.89
CACNA1C-231ENST00000616390 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
CACNA1C-231ENST00000616390 VPREB1P12018 145 aa9.46□□□□□ -0.9
CACNA1C-231ENST00000616390 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.9
CACNA1C-231ENST00000616390 RBM12B-AS1Q9P1G2 102 aa9.46□□□□□ -0.9
CACNA1C-231ENST00000616390 NOTCH1P46531 2555 aa9.46□□□□□ -0.9
CACNA1C-231ENST00000616390 C14orf132Q9NPU4 83 aa9.45□□□□□ -0.9
CACNA1C-231ENST00000616390 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-231ENST00000616390 H0YGX0 51 aa9.44□□□□□ -0.9
CACNA1C-231ENST00000616390 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
CACNA1C-231ENST00000616390 PRR26Q8N8Z3 221 aa9.44□□□□□ -0.9
CACNA1C-231ENST00000616390 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
CACNA1C-231ENST00000616390 SPAG11BQ08648 103 aa9.42□□□□□ -0.9
CACNA1C-231ENST00000616390 LELP1Q5T871 98 aa9.42□□□□□ -0.9
CACNA1C-231ENST00000616390 Q8NDZ9 215 aa9.42□□□□□ -0.9
CACNA1C-231ENST00000616390 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
CACNA1C-231ENST00000616390 CYSRT1A8MQ03 144 aa9.41□□□□□ -0.9
CACNA1C-231ENST00000616390 ACYP1P07311 99 aa9.4□□□□□ -0.9
CACNA1C-231ENST00000616390 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
CACNA1C-231ENST00000616390 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.9
CACNA1C-231ENST00000616390 S100A7L2Q5SY68 101 aa9.4□□□□□ -0.9
CACNA1C-231ENST00000616390 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
CACNA1C-231ENST00000616390 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.91
CACNA1C-231ENST00000616390 ENHOQ6UWT2 76 aa9.4□□□□□ -0.91
CACNA1C-231ENST00000616390 INAFM2P0DMQ5 153 aa9.39□□□□□ -0.91
CACNA1C-231ENST00000616390 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
CACNA1C-231ENST00000616390 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
CACNA1C-231ENST00000616390 Q6ZTC4 211 aa9.38□□□□□ -0.91
CACNA1C-231ENST00000616390 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
CACNA1C-231ENST00000616390 C6orf99Q4VX62 202 aa9.38□□□□□ -0.91
CACNA1C-231ENST00000616390 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
CACNA1C-231ENST00000616390 COX17Q14061 63 aa9.37□□□□□ -0.91
CACNA1C-231ENST00000616390 KPRPQ5T749 579 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-231ENST00000616390 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
CACNA1C-231ENST00000616390 ORMDL1Q9P0S3 153 aa9.37□□□□□ -0.91
CACNA1C-231ENST00000616390 TRBV7-6A0A0J9YX20 115 aa9.36□□□□□ -0.91
CACNA1C-231ENST00000616390 USP17L23D6RBM5 183 aa9.36□□□□□ -0.91
CACNA1C-231ENST00000616390 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
CACNA1C-231ENST00000616390 COL6A5A8TX70 2615 aa9.34□□□□□ -0.91
CACNA1C-231ENST00000616390 Q8N814 137 aa9.34□□□□□ -0.91
CACNA1C-231ENST00000616390 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
CACNA1C-231ENST00000616390 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 PRB2P02812 416 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
CACNA1C-231ENST00000616390 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
CACNA1C-231ENST00000616390 ESRGQ1W209 222 aa9.3□□□□□ -0.92
CACNA1C-231ENST00000616390 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
CACNA1C-231ENST00000616390 NBEAL1Q6ZS30 2694 aa9.29□□□□□ -0.92
CACNA1C-231ENST00000616390 CMYA5Q8N3K9 4069 aa9.27□□□□□ -0.92
CACNA1C-231ENST00000616390 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.93
CACNA1C-231ENST00000616390 DEFB131BA0A096LNP1 70 aa9.27□□□□□ -0.93
CACNA1C-231ENST00000616390 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
CACNA1C-231ENST00000616390 TMEM256-PLSCR3K7ERE1 68 aa9.27□□□□□ -0.93
CACNA1C-231ENST00000616390 CCKP06307 115 aa9.27□□□□□ -0.93
CACNA1C-231ENST00000616390 OBSCN-AS1Q96MR7 158 aa9.27□□□□□ -0.93
CACNA1C-231ENST00000616390 LINC00575Q6W349 94 aa9.25□□□□□ -0.93
CACNA1C-231ENST00000616390 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
CACNA1C-231ENST00000616390 RBM3P98179 157 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-231ENST00000616390 A0A087WVE0 104 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms