RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 B5MCH6 92 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 C3orf84H3BNL1 204 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 RPL28P46779 137 aaKnown RBP5.02□□□□□ -1.61
CSDE1-218ENST00000610726 LINC00337Q8N6G1 96 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
CSDE1-218ENST00000610726 M0QXV9 152 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 C4orf48Q5BLP8 95 aa5.02□□□□□ -1.61
CSDE1-218ENST00000610726 NSD1Q96L73 2696 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-218ENST00000610726 BPY2O14599 106 aa5.01□□□□□ -1.61
CSDE1-218ENST00000610726 H0Y9J4 135 aa5.01□□□□□ -1.61
CSDE1-218ENST00000610726 CR1P17927 2039 aa5.01□□□□□ -1.61
CSDE1-218ENST00000610726 A0A087WYN8 130 aa5.01□□□□□ -1.61
CSDE1-218ENST00000610726 KRTAP10-11P60412 298 aa5.01□□□□□ -1.61
CSDE1-218ENST00000610726 LINC01556Q5JQF7 62 aa5.01□□□□□ -1.61
CSDE1-218ENST00000610726 NHLRC4P0CG21 123 aaPredicted RBP5□□□□□ -1.61
CSDE1-218ENST00000610726 C10orf25Q5T742 122 aa5□□□□□ -1.61
CSDE1-218ENST00000610726 DHRS4-AS1Q9P1J3 65 aa5□□□□□ -1.61
CSDE1-218ENST00000610726 IGLV5-45A0A087WSX0 123 aa5□□□□□ -1.61
CSDE1-218ENST00000610726 SPATA3Q8NHX4 192 aa5□□□□□ -1.61
CSDE1-218ENST00000610726 C2orf48Q96LS8 159 aa5□□□□□ -1.61
CSDE1-218ENST00000610726 C7orf33Q8WU49 177 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 PLAC8L1A1L4L8 177 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 ATOX1O00244 68 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 ENHOQ6UWT2 76 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 Q8N814 137 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 UPK3BQ9BT76 320 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 MDFIQ99750 246 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-218ENST00000610726 SOSTDC1Q6X4U4 206 aa4.99□□□□□ -1.61
CSDE1-218ENST00000610726 LINC01561Q8N1V8 128 aa4.98□□□□□ -1.61
CSDE1-218ENST00000610726 NDUFC2O95298 119 aa4.98□□□□□ -1.61
CSDE1-218ENST00000610726 NDUFV3P56181 108 aaKnown RBP4.98□□□□□ -1.61
CSDE1-218ENST00000610726 LINC00474Q9P2X8 69 aa4.98□□□□□ -1.61
CSDE1-218ENST00000610726 H3BNG1 76 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 K7EIL1 84 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 C6orf48Q9UBA6 75 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 ASH1LQ9NR48 2969 aaKnown RBP4.97□□□□□ -1.61
CSDE1-218ENST00000610726 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 LINC00588Q9Y4M8 146 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 IGLV9-49A0A0B4J1Y8 123 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 C1orf134Q5TEV5 83 aa4.97□□□□□ -1.61
CSDE1-218ENST00000610726 IGLV5-52A0A0A0MRZ9 124 aa4.96□□□□□ -1.61
CSDE1-218ENST00000610726 XGP55808 180 aa4.96□□□□□ -1.61
CSDE1-218ENST00000610726 MRPL55Q7Z7F7 128 aaKnown RBP4.96□□□□□ -1.62
CSDE1-218ENST00000610726 REG3GQ6UW15 175 aa4.96□□□□□ -1.62
CSDE1-218ENST00000610726 SPINK6Q6UWN8 80 aa4.96□□□□□ -1.62
CSDE1-218ENST00000610726 ZNF575Q86XF7 245 aa4.96□□□□□ -1.62
CSDE1-218ENST00000610726 APCP25054 2843 aa4.95□□□□□ -1.62
CSDE1-218ENST00000610726 CRYBG3Q68DQ2 2970 aa4.95□□□□□ -1.62
CSDE1-218ENST00000610726 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
CSDE1-218ENST00000610726 MP68P56378 58 aa4.95□□□□□ -1.62
CSDE1-218ENST00000610726 PRLHP81277 87 aa4.94□□□□□ -1.62
CSDE1-218ENST00000610726 SS18L2Q9UHA2 77 aa4.94□□□□□ -1.62
CSDE1-218ENST00000610726 C22orf24Q9Y442 160 aa4.94□□□□□ -1.62
CSDE1-218ENST00000610726 WDFY3Q8IZQ1 3526 aa4.94□□□□□ -1.62
CSDE1-218ENST00000610726 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
CSDE1-218ENST00000610726 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
CSDE1-218ENST00000610726 CELSR2Q9HCU4 2923 aa4.93□□□□□ -1.62
CSDE1-218ENST00000610726 F8WDY8 70 aa4.93□□□□□ -1.62
CSDE1-218ENST00000610726 C1orf137Q5JT78 98 aa4.93□□□□□ -1.62
CSDE1-218ENST00000610726 EIF4EBP3O60516 100 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-218ENST00000610726 DCHS1Q96JQ0 3298 aa4.92□□□□□ -1.62
CSDE1-218ENST00000610726 ATP5EP2Q5VTU8 51 aa4.92□□□□□ -1.62
CSDE1-218ENST00000610726 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 LITAFQ99732 161 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 NF1P21359 2839 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 LAMA5O15230 3695 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 RELNP78509 3460 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 LINC00612Q8N6U2 182 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 LINC00167Q96N53 147 aa4.91□□□□□ -1.62
CSDE1-218ENST00000610726 ZNF706Q9Y5V0 76 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-218ENST00000610726 NBDYA0A0U1RRE5 68 aa4.9□□□□□ -1.62
CSDE1-218ENST00000610726 SMCPP49901 116 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-218ENST00000610726 A0A087WVE0 104 aa4.9□□□□□ -1.63
CSDE1-218ENST00000610726 PRYO14603 147 aa4.9□□□□□ -1.63
CSDE1-218ENST00000610726 DNAH10OSP0CZ25 163 aa4.9□□□□□ -1.63
CSDE1-218ENST00000610726 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
CSDE1-218ENST00000610726 ASPMQ8IZT6 3477 aa4.9□□□□□ -1.63
CSDE1-218ENST00000610726 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
CSDE1-218ENST00000610726 IGKV4-1P06312 121 aa4.89□□□□□ -1.63
CSDE1-218ENST00000610726 Q9BRP9 147 aa4.89□□□□□ -1.63
CSDE1-218ENST00000610726 Q6ZRP5 223 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 DMDP11532 3685 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 SMCR5Q8TEV8 140 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 LINC00846Q9NV44 126 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 CIRBP-AS1Q8TBR5 109 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
CSDE1-218ENST00000610726 A0A087WSZ3 146 aa4.87□□□□□ -1.63
CSDE1-218ENST00000610726 PRR34Q9NV39 138 aa4.87□□□□□ -1.63
CSDE1-218ENST00000610726 HRNRQ86YZ3 2850 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-218ENST00000610726 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.639e-7■■□□□ 11.9
CSDE1-218ENST00000610726 UQCRQO14949 82 aa4.87□□□□□ -1.63
CSDE1-218ENST00000610726 DEFB116Q30KQ4 102 aa4.87□□□□□ -1.63
CSDE1-218ENST00000610726 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
CSDE1-218ENST00000610726 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
CSDE1-218ENST00000610726 GVQW2A0A096LPI5 108 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms