RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 VPREB1P12018 145 aa10.36□□□□□ -0.75
SSBP1-215ENST00000612337 BAGE3Q86Y29 109 aa10.36□□□□□ -0.75
SSBP1-215ENST00000612337 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
SSBP1-215ENST00000612337 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
SSBP1-215ENST00000612337 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
SSBP1-215ENST00000612337 ERG28Q9UKR5 140 aa10.35□□□□□ -0.75
SSBP1-215ENST00000612337 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
SSBP1-215ENST00000612337 PRLHP81277 87 aa10.34□□□□□ -0.75
SSBP1-215ENST00000612337 COX17Q14061 63 aa10.34□□□□□ -0.75
SSBP1-215ENST00000612337 CBLN2Q8IUK8 224 aa10.34□□□□□ -0.75
SSBP1-215ENST00000612337 TMEM126AQ9H061 195 aa10.34□□□□□ -0.75
SSBP1-215ENST00000612337 RPL24P83731 157 aaKnown RBP10.33□□□□□ -0.76
SSBP1-215ENST00000612337 FAM19A1Q7Z5A9 133 aa10.33□□□□□ -0.76
SSBP1-215ENST00000612337 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
SSBP1-215ENST00000612337 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
SSBP1-215ENST00000612337 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
SSBP1-215ENST00000612337 RETNLBQ9BQ08 111 aa10.31□□□□□ -0.76
SSBP1-215ENST00000612337 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
SSBP1-215ENST00000612337 M0R378 163 aa10.3□□□□□ -0.76
SSBP1-215ENST00000612337 SFTA2Q6UW10 78 aa10.3□□□□□ -0.76
SSBP1-215ENST00000612337 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
SSBP1-215ENST00000612337 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-215ENST00000612337 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
SSBP1-215ENST00000612337 CTAG1AP78358 180 aa10.29□□□□□ -0.76
SSBP1-215ENST00000612337 Q8NDZ9 215 aa10.29□□□□□ -0.76
SSBP1-215ENST00000612337 SLC7A5P1Q8MH63 180 aa10.28□□□□□ -0.76
SSBP1-215ENST00000612337 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
SSBP1-215ENST00000612337 TRGC2P03986 189 aa10.27□□□□□ -0.77
SSBP1-215ENST00000612337 TPRXLQ17RH7 258 aa10.27□□□□□ -0.77
SSBP1-215ENST00000612337 HSBP1O75506 76 aa10.26□□□□□ -0.77
SSBP1-215ENST00000612337 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
SSBP1-215ENST00000612337 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
SSBP1-215ENST00000612337 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
SSBP1-215ENST00000612337 CDIP1Q9H305 208 aa10.24□□□□□ -0.77
SSBP1-215ENST00000612337 C3orf22Q8N5N4 141 aa10.23□□□□□ -0.77
SSBP1-215ENST00000612337 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
SSBP1-215ENST00000612337 LINC00158P58513 81 aa10.22□□□□□ -0.77
SSBP1-215ENST00000612337 LINC00310P59036 64 aa10.21□□□□□ -0.77
SSBP1-215ENST00000612337 COLCA2A8K830 154 aa10.2□□□□□ -0.78
SSBP1-215ENST00000612337 SERF1AO75920 110 aa10.2□□□□□ -0.78
SSBP1-215ENST00000612337 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
SSBP1-215ENST00000612337 SPAG11AQ6PDA7 123 aa10.19□□□□□ -0.78
SSBP1-215ENST00000612337 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
SSBP1-215ENST00000612337 LEPROTL1O95214 131 aa10.18□□□□□ -0.78
SSBP1-215ENST00000612337 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
SSBP1-215ENST00000612337 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
SSBP1-215ENST00000612337 H0Y8G0 127 aa10.16□□□□□ -0.78
SSBP1-215ENST00000612337 PRYO14603 147 aa10.16□□□□□ -0.78
SSBP1-215ENST00000612337 KRTAP9-2Q9BYQ4 174 aa10.16□□□□□ -0.78
SSBP1-215ENST00000612337 ATP6V1G1O75348 118 aa10.15□□□□□ -0.78
SSBP1-215ENST00000612337 SMIM13P0DJ93 91 aa10.15□□□□□ -0.78
SSBP1-215ENST00000612337 BOD1L2Q8IYS8 172 aa10.15□□□□□ -0.78
SSBP1-215ENST00000612337 HERV-K104P63124 156 aa10.14□□□□□ -0.79
SSBP1-215ENST00000612337 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
SSBP1-215ENST00000612337 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
SSBP1-215ENST00000612337 FABP4P15090 132 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 PLNP26678 52 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 SPRR1AP35321 89 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-215ENST00000612337 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 KCNQ1DNQ9H478 68 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 NDUFA12Q9UI09 145 aa10.13□□□□□ -0.79
SSBP1-215ENST00000612337 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
SSBP1-215ENST00000612337 NCR3O14931 201 aa10.12□□□□□ -0.79
SSBP1-215ENST00000612337 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
SSBP1-215ENST00000612337 KRTAP4-16G5E9R7 235 aaPredicted RBP10.11□□□□□ -0.79
SSBP1-215ENST00000612337 LEPROTO15243 131 aa10.1□□□□□ -0.79
SSBP1-215ENST00000612337 DPM2O94777 84 aa10.1□□□□□ -0.79
SSBP1-215ENST00000612337 Q8NBF4 154 aa10.1□□□□□ -0.79
SSBP1-215ENST00000612337 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
SSBP1-215ENST00000612337 ETDCA0A1B0GVM5 59 aa10.09□□□□□ -0.79
SSBP1-215ENST00000612337 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
SSBP1-215ENST00000612337 DAND5Q8N907 189 aa10.09□□□□□ -0.79
SSBP1-215ENST00000612337 TRBV10-3A0A0K0K1G6 114 aa10.08□□□□□ -0.8
SSBP1-215ENST00000612337 PMCHL2Q9BQD1 86 aa10.08□□□□□ -0.8
SSBP1-215ENST00000612337 IGKCP01834 107 aa10.07□□□□□ -0.8
SSBP1-215ENST00000612337 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
SSBP1-215ENST00000612337 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
SSBP1-215ENST00000612337 J3QQQ9 107 aa10.06□□□□□ -0.8
SSBP1-215ENST00000612337 SPINK1P00995 79 aa10.06□□□□□ -0.8
SSBP1-215ENST00000612337 HERVK_113P61574 105 aa10.06□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 S100A12P80511 92 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
SSBP1-215ENST00000612337 NMUP48645 174 aa10.04□□□□□ -0.8
SSBP1-215ENST00000612337 LOC107984156A0A0G2JMH3 177 aa10.03□□□□□ -0.8
SSBP1-215ENST00000612337 B5MCH6 92 aa10.03□□□□□ -0.8
SSBP1-215ENST00000612337 ARL17AQ8IVW1 177 aa10.03□□□□□ -0.8
SSBP1-215ENST00000612337 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms