RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 PLNP26678 52 aa10.09□□□□□ -0.79
LINC00240-203ENST00000606878 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
LINC00240-203ENST00000606878 ATP6V1G1O75348 118 aa10.08□□□□□ -0.8
LINC00240-203ENST00000606878 DPM2O94777 84 aa10.08□□□□□ -0.8
LINC00240-203ENST00000606878 RPL24P83731 157 aaKnown RBP10.08□□□□□ -0.8
LINC00240-203ENST00000606878 GAGE10A6NGK3 116 aa10.07□□□□□ -0.8
LINC00240-203ENST00000606878 RPL37AP8A6NKH3 93 aa10.07□□□□□ -0.8
LINC00240-203ENST00000606878 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
LINC00240-203ENST00000606878 LINC00587B1AMM8 73 aa10.06□□□□□ -0.8
LINC00240-203ENST00000606878 H0Y9J4 135 aa10.06□□□□□ -0.8
LINC00240-203ENST00000606878 HERV-K104P63124 156 aa10.06□□□□□ -0.8
LINC00240-203ENST00000606878 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 ZNF861PO60384 105 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 IGKCP01834 107 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 HERVK_113P61574 105 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
LINC00240-203ENST00000606878 LEPROTO15243 131 aa10.04□□□□□ -0.8
LINC00240-203ENST00000606878 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
LINC00240-203ENST00000606878 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
LINC00240-203ENST00000606878 BCE1O60756 84 aa10.03□□□□□ -0.8
LINC00240-203ENST00000606878 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
LINC00240-203ENST00000606878 VPREB1P12018 145 aa10.03□□□□□ -0.8
LINC00240-203ENST00000606878 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
LINC00240-203ENST00000606878 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
LINC00240-203ENST00000606878 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
LINC00240-203ENST00000606878 J3QQQ9 107 aa10□□□□□ -0.81
LINC00240-203ENST00000606878 IGLV1-50A0A075B6I6 118 aa9.99□□□□□ -0.81
LINC00240-203ENST00000606878 IGKV2-28A0A075B6P5 120 aa9.99□□□□□ -0.81
LINC00240-203ENST00000606878 IGKV2D-28P01615 120 aa9.99□□□□□ -0.81
LINC00240-203ENST00000606878 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
LINC00240-203ENST00000606878 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
LINC00240-203ENST00000606878 S100A1P23297 94 aa9.98□□□□□ -0.81
LINC00240-203ENST00000606878 NMUP48645 174 aa9.98□□□□□ -0.81
LINC00240-203ENST00000606878 TSPEAR-AS2P59090 65 aa9.98□□□□□ -0.81
LINC00240-203ENST00000606878 COA6Q5JTJ3 125 aaKnown RBP9.98□□□□□ -0.81
LINC00240-203ENST00000606878 PET117Q6UWS5 81 aa9.98□□□□□ -0.81
LINC00240-203ENST00000606878 UBE2AP49459 152 aa9.97□□□□□ -0.81
LINC00240-203ENST00000606878 BOD1L2Q8IYS8 172 aa9.97□□□□□ -0.81
LINC00240-203ENST00000606878 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
LINC00240-203ENST00000606878 M0R378 163 aa9.96□□□□□ -0.82
LINC00240-203ENST00000606878 Q8NDZ9 215 aa9.96□□□□□ -0.82
LINC00240-203ENST00000606878 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
LINC00240-203ENST00000606878 LINC01545Q5VT33 79 aa9.95□□□□□ -0.82
LINC00240-203ENST00000606878 E9PLD3 99 aa9.94□□□□□ -0.82
LINC00240-203ENST00000606878 TNXBP22105 4242 aa9.94□□□□□ -0.82
LINC00240-203ENST00000606878 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
LINC00240-203ENST00000606878 TMEM126AQ9H061 195 aa9.93□□□□□ -0.82
LINC00240-203ENST00000606878 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
LINC00240-203ENST00000606878 C3orf79P0CE67 100 aa9.92□□□□□ -0.82
LINC00240-203ENST00000606878 RPL13AP40429 203 aaKnown RBP9.92□□□□□ -0.82
LINC00240-203ENST00000606878 FAM19A1Q7Z5A9 133 aa9.92□□□□□ -0.82
LINC00240-203ENST00000606878 KRTDAPP60985 99 aa9.91□□□□□ -0.82
LINC00240-203ENST00000606878 KRTAP13-1Q8IUC0 172 aa9.91□□□□□ -0.82
LINC00240-203ENST00000606878 DAND5Q8N907 189 aa9.91□□□□□ -0.82
LINC00240-203ENST00000606878 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
LINC00240-203ENST00000606878 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
LINC00240-203ENST00000606878 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
LINC00240-203ENST00000606878 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
LINC00240-203ENST00000606878 C20orf202A1L168 122 aa9.88□□□□□ -0.83
LINC00240-203ENST00000606878 NCR3O14931 201 aa9.88□□□□□ -0.83
LINC00240-203ENST00000606878 PRLHP81277 87 aa9.88□□□□□ -0.83
LINC00240-203ENST00000606878 CRYGAP11844 174 aa9.87□□□□□ -0.83
LINC00240-203ENST00000606878 S100A12P80511 92 aa9.87□□□□□ -0.83
LINC00240-203ENST00000606878 KCNQ1DNQ9H478 68 aa9.86□□□□□ -0.83
LINC00240-203ENST00000606878 TRBV10-2A0A0K0K1G8 114 aa9.85□□□□□ -0.83
LINC00240-203ENST00000606878 PRYO14603 147 aa9.85□□□□□ -0.83
LINC00240-203ENST00000606878 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
LINC00240-203ENST00000606878 HMCN2Q8NDA2 5059 aa9.85□□□□□ -0.83
LINC00240-203ENST00000606878 TRBV10-3A0A0K0K1G6 114 aa9.84□□□□□ -0.83
LINC00240-203ENST00000606878 AKR1D1P51857 326 aa9.84□□□□□ -0.83
LINC00240-203ENST00000606878 NDUFC2O95298 119 aa9.83□□□□□ -0.84
LINC00240-203ENST00000606878 HIGD2AQ9BW72 106 aa9.83□□□□□ -0.84
LINC00240-203ENST00000606878 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
LINC00240-203ENST00000606878 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
LINC00240-203ENST00000606878 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
LINC00240-203ENST00000606878 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
LINC00240-203ENST00000606878 A0A087X002 238 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 TIMM17BO60830 172 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 S100A2P29034 98 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 DDTP30046 118 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 SPRR1AP35321 89 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 NPC2P61916 151 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
LINC00240-203ENST00000606878 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
LINC00240-203ENST00000606878 SOSTDC1Q6X4U4 206 aa9.8□□□□□ -0.84
LINC00240-203ENST00000606878 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
LINC00240-203ENST00000606878 S100A6P06703 90 aa9.79□□□□□ -0.84
LINC00240-203ENST00000606878 HIST3H2BBQ8N257 126 aa9.79□□□□□ -0.84
LINC00240-203ENST00000606878 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
LINC00240-203ENST00000606878 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
LINC00240-203ENST00000606878 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
LINC00240-203ENST00000606878 LITAFQ99732 161 aa9.78□□□□□ -0.84
LINC00240-203ENST00000606878 TTTY13Q9BZ97 58 aa9.78□□□□□ -0.84
LINC00240-203ENST00000606878 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
LINC00240-203ENST00000606878 IGLV6-57P01721 117 aa9.77□□□□□ -0.85
LINC00240-203ENST00000606878 HIST1H2BLQ99880 126 aa9.77□□□□□ -0.85
LINC00240-203ENST00000606878 SNRPEP62304 92 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms