RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CEP295Q9C0D2 2601 aa7.73□□□□□ -1.17
CNTNAP3B-211ENST00000612828 HIGD1BQ9P298 99 aa7.73□□□□□ -1.17
CNTNAP3B-211ENST00000612828 MIR22HGQ0VDD5 57 aa7.72□□□□□ -1.17
CNTNAP3B-211ENST00000612828 OBSCN-AS1Q96MR7 158 aa7.72□□□□□ -1.17
CNTNAP3B-211ENST00000612828 TLN1Q9Y490 2541 aaKnown RBP7.72□□□□□ -1.17
CNTNAP3B-211ENST00000612828 C10orf142B7Z368 130 aa7.72□□□□□ -1.17
CNTNAP3B-211ENST00000612828 C4orf26Q17RF5 130 aa7.71□□□□□ -1.17
CNTNAP3B-211ENST00000612828 LINC00336Q6ZUF6 198 aa7.71□□□□□ -1.17
CNTNAP3B-211ENST00000612828 URB1-AS1Q96HZ7 61 aa7.71□□□□□ -1.17
CNTNAP3B-211ENST00000612828 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.17
CNTNAP3B-211ENST00000612828 LINC00574Q9H8X3 128 aa7.71□□□□□ -1.17
CNTNAP3B-211ENST00000612828 Q8NA96 180 aa7.71□□□□□ -1.18
CNTNAP3B-211ENST00000612828 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
CNTNAP3B-211ENST00000612828 NAV2Q8IVL1 2488 aa7.7□□□□□ -1.18
CNTNAP3B-211ENST00000612828 TLN2Q9Y4G6 2542 aa7.7□□□□□ -1.18
CNTNAP3B-211ENST00000612828 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
CNTNAP3B-211ENST00000612828 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
CNTNAP3B-211ENST00000612828 CEP350Q5VT06 3117 aa7.69□□□□□ -1.18
CNTNAP3B-211ENST00000612828 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
CNTNAP3B-211ENST00000612828 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
CNTNAP3B-211ENST00000612828 AMELXQ99217 191 aa7.68□□□□□ -1.18
CNTNAP3B-211ENST00000612828 C11orf21Q9P2W6 132 aa7.68□□□□□ -1.18
CNTNAP3B-211ENST00000612828 PRO3102Q9H379 93 aa7.67□□□□□ -1.18
CNTNAP3B-211ENST00000612828 Q6YL49 198 aa7.67□□□□□ -1.18
CNTNAP3B-211ENST00000612828 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
CNTNAP3B-211ENST00000612828 UQCR11O14957 56 aa7.66□□□□□ -1.18
CNTNAP3B-211ENST00000612828 IGLV1-50A0A075B6I6 118 aa7.65□□□□□ -1.18
CNTNAP3B-211ENST00000612828 RTL8CO15255 209 aa7.65□□□□□ -1.18
CNTNAP3B-211ENST00000612828 Q6ZRU5 148 aa7.65□□□□□ -1.18
CNTNAP3B-211ENST00000612828 DSCR10P59022 87 aa7.65□□□□□ -1.19
CNTNAP3B-211ENST00000612828 ODF3BA8MYP8 253 aa7.64□□□□□ -1.19
CNTNAP3B-211ENST00000612828 MRPL34Q9BQ48 92 aaKnown RBP7.64□□□□□ -1.19
CNTNAP3B-211ENST00000612828 PRR9Q5T870 116 aa7.63□□□□□ -1.19
CNTNAP3B-211ENST00000612828 UTRNP46939 3433 aa7.63□□□□□ -1.19
CNTNAP3B-211ENST00000612828 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
CNTNAP3B-211ENST00000612828 PRORYQ9H606 182 aa7.62□□□□□ -1.19
CNTNAP3B-211ENST00000612828 LMO4P61968 165 aa7.62□□□□□ -1.19
CNTNAP3B-211ENST00000612828 LITAFQ99732 161 aa7.62□□□□□ -1.19
CNTNAP3B-211ENST00000612828 PCSK5Q92824 1860 aa7.62□□□□□ -1.19
CNTNAP3B-211ENST00000612828 ZFYVE26Q68DK2 2539 aa7.61□□□□□ -1.19
CNTNAP3B-211ENST00000612828 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
CNTNAP3B-211ENST00000612828 Q8IZM0 81 aa7.6□□□□□ -1.19
CNTNAP3B-211ENST00000612828 PCNTO95613 3336 aa7.6□□□□□ -1.19
CNTNAP3B-211ENST00000612828 SETD2Q9BYW2 2564 aaPredicted RBP7.6□□□□□ -1.19
CNTNAP3B-211ENST00000612828 Q6ZRP5 223 aa7.6□□□□□ -1.19
CNTNAP3B-211ENST00000612828 Q8N1X5 172 aa7.6□□□□□ -1.19
CNTNAP3B-211ENST00000612828 Q6ZS46 218 aa7.59□□□□□ -1.19
CNTNAP3B-211ENST00000612828 DNAH12Q6ZR08 3092 aa7.59□□□□□ -1.19
CNTNAP3B-211ENST00000612828 M0QY20 66 aa7.59□□□□□ -1.19
CNTNAP3B-211ENST00000612828 PRO0628Q9UI54 55 aa7.59□□□□□ -1.19
CNTNAP3B-211ENST00000612828 EGFEM1PQ0D2K5 195 aa7.58□□□□□ -1.2
CNTNAP3B-211ENST00000612828 LINC01006Q8NI28 216 aa7.58□□□□□ -1.2
CNTNAP3B-211ENST00000612828 A8MWP4 228 aa7.58□□□□□ -1.2
CNTNAP3B-211ENST00000612828 A0A096LNJ9 63 aa7.57□□□□□ -1.2
CNTNAP3B-211ENST00000612828 PRR26Q8N8Z3 221 aa7.57□□□□□ -1.2
CNTNAP3B-211ENST00000612828 IGHV3OR16-9A0A0B4J2B5 98 aa7.57□□□□□ -1.2
CNTNAP3B-211ENST00000612828 C11orf71Q6IPW1 123 aa7.57□□□□□ -1.2
CNTNAP3B-211ENST00000612828 CDSNQ15517 529 aa7.57□□□□□ -1.2
CNTNAP3B-211ENST00000612828 Q6ZSA8 131 aa7.57□□□□□ -1.2
CNTNAP3B-211ENST00000612828 NHLRC4P0CG21 123 aaPredicted RBP7.56□□□□□ -1.2
CNTNAP3B-211ENST00000612828 MUC22E2RYF6 1773 aaPredicted RBP7.56□□□□□ -1.2
CNTNAP3B-211ENST00000612828 CPAMD8Q8IZJ3 1885 aa7.56□□□□□ -1.2
CNTNAP3B-211ENST00000612828 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
CNTNAP3B-211ENST00000612828 EPG5Q9HCE0 2579 aa7.55□□□□□ -1.2
CNTNAP3B-211ENST00000612828 SPINK7P58062 85 aa7.55□□□□□ -1.2
CNTNAP3B-211ENST00000612828 K7EQG2 157 aa7.55□□□□□ -1.2
CNTNAP3B-211ENST00000612828 LTBP2Q14767 1821 aa7.54□□□□□ -1.2
CNTNAP3B-211ENST00000612828 USP9XQ93008 2570 aaPredicted RBP7.54□□□□□ -1.2
CNTNAP3B-211ENST00000612828 FBXL19-AS1Q494R0 122 aa7.54□□□□□ -1.2
CNTNAP3B-211ENST00000612828 USP9YO00507 2555 aaPredicted RBP7.53□□□□□ -1.2
CNTNAP3B-211ENST00000612828 COA5Q86WW8 74 aa7.53□□□□□ -1.2
CNTNAP3B-211ENST00000612828 Q8N2B8 174 aa7.53□□□□□ -1.2
CNTNAP3B-211ENST00000612828 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
CNTNAP3B-211ENST00000612828 Q8NBF4 154 aa7.5□□□□□ -1.21
CNTNAP3B-211ENST00000612828 A8MUN3 132 aa7.5□□□□□ -1.21
CNTNAP3B-211ENST00000612828 IGLV1-40P01703 118 aa7.5□□□□□ -1.21
CNTNAP3B-211ENST00000612828 ZNF580Q9UK33 172 aa7.49□□□□□ -1.21
CNTNAP3B-211ENST00000612828 LINC00476Q8WZB0 136 aa7.48□□□□□ -1.21
CNTNAP3B-211ENST00000612828 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
CNTNAP3B-211ENST00000612828 FHL3Q13643 280 aa7.47□□□□□ -1.21
CNTNAP3B-211ENST00000612828 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
CNTNAP3B-211ENST00000612828 H3BS24 57 aa7.47□□□□□ -1.21
CNTNAP3B-211ENST00000612828 JMJD1CQ15652 2540 aa7.46□□□□□ -1.21
CNTNAP3B-211ENST00000612828 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
CNTNAP3B-211ENST00000612828 PRO0461Q9UI25 63 aa7.46□□□□□ -1.22
CNTNAP3B-211ENST00000612828 PRRC2CQ9Y520 2896 aaKnown RBP7.46□□□□□ -1.22
CNTNAP3B-211ENST00000612828 CHD8Q9HCK8 2581 aa7.46□□□□□ -1.22
CNTNAP3B-211ENST00000612828 A0A1W2PPR1 153 aa7.46□□□□□ -1.22
CNTNAP3B-211ENST00000612828 LINC00315P59091 139 aa7.46□□□□□ -1.22
CNTNAP3B-211ENST00000612828 CD164Q04900 197 aa7.45□□□□□ -1.22
CNTNAP3B-211ENST00000612828 AVPP01185 164 aa7.45□□□□□ -1.22
CNTNAP3B-211ENST00000612828 HRES1P13985 223 aa7.45□□□□□ -1.22
CNTNAP3B-211ENST00000612828 Q6ZSN1 163 aa7.45□□□□□ -1.22
CNTNAP3B-211ENST00000612828 ANKRD11Q6UB99 2663 aaPredicted RBP7.44□□□□□ -1.22
CNTNAP3B-211ENST00000612828 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
CNTNAP3B-211ENST00000612828 IGIPA6NJ69 53 aa7.44□□□□□ -1.22
CNTNAP3B-211ENST00000612828 KLLNB2CW77 178 aa7.44□□□□□ -1.22
CNTNAP3B-211ENST00000612828 Q1T7F1 81 aa7.43□□□□□ -1.22
CNTNAP3B-211ENST00000612828 ANAPC11Q9NYG5 84 aa7.43□□□□□ -1.22
CNTNAP3B-211ENST00000612828 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms