RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 NUPR1O60356 82 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 PRSS2P07478 247 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CXCL5P42830 114 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 MAP1LC3CQ9BXW4 147 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 LINC00474Q9P2X8 69 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 TRBV30A0A0K0K1B3 111 aa4.37□□□□□ -1.71
PTCHD3P1-201ENST00000612350 PLNP26678 52 aa4.37□□□□□ -1.71
PTCHD3P1-201ENST00000612350 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
PTCHD3P1-201ENST00000612350 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SFTA2Q6UW10 78 aa4.37□□□□□ -1.71
PTCHD3P1-201ENST00000612350 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
PTCHD3P1-201ENST00000612350 C11orf86A6NJI1 115 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SMIM1B2RUZ4 78 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SCGB1D1O95968 90 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 TLX1NBP0CAT3 122 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CKS1BP61024 79 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CTAG1AP78358 180 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
PTCHD3P1-201ENST00000612350 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 LOC107984640A0A0U1RRK4 108 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 TSTD3H0UI37 97 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 KRTDAPP60985 99 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 JOSD1Q15040 202 aaPredicted RBP4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 PET117Q6UWS5 81 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 LINC00526Q96FQ7 95 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 TOMM7Q9P0U1 55 aa4.35□□□□□ -1.71
PTCHD3P1-201ENST00000612350 TMEM223A0PJW6 202 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 PCP4L1A6NKN8 68 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 H0Y8G0 127 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SYS1-DBNDD2H3BUS1 97 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 DPM2O94777 84 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 IGKCP01834 107 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SPINK8P0C7L1 97 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
PTCHD3P1-201ENST00000612350 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 HSBP1L1C9JCN9 74 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 NDUFC2-KCTD14E9PQ53 114 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 PTTG1IPP53801 180 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 HERVK_113P61574 105 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 PYY3Q5JQD4 70 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 LINC01545Q5VT33 79 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 Q6ZRP5 223 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
PTCHD3P1-201ENST00000612350 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 COX17Q14061 63 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 C2orf82Q6UX34 121 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 STPG4Q8N801 248 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 VAMP8Q9BV40 100 aa4.32□□□□□ -1.72
PTCHD3P1-201ENST00000612350 A0A096LNI7 61 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 IGKV2-24A0A0C4DH68 120 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 C3orf79P0CE67 100 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 HERV-K104P63124 156 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 RPL18AQ02543 176 aaKnown RBP4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 PLEKHB2Q96CS7 222 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 CDIP1Q9H305 208 aa4.31□□□□□ -1.72
PTCHD3P1-201ENST00000612350 LEPROTO15243 131 aa4.3□□□□□ -1.72
PTCHD3P1-201ENST00000612350 NMUP48645 174 aa4.3□□□□□ -1.72
PTCHD3P1-201ENST00000612350 ZNF625Q96I27 306 aaPredicted RBP4.3□□□□□ -1.72
PTCHD3P1-201ENST00000612350 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
PTCHD3P1-201ENST00000612350 E9PLD3 99 aa4.29□□□□□ -1.72
PTCHD3P1-201ENST00000612350 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
PTCHD3P1-201ENST00000612350 PMCHL2Q9BQD1 86 aa4.29□□□□□ -1.72
PTCHD3P1-201ENST00000612350 J3QQQ9 107 aa4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 NDUFA12Q9UI09 145 aa4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
PTCHD3P1-201ENST00000612350 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
PTCHD3P1-201ENST00000612350 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 DDTP30046 118 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 PFN2P35080 140 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 SPATA45Q537H7 98 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 UQCR10Q9UDW1 63 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
PTCHD3P1-201ENST00000612350 LINC00158P58513 81 aa4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 RPL24P83731 157 aaKnown RBP4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 XAGE1AQ9HD64 81 aa4.25□□□□□ -1.73
PTCHD3P1-201ENST00000612350 IGLV5-37A0A075B6J1 123 aa4.24□□□□□ -1.73
PTCHD3P1-201ENST00000612350 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
PTCHD3P1-201ENST00000612350 M0QXV9 152 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms