RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 DPM2O94777 84 aa7.75□□□□□ -1.17
SHROOM1-207ENST00000606676 VPREB1P12018 145 aa7.75□□□□□ -1.17
SHROOM1-207ENST00000606676 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
SHROOM1-207ENST00000606676 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
SHROOM1-207ENST00000606676 MAP1LC3CQ9BXW4 147 aa7.75□□□□□ -1.17
SHROOM1-207ENST00000606676 H0Y9J4 135 aa7.74□□□□□ -1.17
SHROOM1-207ENST00000606676 LINC00158P58513 81 aa7.74□□□□□ -1.17
SHROOM1-207ENST00000606676 NKAPP1Q8N9T2 125 aa7.74□□□□□ -1.17
SHROOM1-207ENST00000606676 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
SHROOM1-207ENST00000606676 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
SHROOM1-207ENST00000606676 LEPROTO15243 131 aa7.73□□□□□ -1.17
SHROOM1-207ENST00000606676 IGKCP01834 107 aa7.73□□□□□ -1.17
SHROOM1-207ENST00000606676 SMIM13P0DJ93 91 aa7.73□□□□□ -1.17
SHROOM1-207ENST00000606676 COA6Q5JTJ3 125 aaKnown RBP7.73□□□□□ -1.17
SHROOM1-207ENST00000606676 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
SHROOM1-207ENST00000606676 ZNF861PO60384 105 aa7.72□□□□□ -1.17
SHROOM1-207ENST00000606676 HERV-K104P63124 156 aa7.72□□□□□ -1.17
SHROOM1-207ENST00000606676 BCE1O60756 84 aa7.71□□□□□ -1.18
SHROOM1-207ENST00000606676 KRTAP1-4P0C5Y4 121 aa7.71□□□□□ -1.18
SHROOM1-207ENST00000606676 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.18
SHROOM1-207ENST00000606676 IGLV1-50A0A075B6I6 118 aa7.7□□□□□ -1.18
SHROOM1-207ENST00000606676 IGKV2-28A0A075B6P5 120 aa7.7□□□□□ -1.18
SHROOM1-207ENST00000606676 MYMXA0A1B0GTQ4 84 aa7.7□□□□□ -1.18
SHROOM1-207ENST00000606676 J3QQQ9 107 aa7.7□□□□□ -1.18
SHROOM1-207ENST00000606676 IGKV2D-28P01615 120 aa7.7□□□□□ -1.18
SHROOM1-207ENST00000606676 RPL24P83731 157 aaKnown RBP7.7□□□□□ -1.18
SHROOM1-207ENST00000606676 HERVK_113P61574 105 aa7.69□□□□□ -1.18
SHROOM1-207ENST00000606676 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
SHROOM1-207ENST00000606676 MIR7-3HGQ8N6C7 128 aa7.69□□□□□ -1.18
SHROOM1-207ENST00000606676 LINC00587B1AMM8 73 aa7.68□□□□□ -1.18
SHROOM1-207ENST00000606676 LINC01545Q5VT33 79 aa7.68□□□□□ -1.18
SHROOM1-207ENST00000606676 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
SHROOM1-207ENST00000606676 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
SHROOM1-207ENST00000606676 E9PLD3 99 aa7.67□□□□□ -1.18
SHROOM1-207ENST00000606676 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
SHROOM1-207ENST00000606676 S100A1P23297 94 aa7.67□□□□□ -1.18
SHROOM1-207ENST00000606676 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
SHROOM1-207ENST00000606676 NMUP48645 174 aa7.67□□□□□ -1.18
SHROOM1-207ENST00000606676 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
SHROOM1-207ENST00000606676 TMEM238C9JI98 176 aa7.66□□□□□ -1.18
SHROOM1-207ENST00000606676 ATP6V1G1O75348 118 aa7.66□□□□□ -1.18
SHROOM1-207ENST00000606676 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
SHROOM1-207ENST00000606676 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
SHROOM1-207ENST00000606676 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
SHROOM1-207ENST00000606676 M0R378 163 aa7.65□□□□□ -1.18
SHROOM1-207ENST00000606676 DAND5Q8N907 189 aa7.65□□□□□ -1.18
SHROOM1-207ENST00000606676 LOC107984156A0A0G2JMH3 177 aa7.64□□□□□ -1.19
SHROOM1-207ENST00000606676 ARL17AQ8IVW1 177 aa7.64□□□□□ -1.19
SHROOM1-207ENST00000606676 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
SHROOM1-207ENST00000606676 UBE2AP49459 152 aa7.63□□□□□ -1.19
SHROOM1-207ENST00000606676 NCR3O14931 201 aa7.62□□□□□ -1.19
SHROOM1-207ENST00000606676 KRTDAPP60985 99 aa7.62□□□□□ -1.19
SHROOM1-207ENST00000606676 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
SHROOM1-207ENST00000606676 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
SHROOM1-207ENST00000606676 PRLHP81277 87 aa7.61□□□□□ -1.19
SHROOM1-207ENST00000606676 ADAMTSL4-AS1Q5T5F5 129 aa7.61□□□□□ -1.19
SHROOM1-207ENST00000606676 FAM19A1Q7Z5A9 133 aa7.61□□□□□ -1.19
SHROOM1-207ENST00000606676 LRP2P98164 4655 aa7.6□□□□□ -1.19
SHROOM1-207ENST00000606676 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
SHROOM1-207ENST00000606676 A0A087X002 238 aa7.59□□□□□ -1.19
SHROOM1-207ENST00000606676 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
SHROOM1-207ENST00000606676 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
SHROOM1-207ENST00000606676 LITAFQ99732 161 aa7.59□□□□□ -1.19
SHROOM1-207ENST00000606676 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.19
SHROOM1-207ENST00000606676 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
SHROOM1-207ENST00000606676 PRYO14603 147 aa7.58□□□□□ -1.2
SHROOM1-207ENST00000606676 RPL13AP40429 203 aaKnown RBP7.58□□□□□ -1.2
SHROOM1-207ENST00000606676 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
SHROOM1-207ENST00000606676 TTTY13Q9BZ97 58 aa7.58□□□□□ -1.2
SHROOM1-207ENST00000606676 TRBV10-2A0A0K0K1G8 114 aa7.57□□□□□ -1.2
SHROOM1-207ENST00000606676 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
SHROOM1-207ENST00000606676 SPRR1AP35321 89 aa7.57□□□□□ -1.2
SHROOM1-207ENST00000606676 C20orf202A1L168 122 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 NDUFC2O95298 119 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 NPC2P61916 151 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 LINC00337Q8N6G1 96 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 HIST1H2BLQ99880 126 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 MIEN1Q9BRT3 115 aa7.56□□□□□ -1.2
SHROOM1-207ENST00000606676 ZNF815PA8K554 130 aa7.55□□□□□ -1.2
SHROOM1-207ENST00000606676 TIMM17BO60830 172 aa7.55□□□□□ -1.2
SHROOM1-207ENST00000606676 CRYGAP11844 174 aa7.55□□□□□ -1.2
SHROOM1-207ENST00000606676 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
SHROOM1-207ENST00000606676 IGLV6-57P01721 117 aa7.54□□□□□ -1.2
SHROOM1-207ENST00000606676 DDTP30046 118 aa7.54□□□□□ -1.2
SHROOM1-207ENST00000606676 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
SHROOM1-207ENST00000606676 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
SHROOM1-207ENST00000606676 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
SHROOM1-207ENST00000606676 LPAP08519 4548 aa7.53□□□□□ -1.2
SHROOM1-207ENST00000606676 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
SHROOM1-207ENST00000606676 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
SHROOM1-207ENST00000606676 B5MCH6 92 aa7.51□□□□□ -1.21
SHROOM1-207ENST00000606676 S100A2P29034 98 aa7.51□□□□□ -1.21
SHROOM1-207ENST00000606676 AKR1D1P51857 326 aa7.51□□□□□ -1.21
SHROOM1-207ENST00000606676 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
SHROOM1-207ENST00000606676 S100A6P06703 90 aa7.5□□□□□ -1.21
SHROOM1-207ENST00000606676 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
SHROOM1-207ENST00000606676 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
SHROOM1-207ENST00000606676 PCP2Q8IVA1 136 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms