RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SMAD5-AS1Q9Y6J3 95 aa6.61□□□□□ -1.35
COL12A1-211ENST00000615798 BDP1A6H8Y1 2624 aa6.61□□□□□ -1.35
COL12A1-211ENST00000615798 LYPD5Q6UWN5 251 aa6.61□□□□□ -1.35
COL12A1-211ENST00000615798 NAV2Q8IVL1 2488 aa6.61□□□□□ -1.35
COL12A1-211ENST00000615798 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
COL12A1-211ENST00000615798 C9orf129Q5T035 196 aaKnown RBP6.61□□□□□ -1.35
COL12A1-211ENST00000615798 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
COL12A1-211ENST00000615798 Q6ZSV7 163 aa6.6□□□□□ -1.35
COL12A1-211ENST00000615798 Q6YL49 198 aa6.6□□□□□ -1.35
COL12A1-211ENST00000615798 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
COL12A1-211ENST00000615798 LINC00242Q5T6M2 205 aa6.59□□□□□ -1.35
COL12A1-211ENST00000615798 SMIM1B2RUZ4 78 aa6.59□□□□□ -1.35
COL12A1-211ENST00000615798 PRO0461Q9UI25 63 aa6.59□□□□□ -1.35
COL12A1-211ENST00000615798 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.36
COL12A1-211ENST00000615798 LINC00483Q53H64 154 aa6.58□□□□□ -1.36
COL12A1-211ENST00000615798 Q6ZQT0 140 aa6.57□□□□□ -1.36
COL12A1-211ENST00000615798 MAPK1IP1LQ8NDC0 245 aa6.57□□□□□ -1.36
COL12A1-211ENST00000615798 URB1-AS1Q96HZ7 61 aa6.57□□□□□ -1.36
COL12A1-211ENST00000615798 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
COL12A1-211ENST00000615798 UNQ6190/PRO20217Q6UXQ8 127 aa6.57□□□□□ -1.36
COL12A1-211ENST00000615798 PROK1P58294 105 aa6.56□□□□□ -1.36
COL12A1-211ENST00000615798 MOBPQ13875 183 aa6.56□□□□□ -1.36
COL12A1-211ENST00000615798 J3QKU1 62 aa6.56□□□□□ -1.36
COL12A1-211ENST00000615798 COL27A1Q8IZC6 1860 aaPredicted RBP6.56□□□□□ -1.36
COL12A1-211ENST00000615798 EPG5Q9HCE0 2579 aa6.56□□□□□ -1.36
COL12A1-211ENST00000615798 DEFB114Q30KQ6 69 aa6.56□□□□□ -1.36
COL12A1-211ENST00000615798 AMELXQ99217 191 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 Q8N2B8 174 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 WDR87Q6ZQQ6 2873 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 COX6A2Q02221 97 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 C1orf134Q5TEV5 83 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 C6orf223Q8N319 242 aa6.55□□□□□ -1.36
COL12A1-211ENST00000615798 KLK9Q2XQG4 91 aa6.54□□□□□ -1.36
COL12A1-211ENST00000615798 CHTF8P0CG12 524 aa6.54□□□□□ -1.36
COL12A1-211ENST00000615798 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
COL12A1-211ENST00000615798 LINC00337Q8N6G1 96 aa6.54□□□□□ -1.36
COL12A1-211ENST00000615798 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
COL12A1-211ENST00000615798 BBC3Q96PG8 261 aaPredicted RBP6.53□□□□□ -1.36
COL12A1-211ENST00000615798 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.37
COL12A1-211ENST00000615798 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
COL12A1-211ENST00000615798 LINC01556Q5JQF7 62 aa6.52□□□□□ -1.37
COL12A1-211ENST00000615798 Q8NBF4 154 aa6.52□□□□□ -1.37
COL12A1-211ENST00000615798 LINC00313P59037 77 aa6.52□□□□□ -1.37
COL12A1-211ENST00000615798 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
COL12A1-211ENST00000615798 H7BZZ5 65 aa6.51□□□□□ -1.37
COL12A1-211ENST00000615798 C11orf21Q9P2W6 132 aa6.51□□□□□ -1.37
COL12A1-211ENST00000615798 A0A096LNJ9 63 aa6.5□□□□□ -1.37
COL12A1-211ENST00000615798 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
COL12A1-211ENST00000615798 GAS8-AS1O95177 125 aa6.5□□□□□ -1.37
COL12A1-211ENST00000615798 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
COL12A1-211ENST00000615798 Q6ZRU5 148 aa6.49□□□□□ -1.37
COL12A1-211ENST00000615798 LINC01006Q8NI28 216 aa6.49□□□□□ -1.37
COL12A1-211ENST00000615798 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
COL12A1-211ENST00000615798 A8MWP4 228 aa6.47□□□□□ -1.37
COL12A1-211ENST00000615798 IGLV7-43P04211 117 aa6.47□□□□□ -1.37
COL12A1-211ENST00000615798 A8MTW9 85 aa6.47□□□□□ -1.37
COL12A1-211ENST00000615798 PRR9Q5T870 116 aa6.47□□□□□ -1.37
COL12A1-211ENST00000615798 RPL37AP61513 92 aaKnown RBP6.47□□□□□ -1.37
COL12A1-211ENST00000615798 USP9XQ93008 2570 aaPredicted RBP6.46□□□□□ -1.37
COL12A1-211ENST00000615798 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.38
COL12A1-211ENST00000615798 Q75L30 129 aa6.46□□□□□ -1.38
COL12A1-211ENST00000615798 CDSNQ15517 529 aa6.46□□□□□ -1.38
COL12A1-211ENST00000615798 TRBV7-4A0A0J9YYF1 115 aa6.45□□□□□ -1.38
COL12A1-211ENST00000615798 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
COL12A1-211ENST00000615798 PIEZO2Q9H5I5 2752 aa6.44□□□□□ -1.38
COL12A1-211ENST00000615798 A0A1B0GUV1 79 aa6.44□□□□□ -1.38
COL12A1-211ENST00000615798 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
COL12A1-211ENST00000615798 USP24Q9UPU5 2620 aa6.44□□□□□ -1.38
COL12A1-211ENST00000615798 IGF2RP11717 2491 aa6.43□□□□□ -1.38
COL12A1-211ENST00000615798 IGLV5-52A0A0A0MRZ9 124 aa6.43□□□□□ -1.38
COL12A1-211ENST00000615798 LY6G6DO95868 133 aa6.43□□□□□ -1.38
COL12A1-211ENST00000615798 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
COL12A1-211ENST00000615798 ANKRD11Q6UB99 2663 aaPredicted RBP6.42□□□□□ -1.38
COL12A1-211ENST00000615798 IGLV5-39A0A0G2JS06 123 aa6.42□□□□□ -1.38
COL12A1-211ENST00000615798 KIF25-AS1Q9Y6Z4 181 aa6.42□□□□□ -1.38
COL12A1-211ENST00000615798 PLA2G5P39877 138 aa6.41□□□□□ -1.38
COL12A1-211ENST00000615798 CEP295Q9C0D2 2601 aa6.41□□□□□ -1.38
COL12A1-211ENST00000615798 ANKRD17O75179 2603 aaKnown RBP6.4□□□□□ -1.38
COL12A1-211ENST00000615798 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
COL12A1-211ENST00000615798 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.39
COL12A1-211ENST00000615798 CHD8Q9HCK8 2581 aa6.39□□□□□ -1.39
COL12A1-211ENST00000615798 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
COL12A1-211ENST00000615798 C16orf95Q9H693 158 aa6.39□□□□□ -1.39
COL12A1-211ENST00000615798 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
COL12A1-211ENST00000615798 IGLV1-51P01701 117 aa6.38□□□□□ -1.39
COL12A1-211ENST00000615798 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
COL12A1-211ENST00000615798 FASNP49327 2511 aaKnown RBP6.38□□□□□ -1.39
COL12A1-211ENST00000615798 A0A0D9SG42 100 aa6.38□□□□□ -1.39
COL12A1-211ENST00000615798 IGLV4-60A0A075B6I1 120 aa6.38□□□□□ -1.39
COL12A1-211ENST00000615798 FAM104AQ969W3 186 aa6.37□□□□□ -1.39
COL12A1-211ENST00000615798 M0R2N4 97 aa6.36□□□□□ -1.39
COL12A1-211ENST00000615798 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
COL12A1-211ENST00000615798 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
COL12A1-211ENST00000615798 JMJD1CQ15652 2540 aa6.36□□□□□ -1.39
COL12A1-211ENST00000615798 K7EQZ3 153 aa6.36□□□□□ -1.39
COL12A1-211ENST00000615798 Q96NJ1 140 aa6.34□□□□□ -1.39
COL12A1-211ENST00000615798 LINC00315P59091 139 aa6.34□□□□□ -1.39
COL12A1-211ENST00000615798 Q6ZRX8 168 aa6.34□□□□□ -1.39
COL12A1-211ENST00000615798 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms