RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SRSF9Q13242 221 aaKnown RBP eCLIP9.32□□□□□ -0.92
CD48-203ENST00000613788 ARL17AQ8IVW1 177 aa9.32□□□□□ -0.92
CD48-203ENST00000613788 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
CD48-203ENST00000613788 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
CD48-203ENST00000613788 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
CD48-203ENST00000613788 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
CD48-203ENST00000613788 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
CD48-203ENST00000613788 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
CD48-203ENST00000613788 HIGD1BQ9P298 99 aa9.31□□□□□ -0.92
CD48-203ENST00000613788 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
CD48-203ENST00000613788 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
CD48-203ENST00000613788 IFITM1P13164 125 aa9.31□□□□□ -0.92
CD48-203ENST00000613788 LINC00308Q8TCZ7 52 aa9.31□□□□□ -0.92
CD48-203ENST00000613788 PLAC8Q9NZF1 115 aa9.31□□□□□ -0.92
CD48-203ENST00000613788 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
CD48-203ENST00000613788 NPC2P61916 151 aa9.3□□□□□ -0.92
CD48-203ENST00000613788 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
CD48-203ENST00000613788 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
CD48-203ENST00000613788 EPM2AB3EWF7 344 aa9.29□□□□□ -0.92
CD48-203ENST00000613788 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
CD48-203ENST00000613788 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
CD48-203ENST00000613788 HIST1H4GQ99525 98 aa9.29□□□□□ -0.92
CD48-203ENST00000613788 PRO1933Q9H354 126 aa9.29□□□□□ -0.92
CD48-203ENST00000613788 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
CD48-203ENST00000613788 SOSTDC1Q6X4U4 206 aa9.28□□□□□ -0.92
CD48-203ENST00000613788 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
CD48-203ENST00000613788 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
CD48-203ENST00000613788 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
CD48-203ENST00000613788 XGP55808 180 aa9.27□□□□□ -0.93
CD48-203ENST00000613788 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
CD48-203ENST00000613788 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
CD48-203ENST00000613788 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 NDUFC2O95298 119 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 VPREB1P12018 145 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 M0QXV9 152 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
CD48-203ENST00000613788 HAMPP81172 84 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 LBHQ53QV2 105 aaPredicted RBP9.26□□□□□ -0.93
CD48-203ENST00000613788 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
CD48-203ENST00000613788 DDTP30046 118 aa9.25□□□□□ -0.93
CD48-203ENST00000613788 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
CD48-203ENST00000613788 TAL2Q16559 108 aa9.25□□□□□ -0.93
CD48-203ENST00000613788 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
CD48-203ENST00000613788 Q8NDZ9 215 aa9.24□□□□□ -0.93
CD48-203ENST00000613788 M0R378 163 aa9.23□□□□□ -0.93
CD48-203ENST00000613788 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
CD48-203ENST00000613788 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
CD48-203ENST00000613788 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
CD48-203ENST00000613788 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
CD48-203ENST00000613788 NCR3O14931 201 aa9.21□□□□□ -0.93
CD48-203ENST00000613788 HSD52Q0P140 79 aa9.21□□□□□ -0.93
CD48-203ENST00000613788 C7orf33Q8WU49 177 aa9.21□□□□□ -0.93
CD48-203ENST00000613788 UBE2BP63146 152 aa9.21□□□□□ -0.94
CD48-203ENST00000613788 LINC00167Q96N53 147 aa9.21□□□□□ -0.94
CD48-203ENST00000613788 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
CD48-203ENST00000613788 CEND1Q8N111 149 aa9.2□□□□□ -0.94
CD48-203ENST00000613788 A4D1N5 150 aa9.19□□□□□ -0.94
CD48-203ENST00000613788 IGKV2-28A0A075B6P5 120 aa9.18□□□□□ -0.94
CD48-203ENST00000613788 IGKV2D-28P01615 120 aa9.18□□□□□ -0.94
CD48-203ENST00000613788 S100A7L2Q5SY68 101 aa9.18□□□□□ -0.94
CD48-203ENST00000613788 TMEM238LA0A1B0GVL6 79 aa9.17□□□□□ -0.94
CD48-203ENST00000613788 A6NJY4 79 aa9.17□□□□□ -0.94
CD48-203ENST00000613788 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
CD48-203ENST00000613788 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
CD48-203ENST00000613788 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
CD48-203ENST00000613788 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
CD48-203ENST00000613788 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.94
CD48-203ENST00000613788 TMEM126AQ9H061 195 aa9.15□□□□□ -0.94
CD48-203ENST00000613788 BIRC6Q9NR09 4857 aa9.15□□□□□ -0.94
CD48-203ENST00000613788 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.95
CD48-203ENST00000613788 CBY1Q9Y3M2 126 aa9.15□□□□□ -0.95
CD48-203ENST00000613788 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
CD48-203ENST00000613788 A6NDN8 102 aa9.14□□□□□ -0.95
CD48-203ENST00000613788 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
CD48-203ENST00000613788 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
CD48-203ENST00000613788 RYR1P21817 5038 aa9.13□□□□□ -0.95
CD48-203ENST00000613788 FAM229AH3BQW9 127 aa9.13□□□□□ -0.95
CD48-203ENST00000613788 FXYD2P54710 66 aa9.13□□□□□ -0.95
CD48-203ENST00000613788 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
CD48-203ENST00000613788 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
CD48-203ENST00000613788 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
CD48-203ENST00000613788 HSPG2P98160 4391 aa9.12□□□□□ -0.95
CD48-203ENST00000613788 M0R143 59 aa9.11□□□□□ -0.95
CD48-203ENST00000613788 CFC1BP0CG36 223 aa9.11□□□□□ -0.95
CD48-203ENST00000613788 CFC1P0CG37 223 aa9.11□□□□□ -0.95
CD48-203ENST00000613788 RAB37Q96AX2 223 aa9.11□□□□□ -0.95
CD48-203ENST00000613788 A0A0B4J2C4 111 aa9.1□□□□□ -0.95
CD48-203ENST00000613788 PRYO14603 147 aa9.1□□□□□ -0.95
CD48-203ENST00000613788 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
CD48-203ENST00000613788 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
CD48-203ENST00000613788 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
CD48-203ENST00000613788 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
CD48-203ENST00000613788 KIAA1109Q2LD37 5005 aa9.09□□□□□ -0.95
CD48-203ENST00000613788 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.95
CD48-203ENST00000613788 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
CD48-203ENST00000613788 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
CD48-203ENST00000613788 Q8N1X5 172 aa9.08□□□□□ -0.96
CD48-203ENST00000613788 NHP2Q9NX24 153 aaKnown RBP9.08□□□□□ -0.96
CD48-203ENST00000613788 BCE1O60756 84 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms