RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
SSBP4-214ENST00000607020 MUC17Q685J3 4493 aa8.8□□□□□ -1
SSBP4-214ENST00000607020 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
SSBP4-214ENST00000607020 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
SSBP4-214ENST00000607020 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
SSBP4-214ENST00000607020 A0A087X002 238 aa8.77□□□□□ -1.01
SSBP4-214ENST00000607020 TMEM223A0PJW6 202 aa8.77□□□□□ -1.01
SSBP4-214ENST00000607020 PLNP26678 52 aa8.77□□□□□ -1.01
SSBP4-214ENST00000607020 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
SSBP4-214ENST00000607020 DPM2O94777 84 aa8.76□□□□□ -1.01
SSBP4-214ENST00000607020 CRYGAP11844 174 aa8.76□□□□□ -1.01
SSBP4-214ENST00000607020 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
SSBP4-214ENST00000607020 TYMSOSQ8TAI1 123 aa8.76□□□□□ -1.01
SSBP4-214ENST00000607020 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
SSBP4-214ENST00000607020 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
SSBP4-214ENST00000607020 IGKCP01834 107 aa8.73□□□□□ -1.01
SSBP4-214ENST00000607020 CTAG1AP78358 180 aa8.73□□□□□ -1.01
SSBP4-214ENST00000607020 SFTA2Q6UW10 78 aa8.73□□□□□ -1.01
SSBP4-214ENST00000607020 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
SSBP4-214ENST00000607020 LBHQ53QV2 105 aaPredicted RBP8.72□□□□□ -1.01
SSBP4-214ENST00000607020 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
SSBP4-214ENST00000607020 ZNF625Q96I27 306 aaPredicted RBP8.72□□□□□ -1.01
SSBP4-214ENST00000607020 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
SSBP4-214ENST00000607020 C3orf79P0CE67 100 aa8.71□□□□□ -1.02
SSBP4-214ENST00000607020 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
SSBP4-214ENST00000607020 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
SSBP4-214ENST00000607020 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
SSBP4-214ENST00000607020 KRTDAPP60985 99 aa8.7□□□□□ -1.02
SSBP4-214ENST00000607020 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
SSBP4-214ENST00000607020 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
SSBP4-214ENST00000607020 BCE1O60756 84 aa8.69□□□□□ -1.02
SSBP4-214ENST00000607020 HERVK_113P61574 105 aa8.69□□□□□ -1.02
SSBP4-214ENST00000607020 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
SSBP4-214ENST00000607020 ERG28Q9UKR5 140 aa8.69□□□□□ -1.02
SSBP4-214ENST00000607020 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 LEPROTO15243 131 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 S100A6P06703 90 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 PFN2P35080 140 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 COX17Q14061 63 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
SSBP4-214ENST00000607020 TSPEAR-AS2P59090 65 aa8.67□□□□□ -1.02
SSBP4-214ENST00000607020 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
SSBP4-214ENST00000607020 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
SSBP4-214ENST00000607020 J3QQQ9 107 aa8.66□□□□□ -1.02
SSBP4-214ENST00000607020 S100A2P29034 98 aa8.66□□□□□ -1.02
SSBP4-214ENST00000607020 HERV-K104P63124 156 aa8.66□□□□□ -1.02
SSBP4-214ENST00000607020 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
SSBP4-214ENST00000607020 HIST1H2BLQ99880 126 aa8.66□□□□□ -1.02
SSBP4-214ENST00000607020 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.02
SSBP4-214ENST00000607020 C20orf202A1L168 122 aa8.65□□□□□ -1.02
SSBP4-214ENST00000607020 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
SSBP4-214ENST00000607020 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.02
SSBP4-214ENST00000607020 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
SSBP4-214ENST00000607020 E9PLD3 99 aa8.64□□□□□ -1.03
SSBP4-214ENST00000607020 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
SSBP4-214ENST00000607020 NMUP48645 174 aa8.63□□□□□ -1.03
SSBP4-214ENST00000607020 LINC00158P58513 81 aa8.63□□□□□ -1.03
SSBP4-214ENST00000607020 SNRPEP62304 92 aaKnown RBP8.63□□□□□ -1.03
SSBP4-214ENST00000607020 MEIG1Q5JSS6 88 aa8.63□□□□□ -1.03
SSBP4-214ENST00000607020 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
SSBP4-214ENST00000607020 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-214ENST00000607020 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
SSBP4-214ENST00000607020 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
SSBP4-214ENST00000607020 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
SSBP4-214ENST00000607020 LINC00587B1AMM8 73 aa8.61□□□□□ -1.03
SSBP4-214ENST00000607020 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
SSBP4-214ENST00000607020 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
SSBP4-214ENST00000607020 AKR1D1P51857 326 aa8.6□□□□□ -1.03
SSBP4-214ENST00000607020 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
SSBP4-214ENST00000607020 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
SSBP4-214ENST00000607020 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
SSBP4-214ENST00000607020 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
SSBP4-214ENST00000607020 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
SSBP4-214ENST00000607020 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
SSBP4-214ENST00000607020 VPREB1P12018 145 aa8.57□□□□□ -1.04
SSBP4-214ENST00000607020 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
SSBP4-214ENST00000607020 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
SSBP4-214ENST00000607020 RPL37AP8A6NKH3 93 aa8.56□□□□□ -1.04
SSBP4-214ENST00000607020 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
SSBP4-214ENST00000607020 Q8NDZ9 215 aa8.56□□□□□ -1.04
SSBP4-214ENST00000607020 GAGE10A6NGK3 116 aa8.55□□□□□ -1.04
SSBP4-214ENST00000607020 UBE2AP49459 152 aa8.55□□□□□ -1.04
SSBP4-214ENST00000607020 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
SSBP4-214ENST00000607020 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
SSBP4-214ENST00000607020 DAND5Q8N907 189 aa8.54□□□□□ -1.04
SSBP4-214ENST00000607020 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
SSBP4-214ENST00000607020 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
SSBP4-214ENST00000607020 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
SSBP4-214ENST00000607020 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
SSBP4-214ENST00000607020 LOC107984156A0A0G2JMH3 177 aa8.52□□□□□ -1.05
SSBP4-214ENST00000607020 ARL17AQ8IVW1 177 aa8.52□□□□□ -1.05
SSBP4-214ENST00000607020 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
SSBP4-214ENST00000607020 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
SSBP4-214ENST00000607020 ADAMTSL4-AS1Q5T5F5 129 aa8.51□□□□□ -1.05
SSBP4-214ENST00000607020 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
SSBP4-214ENST00000607020 IGKV2-28A0A075B6P5 120 aa8.5□□□□□ -1.05
SSBP4-214ENST00000607020 TIMM17BO60830 172 aa8.5□□□□□ -1.05
SSBP4-214ENST00000607020 SCGB1D1O95968 90 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms